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The map label for this gene is efp [H]

Identifier: 78778411

GI number: 78778411

Start: 27324

End: 27884

Strand: Direct

Name: efp [H]

Synonym: PMT9312_0026

Alternate gene names: 78778411

Gene position: 27324-27884 (Clockwise)

Preceding gene: 78778408

Following gene: 78778412

Centisome position: 1.6

GC content: 38.86

Gene sequence:

>561_bases
ATGATCTCCAGTAACGATTTTCGCACAGGTACCACCATAGAATTGGATGGACAAGTTTGGCGTGTTGTAGAATTTCTACA
TGTCAAGCCTGGTAAGGGTTCTGCTTTCGTGCGAACAAAATTAAAATCAGTTCAAAGCGGCAACGTGGTTGAAAAAACTT
TTCGAGCCGGAGAATCAGTACAGCAGGCTATCCTTGAGAAGTCTAACCTGCAACACACTTATGTGGAGTCTGGAGATTAC
GTTTTTATGGATATGACAAGTTTTGAAGAGACAAGACTTTCCTCTGAACAAATCGGTAAAGGCTCAAAGTATTTGAAAGA
AGGAATGGAGGTTAATGTAATTTTACATAATGGTAAAGTTTTAGAAGTGGAACTTCCAATTTCTATTACTTTGAAAGTTA
CAGAGACTGATCCTGGAGTTAAAGGCGATACTGCTAGTGGGGGCACGAAACCAGCTATTCTAGAAACTGGTGCTCAAGTT
ATGGTTCCTTTATTTATTTCTGTGGGAGAAATGATTAAAGTTGATACACGTAACGACAGTTATCTTGGACGTGAAAATTA
A

Upstream 100 bases:

>100_bases
AATTATGATTGATAAAATTAAGAAAAGTTTGTTCTGATTTGATAAGAATTTTTGCATAGCACTCTTGTAGGTTTATGATC
CTTGGGGATGTAATACAGGA

Downstream 100 bases:

>100_bases
TGGCTATGAAATTAGATCATGAAGACTTAAATCGCTTAATAGAGAAAATCTCTACAAGCGATATTCAAGAATTCTCCCTA
GAGGGAGAAGATTTTAAACT

Product: elongation factor P

Products: NA

Alternate protein names: EF-P [H]

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MISSNDFRTGTTIELDGQVWRVVEFLHVKPGKGSAFVRTKLKSVQSGNVVEKTFRAGESVQQAILEKSNLQHTYVESGDY
VFMDMTSFEETRLSSEQIGKGSKYLKEGMEVNVILHNGKVLEVELPISITLKVTETDPGVKGDTASGGTKPAILETGAQV
MVPLFISVGEMIKVDTRNDSYLGREN

Sequences:

>Translated_186_residues
MISSNDFRTGTTIELDGQVWRVVEFLHVKPGKGSAFVRTKLKSVQSGNVVEKTFRAGESVQQAILEKSNLQHTYVESGDY
VFMDMTSFEETRLSSEQIGKGSKYLKEGMEVNVILHNGKVLEVELPISITLKVTETDPGVKGDTASGGTKPAILETGAQV
MVPLFISVGEMIKVDTRNDSYLGREN
>Mature_186_residues
MISSNDFRTGTTIELDGQVWRVVEFLHVKPGKGSAFVRTKLKSVQSGNVVEKTFRAGESVQQAILEKSNLQHTYVESGDY
VFMDMTSFEETRLSSEQIGKGSKYLKEGMEVNVILHNGKVLEVELPISITLKVTETDPGVKGDTASGGTKPAILETGAQV
MVPLFISVGEMIKVDTRNDSYLGREN

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family [H]

Homologues:

Organism=Escherichia coli, GI1790590, Length=181, Percent_Identity=44.7513812154696, Blast_Score=154, Evalue=2e-39,
Organism=Escherichia coli, GI87082061, Length=190, Percent_Identity=29.4736842105263, Blast_Score=101, Evalue=4e-23,

Paralogues:

None

Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]

EC number: NA

Molecular weight: Translated: 20432; Mature: 20432

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSNDFRTGTTIELDGQVWRVVEFLHVKPGKGSAFVRTKLKSVQSGNVVEKTFRAGESV
CCCCCCCCCCCEEEECCHHEEEEHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHH
QQAILEKSNLQHTYVESGDYVFMDMTSFEETRLSSEQIGKGSKYLKEGMEVNVILHNGKV
HHHHHHHCCCCEEEECCCCEEEEECCCCHHHHCCHHHCCCCHHHHHCCCEEEEEEECCEE
LEVELPISITLKVTETDPGVKGDTASGGTKPAILETGAQVMVPLFISVGEMIKVDTRNDS
EEEEECEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCEEHHHHHCCCCEEEEECCCCC
YLGREN
CCCCCC
>Mature Secondary Structure
MISSNDFRTGTTIELDGQVWRVVEFLHVKPGKGSAFVRTKLKSVQSGNVVEKTFRAGESV
CCCCCCCCCCCEEEECCHHEEEEHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHH
QQAILEKSNLQHTYVESGDYVFMDMTSFEETRLSSEQIGKGSKYLKEGMEVNVILHNGKV
HHHHHHHCCCCEEEECCCCEEEEECCCCHHHHCCHHHCCCCHHHHHCCCEEEEEEECCEE
LEVELPISITLKVTETDPGVKGDTASGGTKPAILETGAQVMVPLFISVGEMIKVDTRNDS
EEEEECEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCEEHHHHHCCCCEEEEECCCCC
YLGREN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA