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The map label for this gene is dcrA [H]

Identifier: 78358333

GI number: 78358333

Start: 3280151

End: 3282313

Strand: Reverse

Name: dcrA [H]

Synonym: Dde_3293

Alternate gene names: 78358333

Gene position: 3282313-3280151 (Counterclockwise)

Preceding gene: 78358335

Following gene: 78358332

Centisome position: 87.99

GC content: 56.91

Gene sequence:

>2163_bases
ATGCTGAAGCATCTTGGCTTGAAATGGAAAATAATGGTTATTCTGGTGGTGGTAGTTCCGGTGATGCTGGGGCTGACATG
GTATCTGACCGGAACATTTATGAAGCTGATGGAACGGACAGCCGGTGAGCAGAGTTTTGAGCTTGCTTACCGTTATGCCA
ATAAAATAGATGCAGACATGAGCCTTGCCATGCATTCGGCACGGTCCGTGGCGCGGCTGACAGAGACCATGATGGGGCAT
GAGGGGCGTTTTACCCGCGAAGCCCTGCGTGACGGTATGGAAAATTTTCTGCGGGATCATCCAAATCTGCTGGGCATCTA
CGCCGCCTTTGAACCCGACGCGCTGGATGGTGCCGACTCCCGTTACATGAACAGTCCGTATCATAACGGCGACGGGCGCT
TTGTGCCCTGGGTGCACTATCAGGGCGGAGCCATCGTCACGGAGGCGAGCTCCGGATACGAAAATGATGATCCTGACGGT
GCCTGGTACCATCTGCCGCGCAAAAAAGGCACTGAAGTGATTATGGAGCCGTGGGCGTATGATCTGGGCGGCGAAAAAGT
ACTGATGGTGGATATGTTGGTGCCGCTCAGAAAAAACGGGCGCTTTGCCGGGGTTATCGGTGTTGATTTTCCCATGGGCA
CCATTGACCGTTTTGTGCGCGAAATAACCGTGTTCGGCTCCGGGTATGGTTTTCTTATTTCCGCCGCGGGCACATATGTG
GCGCATCCTCAGACGGACCTTGTTGAAAACAAAGTAAATATTTTTGAGCAAAAAGATGTATCGCCTGAACTCAGGGCCGG
GCTGCGCAAGGTTCTGGAGGGCGGCGATTTTTCTCTGAAGACGGAGGAGGACGGGGCGCCGTTTCTGCTTACCTTTGTGC
CGGTGTTCATAGGCAGGGCCGAAACGCCGTATATCTTCGGCATTAAAGTCCCGCTCAATGAAGTGTTGGCGGGGGCTTTC
TCCATGCGCAACTATGCCCTGCTGGCCGGTTGCGGCGCCACCATACTTATTCTGCTGCTCATCCTGTATGTCGCGCGTGT
CATTTCGTTGCCCATCAAGGCAACGGTGCATGCCGTGGAACAGATATCTTCGGGAGACTTTTCTGTCCGGCTGCCTGCGG
ATTCGAGAGATGAAGTGGGCAGAATGCAGGTGGCCGTCAATGACATGGCTGCCGAGCTTGCGCGGAACATGGATGAAATA
CGCCGGCAGCAGGCCGCCGCGGAAGAAAAGACCAAACAGGCTGAAGAAGCGACGCAGCAGGCGCATGAAGCCCGCAGGCA
GGCGGAGCAGGCCCGCCGGGAAGGCACACTGCAGGCCGCGCGTCAGCTTGAGGAGATTGTCGCGCATCTGTCTGTGGCGT
CAGAGGAAATATCTGTTCAGTCGCGCGAAATCAGACAGGGGTCTGAGGTGCAGCGCGAGCGCATAGCCTCGACAGCCACT
GCCATGGAAGAAATGAACGCCACAGTGCTTGAGGTGGCAAGGAACGCGGGCGAAACCGCTGATCAGGCCAAAACTTCGCG
CGATAATGCAATGGAAGGAGCCGGAGTGGTCAACCAGACCATGGAGGCCATGCAGGCCATCAAGCGCAATGCGGACGGAT
TGAGCATGAATATGAACCGGCTGGGCGAACAGGCGCAGTCCATCGGTACCATTATGAACGTTATCGAAGATATAGCAGAC
CAGACAAACCTGCTGGCGCTGAACGCCGCCATAGAAGCCGCCCGCGCGGGCGATGCCGGACGCGGGTTTGCCGTGGTGGC
GGACGAGGTGCGCAAGCTGGCGGAAAAAACCATGGGGGCCACCAAGGAAGTGGGTGACTCCATACGGGCCATCCAGCAGG
CTGCCAGCCAGAACGTGCATGCCATGGAATCAACCGTGGAACATATAGATGCGGCCACCAGACTGTCTTCGCGTTCGGGT
GAGGTGCTGGCGGCCATCGTAAGCGGTGTTGAACAGTCTGCGGACAGGGTGCAGAGCATCGCAACCGCCGCGGAACAGCA
GTCCGCCACATCGGAGGAGATAAACCGCGCAGTTGAGGAGATTAACCAGATTACGCTGGAAACAGCGCGCGCGGTGGGAG
AAGCCACGGTTGCCGCCGAAGAGCTGGCCCGTCAGGCGCAGCAGCTCAGCATGATTGTGGAAGAAATGAAAAGTCAGGAA
TAG

