Click here to switch to the map view.

The map label for this gene is ygaV [C]

Identifier: 78358760

GI number: 78358760

Start: 3681318

End: 3681650

Strand: Direct

Name: ygaV [C]

Synonym: Dde_3721

Alternate gene names: 78358760

Gene position: 3681318-3681650 (Clockwise)

Preceding gene: 78358754

Following gene: 78358761

Centisome position: 98.69

GC content: 55.56

Gene sequence:

>333_bases
ATGGATAATCCGTTCACTGAGCGTCAGGCCGCAATTTTTAAAGCGCTGGGACATCCGGCACGATTATGCATGGTCGATGC
GCTGACCGCCGGAGCACGCTGTGTGTGCGAACTGCAGGAACTGGTCGGCTCAGACATGTCCACTGTCTCCAAGCATCTTT
CCGTACTTAAAAAAACCGGTATCGTGCAGGATGAGCGTCGCGGCAACAATATTTACTATTCCATTGCCCTGCCTTGCGTG
ACCGGTTTTCTGCAATGCACCCGTCAGGCTGTGGAGCGCGCAGGCATCAGCCCCGCACCTGAACAAACCGGCAGAACGGA
TGCAGCCGACTGA

Upstream 100 bases:

>100_bases
CTCTGCCGAAGCATTTGGCTGAATCGCCAAATACTTCTTGACACGCCCCTTCGCCGGAAGTATTTGGCGAAAAAGCCAAA
TGAAAAAGGAGGGCACAGTG

Downstream 100 bases:

>100_bases
CAAATCCGCCTTGAACGGCAAGCATGTTGAAACCCCTAAAAAGGAACACCGCGATGTCTGCACACGACCCTTTTACAGCT
CCTCCCTGCTGCTGCAATAA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: ArsR Family Transcriptional Regulator; Regulatory Protein ArsR; Transcriptional Regulator; Regulatory Protein Arsr; Transcriptional Regulator ArsR Family Protein; ArsR-Family Transcription Regulator; Transcriptional Regulators

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MDNPFTERQAAIFKALGHPARLCMVDALTAGARCVCELQELVGSDMSTVSKHLSVLKKTGIVQDERRGNNIYYSIALPCV
TGFLQCTRQAVERAGISPAPEQTGRTDAAD

Sequences:

>Translated_110_residues
MDNPFTERQAAIFKALGHPARLCMVDALTAGARCVCELQELVGSDMSTVSKHLSVLKKTGIVQDERRGNNIYYSIALPCV
TGFLQCTRQAVERAGISPAPEQTGRTDAAD
>Mature_110_residues
MDNPFTERQAAIFKALGHPARLCMVDALTAGARCVCELQELVGSDMSTVSKHLSVLKKTGIVQDERRGNNIYYSIALPCV
TGFLQCTRQAVERAGISPAPEQTGRTDAAD

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11883; Mature: 11883

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNPFTERQAAIFKALGHPARLCMVDALTAGARCVCELQELVGSDMSTVSKHLSVLKKTG
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
IVQDERRGNNIYYSIALPCVTGFLQCTRQAVERAGISPAPEQTGRTDAAD
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDNPFTERQAAIFKALGHPARLCMVDALTAGARCVCELQELVGSDMSTVSKHLSVLKKTG
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
IVQDERRGNNIYYSIALPCVTGFLQCTRQAVERAGISPAPEQTGRTDAAD
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA