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The map label for this gene is dcrA [H]

Identifier: 78358335

GI number: 78358335

Start: 3283200

End: 3285362

Strand: Reverse

Name: dcrA [H]

Synonym: Dde_3295

Alternate gene names: 78358335

Gene position: 3285362-3283200 (Counterclockwise)

Preceding gene: 78358337

Following gene: 78358333

Centisome position: 88.07

GC content: 58.21

Gene sequence:

>2163_bases
ATGCTTAAGAATCTTGGACTGACATGGAAGATCATGATCATACTGGTCGTGGTCGTTCCGGCAATGCTCGGTCTGACACT
GTACATGACAGGGTCTTTTACCGAGCATATGGAGCGGACAGCCCGTGAACAGAGCCTGGAAACGGCTTACAGGTATGCGG
GAAAAATTGATGCCGACATGAGTCTGGCCATGCATTCGGCCAGAGCGTTTGCCCGGCTTGCGGAAAGTATGATGGGGCAC
GAAGGGCGCCCCACGCGTGAAGCGCTGCGTGACAGCATGGAAAACTTTCTGCGCGACCATACCAACCTGCTGGGTATGTT
CGCAGCGTTCGAGCCGGATGTTTTTGACGGCATGGACAGCATGTACCGCGGGGCCACATATCATAACAAGGACGGCCGGT
TCGTGCCGTGGGTTCACTATGAGGGCGGCGTCATAAAGACCATTCCCAGCGTGGGGTATGATGTGGATGACGCAGACGGT
GCATGGTATCATCTGCCGCGCAAAACCGGCAAAGAAATCATAATGGAGCCGTGGGCCTACGAAATAGGCGGCGAGTTTGT
CATGATGGTGGACATGCTGGTACCCCTGCGCAGGAACGGGCGGTTTGCCGGTGTGGTCGGTATTGACTATCCGATGGGCA
CCATCGATGAATTCGTGAAAGACATTAAAATGTTCGATACCGGTTATGCTTTTCTGCTTTCCGCAACGGGCACGTACGTG
GCGCACCCGCAGAACCAGCTGGTGACTGACAAGGCGAATATATTCAGCCAGCCGCAGACAGAAGCCGAGCTGCGCGCCGG
TCTCAAGCGGGTGCAGCAGGGCGAGGATTTTTCCATCACCGTTGAGCGTGACGGTAAACGTCACCTGCTTACTTTTGTAC
CCATTTTCATAGGCCGGGCCGACACGCCGTTTATTCTGGGTCTTGACGTACCCGTGGCCGAGGTGCTGGCCGCAGCGTAC
GGCATGCGTAATAACGCGCTGATGATCGGCGGTGTGACGGCAGTCTTCATTCTGTTGATCATTCTGTATATATCGCGGGT
TATCAGCAGACCCATTCAGGAAACCGTGCGTGCGGTGGAGGGGATAGCCTCAGGCAACCTCGGTACGCGGCTGCCTGCGG
ATTCGAAAGATGAAGTGGGACGCATGCAGGCTTCGGTTAATCATATGGCCGAAGAACTGGCGCGCAACATGGGTGAAATC
AAGACGCAGCAGGCAGCTGCCGAAGAAAAGACGCGTGTGGCGGAACAGGCCATGCAGGATGCGCAGGAGGCCCGCAGGCA
GGCGGAGGAAGCACGTCGGGAAGGCATGCTGATGGCCGCCGGCCGTCTGGAGCAGATCGTGGCGCATCTTTCCAGTGCTT
CGGAAGAAATCTCGGCTCAGTCCAATGAAATACGGCATGGTTCCGAGATTCAGCGGGACCGCATAGCCTCTACGGCCACG
GCCATGGAGGAAATGAATGCCACGGTGCTTGAGGTGGCCAGAAACGCCGGTGAAACAGCGGACCAGACCAATGCCTCGCG
CGCCAGCGCACTGGAAGGGGCGCAGGTGGTCACAGAATCTGTGGCAGCCATGAACAGCATCAAGACCAACGCCGATGCCC
TGAAGGAAAACATGGCGGCACTGGGCACGCAGGCCCAGTCCATCGGGGCCATTATGACGGTCATCGAGGATATAGCCGAC
CAGACCAACCTGCTGGCGCTGAACGCGGCCATCGAAGCCGCCCGTGCCGGTGACGCCGGACGGGGTTTCGCCGTGGTGGC
CGACGAAGTGCGCAAGCTGGCGGAGAAAACCATGGGCGCCACCAAGGAGGTCGGCCAGTCCATCAAGGCTATTCAGCAGG
CCGCGCGGCAGAATATGGAAGCCATGGAAGCCACGGTGGAACGCATCGGTCATGCCACCACGCTGTCACAGCGTTCAGGT
GAGGTGCTGCATGCCATCGTCGCCGCAGTGGAACAGTCGGCCGACAGGGTGCAGAGCATTGCCACGGCAGCCGAACAGCA
GTCGGCAACGTCCGAGGAGATAAACAGCGCGGTCGAGGAAATAAACCAGATAACACTGGACACCGCGCAGGCTGTGAACG
AAGCGGCCATTGCCGCTGAAGAGCTGGCCCGTCAGGCACAGGAGCTCAGTGCCATCATCGACGACATGAAAAATCAGGGA
TAA