Upstream 100 bases:

>100_bases
CGCGGGTATGGCCGGCAGCTGCCGATGCAGACTGTGTGCGGTACCGGACAGAAGGTTGGGACCATTGGGCAGAAAGCGGT
TTTACAGCGGAGATAACGGT

Downstream 100 bases:

>100_bases
ACACGTGCGGTGCGGGGCCCGTATCCGCCCGTGTTCACCCGTGTCCGCCCGTGTCCGGCACATTTTGATAGTGCAGGGCG
TTTGGGGCCGGCCATTGCGG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 720; Mature: 720

Protein sequence:

>720_residues
MLKHLGLKWKIMVILVVVVPVMLGLTWYLTGTFMKLMERTAGEQSFELAYRYANKIDADMSLAMHSARSVARLTETMMGH
EGRFTREALRDGMENFLRDHPNLLGIYAAFEPDALDGADSRYMNSPYHNGDGRFVPWVHYQGGAIVTEASSGYENDDPDG
AWYHLPRKKGTEVIMEPWAYDLGGEKVLMVDMLVPLRKNGRFAGVIGVDFPMGTIDRFVREITVFGSGYGFLISAAGTYV
AHPQTDLVENKVNIFEQKDVSPELRAGLRKVLEGGDFSLKTEEDGAPFLLTFVPVFIGRAETPYIFGIKVPLNEVLAGAF
SMRNYALLAGCGATILILLLILYVARVISLPIKATVHAVEQISSGDFSVRLPADSRDEVGRMQVAVNDMAAELARNMDEI
RRQQAAAEEKTKQAEEATQQAHEARRQAEQARREGTLQAARQLEEIVAHLSVASEEISVQSREIRQGSEVQRERIASTAT
AMEEMNATVLEVARNAGETADQAKTSRDNAMEGAGVVNQTMEAMQAIKRNADGLSMNMNRLGEQAQSIGTIMNVIEDIAD
QTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGATKEVGDSIRAIQQAASQNVHAMESTVEHIDAATRLSSRSG
EVLAAIVSGVEQSADRVQSIATAAEQQSATSEEINRAVEEINQITLETARAVGEATVAAEELARQAQQLSMIVEEMKSQE

Sequences:

>Translated_720_residues
MLKHLGLKWKIMVILVVVVPVMLGLTWYLTGTFMKLMERTAGEQSFELAYRYANKIDADMSLAMHSARSVARLTETMMGH
EGRFTREALRDGMENFLRDHPNLLGIYAAFEPDALDGADSRYMNSPYHNGDGRFVPWVHYQGGAIVTEASSGYENDDPDG
AWYHLPRKKGTEVIMEPWAYDLGGEKVLMVDMLVPLRKNGRFAGVIGVDFPMGTIDRFVREITVFGSGYGFLISAAGTYV
AHPQTDLVENKVNIFEQKDVSPELRAGLRKVLEGGDFSLKTEEDGAPFLLTFVPVFIGRAETPYIFGIKVPLNEVLAGAF
SMRNYALLAGCGATILILLLILYVARVISLPIKATVHAVEQISSGDFSVRLPADSRDEVGRMQVAVNDMAAELARNMDEI
RRQQAAAEEKTKQAEEATQQAHEARRQAEQARREGTLQAARQLEEIVAHLSVASEEISVQSREIRQGSEVQRERIASTAT
AMEEMNATVLEVARNAGETADQAKTSRDNAMEGAGVVNQTMEAMQAIKRNADGLSMNMNRLGEQAQSIGTIMNVIEDIAD
QTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGATKEVGDSIRAIQQAASQNVHAMESTVEHIDAATRLSSRSG
EVLAAIVSGVEQSADRVQSIATAAEQQSATSEEINRAVEEINQITLETARAVGEATVAAEELARQAQQLSMIVEEMKSQE
>Mature_720_residues
MLKHLGLKWKIMVILVVVVPVMLGLTWYLTGTFMKLMERTAGEQSFELAYRYANKIDADMSLAMHSARSVARLTETMMGH
EGRFTREALRDGMENFLRDHPNLLGIYAAFEPDALDGADSRYMNSPYHNGDGRFVPWVHYQGGAIVTEASSGYENDDPDG
AWYHLPRKKGTEVIMEPWAYDLGGEKVLMVDMLVPLRKNGRFAGVIGVDFPMGTIDRFVREITVFGSGYGFLISAAGTYV
AHPQTDLVENKVNIFEQKDVSPELRAGLRKVLEGGDFSLKTEEDGAPFLLTFVPVFIGRAETPYIFGIKVPLNEVLAGAF
SMRNYALLAGCGATILILLLILYVARVISLPIKATVHAVEQISSGDFSVRLPADSRDEVGRMQVAVNDMAAELARNMDEI
RRQQAAAEEKTKQAEEATQQAHEARRQAEQARREGTLQAARQLEEIVAHLSVASEEISVQSREIRQGSEVQRERIASTAT
AMEEMNATVLEVARNAGETADQAKTSRDNAMEGAGVVNQTMEAMQAIKRNADGLSMNMNRLGEQAQSIGTIMNVIEDIAD
QTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGATKEVGDSIRAIQQAASQNVHAMESTVEHIDAATRLSSRSG
EVLAAIVSGVEQSADRVQSIATAAEQQSATSEEINRAVEEINQITLETARAVGEATVAAEELARQAQQLSMIVEEMKSQE

Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=262, Percent_Identity=37.0229007633588, Blast_Score=130, Evalue=4e-31,
Organism=Escherichia coli, GI1788195, Length=259, Percent_Identity=35.1351351351351, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1787690, Length=399, Percent_Identity=28.0701754385965, Blast_Score=124, Evalue=3e-29,
Organism=Escherichia coli, GI2367378, Length=361, Percent_Identity=27.1468144044321, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1789453, Length=259, Percent_Identity=30.5019305019305, Blast_Score=99, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 78701; Mature: 78701

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKHLGLKWKIMVILVVVVPVMLGLTWYLTGTFMKLMERTAGEQSFELAYRYANKIDADM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH
SLAMHSARSVARLTETMMGHEGRFTREALRDGMENFLRDHPNLLGIYAAFEPDALDGADS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
RYMNSPYHNGDGRFVPWVHYQGGAIVTEASSGYENDDPDGAWYHLPRKKGTEVIMEPWAY
CCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCCCCCEEECCCCC
DLGGEKVLMVDMLVPLRKNGRFAGVIGVDFPMGTIDRFVREITVFGSGYGFLISAAGTYV
CCCCCEEEEHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCEE
AHPQTDLVENKVNIFEQKDVSPELRAGLRKVLEGGDFSLKTEEDGAPFLLTFVPVFIGRA
ECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCC
ETPYIFGIKVPLNEVLAGAFSMRNYALLAGCGATILILLLILYVARVISLPIKATVHAVE
CCCEEEEEECCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QISSGDFSVRLPADSRDEVGRMQVAVNDMAAELARNMDEIRRQQAAAEEKTKQAEEATQQ
HHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHEARRQAEQARREGTLQAARQLEEIVAHLSVASEEISVQSREIRQGSEVQRERIASTAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AMEEMNATVLEVARNAGETADQAKTSRDNAMEGAGVVNQTMEAMQAIKRNADGLSMNMNR
HHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHH
LGEQAQSIGTIMNVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGA
HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
TKEVGDSIRAIQQAASQNVHAMESTVEHIDAATRLSSRSGEVLAAIVSGVEQSADRVQSI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ATAAEQQSATSEEINRAVEEINQITLETARAVGEATVAAEELARQAQQLSMIVEEMKSQE
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKHLGLKWKIMVILVVVVPVMLGLTWYLTGTFMKLMERTAGEQSFELAYRYANKIDADM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH
SLAMHSARSVARLTETMMGHEGRFTREALRDGMENFLRDHPNLLGIYAAFEPDALDGADS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
RYMNSPYHNGDGRFVPWVHYQGGAIVTEASSGYENDDPDGAWYHLPRKKGTEVIMEPWAY
CCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCCCCCEEECCCCC
DLGGEKVLMVDMLVPLRKNGRFAGVIGVDFPMGTIDRFVREITVFGSGYGFLISAAGTYV
CCCCCEEEEHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCEE
AHPQTDLVENKVNIFEQKDVSPELRAGLRKVLEGGDFSLKTEEDGAPFLLTFVPVFIGRA
ECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCC
ETPYIFGIKVPLNEVLAGAFSMRNYALLAGCGATILILLLILYVARVISLPIKATVHAVE
CCCEEEEEECCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QISSGDFSVRLPADSRDEVGRMQVAVNDMAAELARNMDEIRRQQAAAEEKTKQAEEATQQ
HHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHEARRQAEQARREGTLQAARQLEEIVAHLSVASEEISVQSREIRQGSEVQRERIASTAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AMEEMNATVLEVARNAGETADQAKTSRDNAMEGAGVVNQTMEAMQAIKRNADGLSMNMNR
HHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHH
LGEQAQSIGTIMNVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMGA
HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
TKEVGDSIRAIQQAASQNVHAMESTVEHIDAATRLSSRSGEVLAAIVSGVEQSADRVQSI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ATAAEQQSATSEEINRAVEEINQITLETARAVGEATVAAEELARQAQQLSMIVEEMKSQE
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]