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The map label for this gene is rsgA [H]

Identifier: 78778404

GI number: 78778404

Start: 20431

End: 21348

Strand: Direct

Name: rsgA [H]

Synonym: PMT9312_0019

Alternate gene names: 78778404

Gene position: 20431-21348 (Clockwise)

Preceding gene: 78778403

Following gene: 78778408

Centisome position: 1.2

GC content: 26.36

Gene sequence:

>918_bases
ATGAAAACTAATAGTAAACATTTAGGTTTAGTTACAAAAAAATTTAATGATTTTTTTTTAGTTGACTTAAAAAATAAAGA
AAACATTGGTAAGAGTAAAAAATTTTTGTGTAAGGTGAAGAAGTCTATAAATTTCAAGGATCAATTTATTTATGTTGGAG
ACGAAGTAATAATTGATAATATTGATTTAAGAAGTAAACGCGCATTAATAACAAGTTTAAAAAAAAGAAAGAATTTATTA
ATCAGACCATCAGTTGCAAATATTTCTAACATATATATTATTTTTTCCGTTAAAGAGCCAGAGTTAAATTTATCTCAAGT
TAATAGGTTTTTGATATCAGCAGAATCGATGGGAGTTGAAGTTTCATTAGTTTTGACAAAGTGTGATTTAATATCAGAGA
AAAAAAGGTCTTTTTTACTAGATAAATTTGGCAAATGGGGTTACCAAACAATTACTTTAAATTTACAGAAACCTAATTAT
TTAAAAAATTTATTAGTTGAGTTAAAGAAAAAAAAGTGTTCTATATTTATGGGCCCATCTGGTGTTGGTAAAACTACTTT
GCTTAATATGATAATTCCAGGTCTTCAAAATATTACTGCTCCAGTTTCTAATAAAATTAAAAGAGGGAAAAACACTACTC
GAAATGTTGAGTTATTTCCTATATCAAGTCAAAGTTACATTGTGGATACCCCTGGTTTTAATATGCAACCTCTAAAGGTT
GATATTAGATTGTTACCAAATCTCTATTCGGAAATATATACACAAGTAATTGATGATGGAATTAGGTGTAAATTTCGTAA
CTGCTTACATTTGAATGATGAGGGCTGTAATTTAAATAAATCTTTTGAAAGATATTCTTTTTATAAAGAAATGATTGAAT
CTTCTAAGAGTCAGTATTATCAAAACCAGGAAGATTAA

Upstream 100 bases:

>100_bases
GGTGAACCAGAAGAAATGGTATTAAATAATTTAAAAGAGATGGGATGTATATTTACACAAATCAAAGAACATGAAAAATT
TTTAAAAATAAAAATATTGA

Downstream 100 bases:

>100_bases
GATTTAAACCACCAGTCAAATCATTCATTCTTTCTTTCATCGTTGTAGTAGATAATTCATGAGCTTTTTGAATAGCTTGT
AAAATATTTTGCTCTATTTT

Product: GTPase EngC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKTNSKHLGLVTKKFNDFFLVDLKNKENIGKSKKFLCKVKKSINFKDQFIYVGDEVIIDNIDLRSKRALITSLKKRKNLL
IRPSVANISNIYIIFSVKEPELNLSQVNRFLISAESMGVEVSLVLTKCDLISEKKRSFLLDKFGKWGYQTITLNLQKPNY
LKNLLVELKKKKCSIFMGPSGVGKTTLLNMIIPGLQNITAPVSNKIKRGKNTTRNVELFPISSQSYIVDTPGFNMQPLKV
DIRLLPNLYSEIYTQVIDDGIRCKFRNCLHLNDEGCNLNKSFERYSFYKEMIESSKSQYYQNQED

Sequences:

>Translated_305_residues
MKTNSKHLGLVTKKFNDFFLVDLKNKENIGKSKKFLCKVKKSINFKDQFIYVGDEVIIDNIDLRSKRALITSLKKRKNLL
IRPSVANISNIYIIFSVKEPELNLSQVNRFLISAESMGVEVSLVLTKCDLISEKKRSFLLDKFGKWGYQTITLNLQKPNY
LKNLLVELKKKKCSIFMGPSGVGKTTLLNMIIPGLQNITAPVSNKIKRGKNTTRNVELFPISSQSYIVDTPGFNMQPLKV
DIRLLPNLYSEIYTQVIDDGIRCKFRNCLHLNDEGCNLNKSFERYSFYKEMIESSKSQYYQNQED
>Mature_305_residues
MKTNSKHLGLVTKKFNDFFLVDLKNKENIGKSKKFLCKVKKSINFKDQFIYVGDEVIIDNIDLRSKRALITSLKKRKNLL
IRPSVANISNIYIIFSVKEPELNLSQVNRFLISAESMGVEVSLVLTKCDLISEKKRSFLLDKFGKWGYQTITLNLQKPNY
LKNLLVELKKKKCSIFMGPSGVGKTTLLNMIIPGLQNITAPVSNKIKRGKNTTRNVELFPISSQSYIVDTPGFNMQPLKV
DIRLLPNLYSEIYTQVIDDGIRCKFRNCLHLNDEGCNLNKSFERYSFYKEMIESSKSQYYQNQED

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=248, Percent_Identity=28.6290322580645, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 35137; Mature: 35137

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNSKHLGLVTKKFNDFFLVDLKNKENIGKSKKFLCKVKKSINFKDQFIYVGDEVIIDN
CCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEC
IDLRSKRALITSLKKRKNLLIRPSVANISNIYIIFSVKEPELNLSQVNRFLISAESMGVE
CCCCHHHHHHHHHHHHCCEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHEEHHHCCEE
VSLVLTKCDLISEKKRSFLLDKFGKWGYQTITLNLQKPNYLKNLLVELKKKKCSIFMGPS
EEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCEEEECCC
GVGKTTLLNMIIPGLQNITAPVSNKIKRGKNTTRNVELFPISSQSYIVDTPGFNMQPLKV
CCCHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEE
DIRLLPNLYSEIYTQVIDDGIRCKFRNCLHLNDEGCNLNKSFERYSFYKEMIESSKSQYY
EEEHHHHHHHHHHHHHHCCCCEEEEECEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHC
QNQED
CCCCC
>Mature Secondary Structure
MKTNSKHLGLVTKKFNDFFLVDLKNKENIGKSKKFLCKVKKSINFKDQFIYVGDEVIIDN
CCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEC
IDLRSKRALITSLKKRKNLLIRPSVANISNIYIIFSVKEPELNLSQVNRFLISAESMGVE
CCCCHHHHHHHHHHHHCCEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHEEHHHCCEE
VSLVLTKCDLISEKKRSFLLDKFGKWGYQTITLNLQKPNYLKNLLVELKKKKCSIFMGPS
EEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCEEEECCC
GVGKTTLLNMIIPGLQNITAPVSNKIKRGKNTTRNVELFPISSQSYIVDTPGFNMQPLKV
CCCHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEE
DIRLLPNLYSEIYTQVIDDGIRCKFRNCLHLNDEGCNLNKSFERYSFYKEMIESSKSQYY
EEEHHHHHHHHHHHHHHCCCCEEEEECEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHC
QNQED
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA