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The map label for this gene is ftsY [H]

Identifier: 78778395

GI number: 78778395

Start: 11818

End: 13110

Strand: Direct

Name: ftsY [H]

Synonym: PMT9312_0010

Alternate gene names: 78778395

Gene position: 11818-13110 (Clockwise)

Preceding gene: 78778394

Following gene: 78778396

Centisome position: 0.69

GC content: 33.1

Gene sequence:

>1293_bases
ATGAAAAATACTGATTCTGATAATTCTCAAGAGTGGGCTGCACAAGCTTATGCTCTTTTAAAAAAACGACAAGAGGAGCA
AAAACAAGAATTACAGAAGCAAGAGGAGCAAAAACAAGAATTACAGAAGCAAGAGGAGCAAAAACAAGAATTACAGAAGC
AAGAGGAGCAAAAACAAGAATTACAGAAGCAAGAGGAGCAAAAACAAGGTTGGACTGCTAATGATGCTAGCAATGAAAAT
CTGCTTGGCCCCCCTAAAATCATTGATGAACCTAAACTTGGAGATTTTGATGATAATTTTACTTGGTCGGCAATGGTATT
AGCTGCTCAAGGAAAAAAAATAAATCAAATATCTATAGATGAAATTGATTGGTTAACTAAATTAAGAAAAGGATTAGAAG
AGACACGAAAAGGATTTGTTACTGAATTATTGGATAAATTGGGAGATGATCCTCTTACACCTGAGTCTCTTGATGATTTA
GAGACTCTGTTAATTAGAGCTGATGTCGGTATTGATTCAACTGATAAAGTTATCAGTTCTCTTAGAACAAAATTAAATGA
AGAAGTTGTGGGTGGAGAAGCAGGAATAAAATTCTTAAAGAAAGAATTAAAATTAATTGTTGATAAACCAATAAAAAACT
CAGGTACTGATCTTTTAATACCCCAAAAGGGTAAATTAAATGTTTGGTTATTAGTAGGAGTTAATGGGGTTGGTAAAACT
ACAACTTTAGGAAAATTGGCATATTTGTCATCAAGGAGTAATTATAAAACTTTGATAGCTGCTGCTGATACTTTTAGAGC
TGCGGCAGTAGAACAACTTAAAGTATGGGGTGAAAGGAGTAATGTTGATGTTATATCTAATCAATCAAAAAATGCTGATC
CAGCTGCTGTAGTTTTTGATGCAATTAATTCTGCACAAAAAAGAAATGTTGATCTATTACTAGTTGATACAGCAGGTAGA
TTGCAAACAAAAAATAATCTAATGGATGAATTAGCAAAAATAAAAAAAATTATCGATAAAAAGGTTCCAGATGCAATCAT
TGAATCATTATTAGTGTTAGATGCAAGTCAAGGTCAAAATGGCTTAAAGCAAGCAAAAAGTTTTGCAAAATCAGCAAATT
TAAGCGGAGCAATCATCACTAAATTAGATGGCACTTCACGAGGAGGCGTTTCTTTAGCTGTATCTGAAGAAGTTAATTTG
CCTATAAGATTTATTGGGGCTGGAGAAGGTATAAAGGATTTGAGACCTTTTAATAGTTACGAATTTGTAGAGGCTATGCT
TGCAGATAAATAA

Upstream 100 bases:

>100_bases
AATGGAATTTTAAGGAGATTACAAACAGTTAAATTCCAATGATTATTTGATATAAATAAATAGTATTTTAAAATTTACTA
AATACGGTCTATAAATATCA

Downstream 100 bases:

>100_bases
ATTTTTAAAAATTTTATTTAAAACTTTAAATTTAATGTTAAAACATATTTAACTATTAGATTTGTTTTGACAAATAATCA
AAAAGAAAAATTATTTTCAA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKNTDSDNSQEWAAQAYALLKKRQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQGWTANDASNEN
LLGPPKIIDEPKLGDFDDNFTWSAMVLAAQGKKINQISIDEIDWLTKLRKGLEETRKGFVTELLDKLGDDPLTPESLDDL
ETLLIRADVGIDSTDKVISSLRTKLNEEVVGGEAGIKFLKKELKLIVDKPIKNSGTDLLIPQKGKLNVWLLVGVNGVGKT
TTLGKLAYLSSRSNYKTLIAAADTFRAAAVEQLKVWGERSNVDVISNQSKNADPAAVVFDAINSAQKRNVDLLLVDTAGR
LQTKNNLMDELAKIKKIIDKKVPDAIIESLLVLDASQGQNGLKQAKSFAKSANLSGAIITKLDGTSRGGVSLAVSEEVNL
PIRFIGAGEGIKDLRPFNSYEFVEAMLADK

Sequences:

