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The map label for this gene is 78358748

Identifier: 78358748

GI number: 78358748

Start: 3670338

End: 3671657

Strand: Direct

Name: 78358748

Synonym: Dde_3709

Alternate gene names: NA

Gene position: 3670338-3671657 (Clockwise)

Preceding gene: 78358747

Following gene: 78358749

Centisome position: 98.39

GC content: 57.12

Gene sequence:

>1320_bases
ATGGGCATTGCCGACCGGAAAATTGAGGACGAAGGGCTGAAGCGCGGCATAGCGGCGCTTACCCCGGACCGCATTCAGAG
CGTCATCCAAAGCGTCATTCAGGGCGAAACCGGCGCACGGCTTAAAGTGTATGCCGAAACATGCATGCGTTGCGGCATGT
GCGCTCCCGCCTGTCATTACTACCTTTCGCACGACGGCGACCCCAGTTATTCGCCCGTGGGCAAGGTGGAACAGACCATG
TGGAAAATCCTGCGCTCGGAAGGCAGGCTCACCCCTGACGATATCTATCTGATGGCGCAGCTGGCCTACACCGAATGCAA
CCTGTGCCGCCGCTGCACCCACTACTGTCCGGTTGGCATAGACACCGGATACATAATGAGCACCGTGCGCCGCATCTGCC
ACAGACTGGGTGTCACGCCGCTGTACATTCAGGATACCGCACACAGCCATTCCGGCACCATGAACCAGATGTGGGTCAAA
GAAGACGAATGGATAGACAGCCTGCAGTGGCAGGAAGAAGAAGCCCGCGATGAAATACCCACAGTCCGCTTTCCCATAGA
AAAAGAAGGGGCGGACATCATGTATTCGGTCATCGCACCGGAGCCTAAATTCCGCACACAGCTCATCTATCAGGCCGGTG
TCATTTTTGATCAGGCCGGGGTAAACTGGACGCTGCCCCAGACTCCCGGCTGGGACAACAGCGACATGGCCATGTTTTCA
GGTGATTATGAAATAATGGGCAGGGTCAAACGGGCCCACTTTGAAACAGCACAGCGCCTTAAGGTAAAACGTATTGTCAT
GGGCGAATGCGGCCATGCCTTCAGGTCCATTTACGATGTGGGCAACCGCTGGCTGGGCTGGAAATGGCACCCCGTACCCG
TGGTTCATTCCGTGGAGTTTTTCTGGGAGCTGTTCACTCAGGGCAAAATCAAGCTGGCCAAACAGTTTGAAGAGCCTGTG
ACCATCCACGATCCGTGCAACATCATCCGCGGCCGCGGCCTGACGGAAAAACTGCGCGAGGTGGTCAGCTTCCTGTGTCC
CAACGTGGTGGAAATGACCCCCAACCGCGAGCACAACCTGTGCTGCTGTGCGGGCGGCGGAGTCATCAACTGCGGTCCCC
CGTTCAAAAACGTACGTGTGGAAGGCAACCGCGCCAAGGCGGAGCAGCTCAAACGCACTGAAGTGGGCGTCATCATAGCC
CCCTGCCACAACTGCCACGGCGGGCTGGAAGACATTGTCCATCACTACGAGCTGGGCATGTCGCTCAAATTTCTGGGCGA
CCTCATCTACGAATGCATGGAAAAGCCCGGCGCCGAATAG

Upstream 100 bases:

>100_bases
GCCATGCGCTGTTCATTCCCTTTACTCGCGCATACATGGGCTCGGAATTTGGCGGCGTACGCCAGTGCCGCGACTGGTAA
ATCCCTGAGGAGGCTGCAAA

Downstream 100 bases:

>100_bases
GCGCGGTGCAGGGAGGTCATATGCTGCGACGCACGTTCTTTGTCCTCGCCGTGCTGACCGCCGCCGTTTCATACGCGCTG
GCGGCCATGCCCGACGGCAT

Product: ferredoxin, 4Fe-4S

Products: NA

Alternate protein names: HMC operon ORF 6 [H]

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MGIADRKIEDEGLKRGIAALTPDRIQSVIQSVIQGETGARLKVYAETCMRCGMCAPACHYYLSHDGDPSYSPVGKVEQTM
WKILRSEGRLTPDDIYLMAQLAYTECNLCRRCTHYCPVGIDTGYIMSTVRRICHRLGVTPLYIQDTAHSHSGTMNQMWVK
EDEWIDSLQWQEEEARDEIPTVRFPIEKEGADIMYSVIAPEPKFRTQLIYQAGVIFDQAGVNWTLPQTPGWDNSDMAMFS
GDYEIMGRVKRAHFETAQRLKVKRIVMGECGHAFRSIYDVGNRWLGWKWHPVPVVHSVEFFWELFTQGKIKLAKQFEEPV
TIHDPCNIIRGRGLTEKLREVVSFLCPNVVEMTPNREHNLCCCAGGGVINCGPPFKNVRVEGNRAKAEQLKRTEVGVIIA
PCHNCHGGLEDIVHHYELGMSLKFLGDLIYECMEKPGAE

Sequences:

>Translated_439_residues
MGIADRKIEDEGLKRGIAALTPDRIQSVIQSVIQGETGARLKVYAETCMRCGMCAPACHYYLSHDGDPSYSPVGKVEQTM
WKILRSEGRLTPDDIYLMAQLAYTECNLCRRCTHYCPVGIDTGYIMSTVRRICHRLGVTPLYIQDTAHSHSGTMNQMWVK
EDEWIDSLQWQEEEARDEIPTVRFPIEKEGADIMYSVIAPEPKFRTQLIYQAGVIFDQAGVNWTLPQTPGWDNSDMAMFS
GDYEIMGRVKRAHFETAQRLKVKRIVMGECGHAFRSIYDVGNRWLGWKWHPVPVVHSVEFFWELFTQGKIKLAKQFEEPV
TIHDPCNIIRGRGLTEKLREVVSFLCPNVVEMTPNREHNLCCCAGGGVINCGPPFKNVRVEGNRAKAEQLKRTEVGVIIA
PCHNCHGGLEDIVHHYELGMSLKFLGDLIYECMEKPGAE
>Mature_438_residues
GIADRKIEDEGLKRGIAALTPDRIQSVIQSVIQGETGARLKVYAETCMRCGMCAPACHYYLSHDGDPSYSPVGKVEQTMW
KILRSEGRLTPDDIYLMAQLAYTECNLCRRCTHYCPVGIDTGYIMSTVRRICHRLGVTPLYIQDTAHSHSGTMNQMWVKE
DEWIDSLQWQEEEARDEIPTVRFPIEKEGADIMYSVIAPEPKFRTQLIYQAGVIFDQAGVNWTLPQTPGWDNSDMAMFSG
DYEIMGRVKRAHFETAQRLKVKRIVMGECGHAFRSIYDVGNRWLGWKWHPVPVVHSVEFFWELFTQGKIKLAKQFEEPVT
IHDPCNIIRGRGLTEKLREVVSFLCPNVVEMTPNREHNLCCCAGGGVINCGPPFKNVRVEGNRAKAEQLKRTEVGVIIAP
CHNCHGGLEDIVHHYELGMSLKFLGDLIYECMEKPGAE

Specific function: HMWC (high-molecular-weight cytochrome c precursor), ORF2, ORF3, ORF4, ORF5, ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfa

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 49832; Mature: 49701

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIADRKIEDEGLKRGIAALTPDRIQSVIQSVIQGETGARLKVYAETCMRCGMCAPACHY
CCCCCCCCCHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCHHHHHH
YLSHDGDPSYSPVGKVEQTMWKILRSEGRLTPDDIYLMAQLAYTECNLCRRCTHYCPVGI
HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DTGYIMSTVRRICHRLGVTPLYIQDTAHSHSGTMNQMWVKEDEWIDSLQWQEEEARDEIP
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCCHHHHHHHCCCHHHHHHCCC
TVRFPIEKEGADIMYSVIAPEPKFRTQLIYQAGVIFDQAGVNWTLPQTPGWDNSDMAMFS
EEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEECCCCEEECCCCCCCCCCCCEEEC
GDYEIMGRVKRAHFETAQRLKVKRIVMGECGHAFRSIYDVGNRWLGWKWHPVPVVHSVEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHH
FWELFTQGKIKLAKQFEEPVTIHDPCNIIRGRGLTEKLREVVSFLCPNVVEMTPNREHNL
HHHHHHCCHHHHHHHHCCCEEECCCHHHHHCCCHHHHHHHHHHHHCCCCEECCCCCCCCE
CCCAGGGVINCGPPFKNVRVEGNRAKAEQLKRTEVGVIIAPCHNCHGGLEDIVHHYELGM
EEEECCCEEECCCCCCCEEECCCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHCC
SLKFLGDLIYECMEKPGAE
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GIADRKIEDEGLKRGIAALTPDRIQSVIQSVIQGETGARLKVYAETCMRCGMCAPACHY
CCCCCCCCHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCHHHHHH
YLSHDGDPSYSPVGKVEQTMWKILRSEGRLTPDDIYLMAQLAYTECNLCRRCTHYCPVGI
HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DTGYIMSTVRRICHRLGVTPLYIQDTAHSHSGTMNQMWVKEDEWIDSLQWQEEEARDEIP
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCCHHHHHHHCCCHHHHHHCCC
TVRFPIEKEGADIMYSVIAPEPKFRTQLIYQAGVIFDQAGVNWTLPQTPGWDNSDMAMFS
EEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEECCCCEEECCCCCCCCCCCCEEEC
GDYEIMGRVKRAHFETAQRLKVKRIVMGECGHAFRSIYDVGNRWLGWKWHPVPVVHSVEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHH
FWELFTQGKIKLAKQFEEPVTIHDPCNIIRGRGLTEKLREVVSFLCPNVVEMTPNREHNL
HHHHHHCCHHHHHHHHCCCEEECCCHHHHHCCCHHHHHHHHHHHHCCCCEECCCCCCCCE
CCCAGGGVINCGPPFKNVRVEGNRAKAEQLKRTEVGVIIAPCHNCHGGLEDIVHHYELGM
EEEECCCEEECCCCCCCEEECCCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHCC
SLKFLGDLIYECMEKPGAE
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]