Upstream 100 bases:

>100_bases
TCAGGTTTTCTGCCGACAGTCTGCAACTGGCGCGGTGCATGGTTGCAGATGGCACATTATGGCGGTTTCCGGCCGCCGTT
TTACAGACGGGGGAGCAATA

Downstream 100 bases:

>100_bases
GCCGCAGGCTGCGGTGTGATGCCGCATGGCTGTTTTGTGCAGTCCGGAACTTTGTATCCGGCGCCGCGCACGCCATGCGG
CATCGGTCCTTCGGAGAAAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 720; Mature: 720

Protein sequence:

>720_residues
MLKNLGLTWKIMIILVVVVPAMLGLTLYMTGSFTEHMERTAREQSLETAYRYAGKIDADMSLAMHSARAFARLAESMMGH
EGRPTREALRDSMENFLRDHTNLLGMFAAFEPDVFDGMDSMYRGATYHNKDGRFVPWVHYEGGVIKTIPSVGYDVDDADG
AWYHLPRKTGKEIIMEPWAYEIGGEFVMMVDMLVPLRRNGRFAGVVGIDYPMGTIDEFVKDIKMFDTGYAFLLSATGTYV
AHPQNQLVTDKANIFSQPQTEAELRAGLKRVQQGEDFSITVERDGKRHLLTFVPIFIGRADTPFILGLDVPVAEVLAAAY
GMRNNALMIGGVTAVFILLIILYISRVISRPIQETVRAVEGIASGNLGTRLPADSKDEVGRMQASVNHMAEELARNMGEI
KTQQAAAEEKTRVAEQAMQDAQEARRQAEEARREGMLMAAGRLEQIVAHLSSASEEISAQSNEIRHGSEIQRDRIASTAT
AMEEMNATVLEVARNAGETADQTNASRASALEGAQVVTESVAAMNSIKTNADALKENMAALGTQAQSIGAIMTVIEDIAD
QTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGATKEVGQSIKAIQQAARQNMEAMEATVERIGHATTLSQRSG
EVLHAIVAAVEQSADRVQSIATAAEQQSATSEEINSAVEEINQITLDTAQAVNEAAIAAEELARQAQELSAIIDDMKNQG

Sequences:

>Translated_720_residues
MLKNLGLTWKIMIILVVVVPAMLGLTLYMTGSFTEHMERTAREQSLETAYRYAGKIDADMSLAMHSARAFARLAESMMGH
EGRPTREALRDSMENFLRDHTNLLGMFAAFEPDVFDGMDSMYRGATYHNKDGRFVPWVHYEGGVIKTIPSVGYDVDDADG
AWYHLPRKTGKEIIMEPWAYEIGGEFVMMVDMLVPLRRNGRFAGVVGIDYPMGTIDEFVKDIKMFDTGYAFLLSATGTYV
AHPQNQLVTDKANIFSQPQTEAELRAGLKRVQQGEDFSITVERDGKRHLLTFVPIFIGRADTPFILGLDVPVAEVLAAAY
GMRNNALMIGGVTAVFILLIILYISRVISRPIQETVRAVEGIASGNLGTRLPADSKDEVGRMQASVNHMAEELARNMGEI
KTQQAAAEEKTRVAEQAMQDAQEARRQAEEARREGMLMAAGRLEQIVAHLSSASEEISAQSNEIRHGSEIQRDRIASTAT
AMEEMNATVLEVARNAGETADQTNASRASALEGAQVVTESVAAMNSIKTNADALKENMAALGTQAQSIGAIMTVIEDIAD
QTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGATKEVGQSIKAIQQAARQNMEAMEATVERIGHATTLSQRSG
EVLHAIVAAVEQSADRVQSIATAAEQQSATSEEINSAVEEINQITLDTAQAVNEAAIAAEELARQAQELSAIIDDMKNQG
>Mature_720_residues
MLKNLGLTWKIMIILVVVVPAMLGLTLYMTGSFTEHMERTAREQSLETAYRYAGKIDADMSLAMHSARAFARLAESMMGH
EGRPTREALRDSMENFLRDHTNLLGMFAAFEPDVFDGMDSMYRGATYHNKDGRFVPWVHYEGGVIKTIPSVGYDVDDADG
AWYHLPRKTGKEIIMEPWAYEIGGEFVMMVDMLVPLRRNGRFAGVVGIDYPMGTIDEFVKDIKMFDTGYAFLLSATGTYV
AHPQNQLVTDKANIFSQPQTEAELRAGLKRVQQGEDFSITVERDGKRHLLTFVPIFIGRADTPFILGLDVPVAEVLAAAY
GMRNNALMIGGVTAVFILLIILYISRVISRPIQETVRAVEGIASGNLGTRLPADSKDEVGRMQASVNHMAEELARNMGEI
KTQQAAAEEKTRVAEQAMQDAQEARRQAEEARREGMLMAAGRLEQIVAHLSSASEEISAQSNEIRHGSEIQRDRIASTAT
AMEEMNATVLEVARNAGETADQTNASRASALEGAQVVTESVAAMNSIKTNADALKENMAALGTQAQSIGAIMTVIEDIAD
QTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGATKEVGQSIKAIQQAARQNMEAMEATVERIGHATTLSQRSG
EVLHAIVAAVEQSADRVQSIATAAEQQSATSEEINSAVEEINQITLDTAQAVNEAAIAAEELARQAQELSAIIDDMKNQG