>Translated_430_residues
MKNTDSDNSQEWAAQAYALLKKRQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQGWTANDASNEN
LLGPPKIIDEPKLGDFDDNFTWSAMVLAAQGKKINQISIDEIDWLTKLRKGLEETRKGFVTELLDKLGDDPLTPESLDDL
ETLLIRADVGIDSTDKVISSLRTKLNEEVVGGEAGIKFLKKELKLIVDKPIKNSGTDLLIPQKGKLNVWLLVGVNGVGKT
TTLGKLAYLSSRSNYKTLIAAADTFRAAAVEQLKVWGERSNVDVISNQSKNADPAAVVFDAINSAQKRNVDLLLVDTAGR
LQTKNNLMDELAKIKKIIDKKVPDAIIESLLVLDASQGQNGLKQAKSFAKSANLSGAIITKLDGTSRGGVSLAVSEEVNL
PIRFIGAGEGIKDLRPFNSYEFVEAMLADK
>Mature_430_residues
MKNTDSDNSQEWAAQAYALLKKRQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQGWTANDASNEN
LLGPPKIIDEPKLGDFDDNFTWSAMVLAAQGKKINQISIDEIDWLTKLRKGLEETRKGFVTELLDKLGDDPLTPESLDDL
ETLLIRADVGIDSTDKVISSLRTKLNEEVVGGEAGIKFLKKELKLIVDKPIKNSGTDLLIPQKGKLNVWLLVGVNGVGKT
TTLGKLAYLSSRSNYKTLIAAADTFRAAAVEQLKVWGERSNVDVISNQSKNADPAAVVFDAINSAQKRNVDLLLVDTAGR
LQTKNNLMDELAKIKKIIDKKVPDAIIESLLVLDASQGQNGLKQAKSFAKSANLSGAIITKLDGTSRGGVSLAVSEEVNL
PIRFIGAGEGIKDLRPFNSYEFVEAMLADK

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=277, Percent_Identity=33.9350180505415, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI226371618, Length=228, Percent_Identity=36.4035087719298, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI23308697, Length=309, Percent_Identity=28.4789644012945, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI295424842, Length=309, Percent_Identity=28.4789644012945, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=33.8235294117647, Blast_Score=89, Evalue=7e-18,
Organism=Escherichia coli, GI1789874, Length=270, Percent_Identity=47.4074074074074, Blast_Score=238, Evalue=4e-64,
Organism=Escherichia coli, GI1788963, Length=270, Percent_Identity=31.4814814814815, Blast_Score=137, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17539958, Length=295, Percent_Identity=31.864406779661, Blast_Score=152, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI193206261, Length=322, Percent_Identity=30.7453416149068, Blast_Score=112, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=331, Percent_Identity=32.02416918429, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6320498, Length=216, Percent_Identity=35.6481481481481, Blast_Score=103, Evalue=7e-23,
Organism=Drosophila melanogaster, GI17647949, Length=277, Percent_Identity=33.5740072202166, Blast_Score=148, Evalue=9e-36,
Organism=Drosophila melanogaster, GI24641198, Length=229, Percent_Identity=31.0043668122271, Blast_Score=101, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 47640; Mature: 47640

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTDSDNSQEWAAQAYALLKKRQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQKQEEQKQGWTANDASNENLLGPPKIIDEPKLGDFDDNFTWSAMVLAAQGKKINQISID
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHH
EIDWLTKLRKGLEETRKGFVTELLDKLGDDPLTPESLDDLETLLIRADVGIDSTDKVISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
LRTKLNEEVVGGEAGIKFLKKELKLIVDKPIKNSGTDLLIPQKGKLNVWLLVGVNGVGKT
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCC
TTLGKLAYLSSRSNYKTLIAAADTFRAAAVEQLKVWGERSNVDVISNQSKNADPAAVVFD
HHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHH
AINSAQKRNVDLLLVDTAGRLQTKNNLMDELAKIKKIIDKKVPDAIIESLLVLDASQGQN
HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH
GLKQAKSFAKSANLSGAIITKLDGTSRGGVSLAVSEEVNLPIRFIGAGEGIKDLRPFNSY
HHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCHHHCCCCCHH
EFVEAMLADK
HHHHHHHCCC
>Mature Secondary Structure
MKNTDSDNSQEWAAQAYALLKKRQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQKQEEQKQGWTANDASNENLLGPPKIIDEPKLGDFDDNFTWSAMVLAAQGKKINQISID
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHH
EIDWLTKLRKGLEETRKGFVTELLDKLGDDPLTPESLDDLETLLIRADVGIDSTDKVISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
LRTKLNEEVVGGEAGIKFLKKELKLIVDKPIKNSGTDLLIPQKGKLNVWLLVGVNGVGKT
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCC
TTLGKLAYLSSRSNYKTLIAAADTFRAAAVEQLKVWGERSNVDVISNQSKNADPAAVVFD
HHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHH
AINSAQKRNVDLLLVDTAGRLQTKNNLMDELAKIKKIIDKKVPDAIIESLLVLDASQGQN
HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH
GLKQAKSFAKSANLSGAIITKLDGTSRGGVSLAVSEEVNLPIRFIGAGEGIKDLRPFNSY
HHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCHHHCCCCCHH
EFVEAMLADK
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]