Click here to switch to the map view.

The map label for this gene is 78358747

Identifier: 78358747

GI number: 78358747

Start: 3669658

End: 3670317

Strand: Direct

Name: 78358747

Synonym: Dde_3708

Alternate gene names: NA

Gene position: 3669658-3670317 (Clockwise)

Preceding gene: 78358746

Following gene: 78358748

Centisome position: 98.38

GC content: 58.79

Gene sequence:

>660_bases
GTGACGGCTTTCTACAACTTTGTTTCGGGGCCGCTTGCATGGGCGGCATGGGCCGTATTCATTGCGGGCAGCGCCTACCG
TATTTTTTCCATGGTGCGTCTGGCGCAAAAAAAAGACGGTTCCGCCGTGGCGTACATGAGCTGGAAATACAGCCTGCGCT
CCATCATGCACTGGATAATCCCCTTCGGCAGCATCGGCTGGCGCGAAAACCCCGCGGTCACGGTGCTCACATTCCTCTTT
CACATCTGCTTTTTCGCCGTGGCCATCTTCCTTTCATCGCACGTGGTGCTGTGGGACTACGCCTTCGGCATTGATTTCTG
GAGCCTGCCCGACCCCGTGGCGGATATCATGACCCTTGCGGTGCTGGGCATATGCCTGTTTTTTGCCTACCGCAGGCTGT
TCAATGCCAATGTGCGCTTTGTCACCCGCCCTGCAGACTGGGTGGCGCTGGGCATCGTGGCGTTGCCGTTTCTCACCGGA
TTCATGGCCACGCATCTGGTGGGCGACAACCTGATACTGAGCACCCTGCATGTGCTCTCTGGCGAGGCGGTGCTGGTGGC
CATCCCGTTCACACGGCTCAGCCATGCGCTGTTCATTCCCTTTACTCGCGCATACATGGGCTCGGAATTTGGCGGCGTAC
GCCAGTGCCGCGACTGGTAA

Upstream 100 bases:

>100_bases
CCGTTTTCAGTCCTGACGGCCGCAAACTGCTGCTGCGGGGTGTGCGCAACGGCAAGGCTGTGCGCATCGTAAAGCAACTC
CAATAGCAAGGGAGGCAGTC

Downstream 100 bases:

>100_bases
ATCCCTGAGGAGGCTGCAAAATGGGCATTGCCGACCGGAAAATTGAGGACGAAGGGCTGAAGCGCGGCATAGCGGCGCTT
ACCCCGGACCGCATTCAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: HMC operon ORF 5 [H]

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTAFYNFVSGPLAWAAWAVFIAGSAYRIFSMVRLAQKKDGSAVAYMSWKYSLRSIMHWIIPFGSIGWRENPAVTVLTFLF
HICFFAVAIFLSSHVVLWDYAFGIDFWSLPDPVADIMTLAVLGICLFFAYRRLFNANVRFVTRPADWVALGIVALPFLTG
FMATHLVGDNLILSTLHVLSGEAVLVAIPFTRLSHALFIPFTRAYMGSEFGGVRQCRDW

Sequences:

>Translated_219_residues
MTAFYNFVSGPLAWAAWAVFIAGSAYRIFSMVRLAQKKDGSAVAYMSWKYSLRSIMHWIIPFGSIGWRENPAVTVLTFLF
HICFFAVAIFLSSHVVLWDYAFGIDFWSLPDPVADIMTLAVLGICLFFAYRRLFNANVRFVTRPADWVALGIVALPFLTG
FMATHLVGDNLILSTLHVLSGEAVLVAIPFTRLSHALFIPFTRAYMGSEFGGVRQCRDW
>Mature_218_residues
TAFYNFVSGPLAWAAWAVFIAGSAYRIFSMVRLAQKKDGSAVAYMSWKYSLRSIMHWIIPFGSIGWRENPAVTVLTFLFH
ICFFAVAIFLSSHVVLWDYAFGIDFWSLPDPVADIMTLAVLGICLFFAYRRLFNANVRFVTRPADWVALGIVALPFLTGF
MATHLVGDNLILSTLHVLSGEAVLVAIPFTRLSHALFIPFTRAYMGSEFGGVRQCRDW

Specific function: HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24639; Mature: 24508

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFYNFVSGPLAWAAWAVFIAGSAYRIFSMVRLAQKKDGSAVAYMSWKYSLRSIMHWII
CCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH
PFGSIGWRENPAVTVLTFLFHICFFAVAIFLSSHVVLWDYAFGIDFWSLPDPVADIMTLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHCCCCCCCCCHHHHHHHHH
VLGICLFFAYRRLFNANVRFVTRPADWVALGIVALPFLTGFMATHLVGDNLILSTLHVLS
HHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
GEAVLVAIPFTRLSHALFIPFTRAYMGSEFGGVRQCRDW
CCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure 
TAFYNFVSGPLAWAAWAVFIAGSAYRIFSMVRLAQKKDGSAVAYMSWKYSLRSIMHWII
CCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH
PFGSIGWRENPAVTVLTFLFHICFFAVAIFLSSHVVLWDYAFGIDFWSLPDPVADIMTLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHCCCCCCCCCHHHHHHHHH
VLGICLFFAYRRLFNANVRFVTRPADWVALGIVALPFLTGFMATHLVGDNLILSTLHVLS
HHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
GEAVLVAIPFTRLSHALFIPFTRAYMGSEFGGVRQCRDW
CCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]