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=390, Percent_Identity=30.2564102564103, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI1788194, Length=381, Percent_Identity=30.7086614173228, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI2367378, Length=361, Percent_Identity=28.2548476454294, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1788195, Length=349, Percent_Identity=30.6590257879656, Blast_Score=125, Evalue=8e-30,
Organism=Escherichia coli, GI1789453, Length=315, Percent_Identity=28.8888888888889, Blast_Score=99, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 78321; Mature: 78321

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNLGLTWKIMIILVVVVPAMLGLTLYMTGSFTEHMERTAREQSLETAYRYAGKIDADM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SLAMHSARAFARLAESMMGHEGRPTREALRDSMENFLRDHTNLLGMFAAFEPDVFDGMDS
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHH
MYRGATYHNKDGRFVPWVHYEGGVIKTIPSVGYDVDDADGAWYHLPRKTGKEIIMEPWAY
HHCCCCEECCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCEEECCHHHCHHHHHCCCHH
EIGGEFVMMVDMLVPLRRNGRFAGVVGIDYPMGTIDEFVKDIKMFDTGYAFLLSATGTYV
HHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCEE
AHPQNQLVTDKANIFSQPQTEAELRAGLKRVQQGEDFSITVERDGKRHLLTFVPIFIGRA
ECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCC
DTPFILGLDVPVAEVLAAAYGMRNNALMIGGVTAVFILLIILYISRVISRPIQETVRAVE
CCCEEEECCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIASGNLGTRLPADSKDEVGRMQASVNHMAEELARNMGEIKTQQAAAEEKTRVAEQAMQD
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQEARRQAEEARREGMLMAAGRLEQIVAHLSSASEEISAQSNEIRHGSEIQRDRIASTAT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AMEEMNATVLEVARNAGETADQTNASRASALEGAQVVTESVAAMNSIKTNADALKENMAA
HHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LGTQAQSIGAIMTVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGA
HCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
TKEVGQSIKAIQQAARQNMEAMEATVERIGHATTLSQRSGEVLHAIVAAVEQSADRVQSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAAEQQSATSEEINSAVEEINQITLDTAQAVNEAAIAAEELARQAQELSAIIDDMKNQG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKNLGLTWKIMIILVVVVPAMLGLTLYMTGSFTEHMERTAREQSLETAYRYAGKIDADM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SLAMHSARAFARLAESMMGHEGRPTREALRDSMENFLRDHTNLLGMFAAFEPDVFDGMDS
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHH
MYRGATYHNKDGRFVPWVHYEGGVIKTIPSVGYDVDDADGAWYHLPRKTGKEIIMEPWAY
HHCCCCEECCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCEEECCHHHCHHHHHCCCHH
EIGGEFVMMVDMLVPLRRNGRFAGVVGIDYPMGTIDEFVKDIKMFDTGYAFLLSATGTYV
HHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCEE
AHPQNQLVTDKANIFSQPQTEAELRAGLKRVQQGEDFSITVERDGKRHLLTFVPIFIGRA
ECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCC
DTPFILGLDVPVAEVLAAAYGMRNNALMIGGVTAVFILLIILYISRVISRPIQETVRAVE
CCCEEEECCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIASGNLGTRLPADSKDEVGRMQASVNHMAEELARNMGEIKTQQAAAEEKTRVAEQAMQD
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQEARRQAEEARREGMLMAAGRLEQIVAHLSSASEEISAQSNEIRHGSEIQRDRIASTAT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AMEEMNATVLEVARNAGETADQTNASRASALEGAQVVTESVAAMNSIKTNADALKENMAA
HHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LGTQAQSIGAIMTVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGA
HCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
TKEVGQSIKAIQQAARQNMEAMEATVERIGHATTLSQRSGEVLHAIVAAVEQSADRVQSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAAEQQSATSEEINSAVEEINQITLDTAQAVNEAAIAAEELARQAQELSAIIDDMKNQG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]