Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78358316

Identifier: 78358316

GI number: 78358316

Start: 3267226

End: 3267930

Strand: Reverse

Name: 78358316

Synonym: Dde_3276

Alternate gene names: NA

Gene position: 3267930-3267226 (Counterclockwise)

Preceding gene: 78358318

Following gene: 78358315

Centisome position: 87.61

GC content: 60.71

Gene sequence:

>705_bases
ATGAACGAAAAAGCCATGCAGGAAGCCCTTGAGGGCGTTATCCGCAGCGTCATGGATCAGTTGGGGAGCCGCGGCGGTGA
AGTTTCCGCCTGCGGCGTGAACACGGATGAAGAAATTCCCGTGGAGCTGTCGGCGCGCCATGCCCACCTGAGCGAAGAAG
ACGCCATTGCCCTGTTCGGCGGGCCGCTCACCCCTGTGCGCGAACTTTCCCAGCCGGGACAGTTTCTGTGCAAAGAGCGT
GTACGGCTTATCGGTCCCAAAGGCGTCATCGACAACGTTGCGGTGCTCGGTCCTTCGCGCGGCCGTTCACAGGTAGAAGT
TTCCAAGACCGACGCCCGCATTCTGGGCACATCGGCCCCTGTGCGTCAGTCCGGTGACGTGGCGGGCACTCCGGGCATCA
TTCTCGCTTCGCAGGACGGTATTGTGGGGCTGGAAGAAGGTCTGATCGTCGCCGCCCGGCATATTCACATGTCTACCGAA
GACGCCGCCCGCTTCGGTGTGCACGACAACGATCTGGTCAGTGTCCGGCTTGAAGGCGAACGCCCCCTTATTCTGGAAGA
CGTGCTGGTGCGTGTCAGCGATTCGTTCAGGCTGGCCATGCATATCGACGCCGACGAAGGCAACAGCTCCGGCTGGAACA
AGAGCGTCAGCGGCAGAATAGTGGGCAGAAAGTGCGGAGCGGATAATGGACTTTGCCGCCATTGA

Upstream 100 bases:

>100_bases
CTGACACACTTTTTACAAGACGGCCATAACAGCGGAAACCGGACAGCAGGCCCACAGCGGCCGCATCAGATGCCGGATCA
TATTTGTAAGCGGAGCTATC

Downstream 100 bases:

>100_bases
TAAGCAGATAAGCGCGCTCGAGGCGTGCATAGATTCCACTGTGGAGGTCACCCCCGGCGAACAGCTGTCCGTCGGGGTCG
ACCTGGGTACGGCATACATC

Product: propanediol utilization protein-like

Products: NA

Alternate protein names: Propanediol Utilization Protein PduL; Acetate Kinase; Ethanolamine Utilization Protein; PduL Protein; Transcriptional Regulator; Propanediol Utilization Protein Family; Propanediol/Ethanolamine Utilization Protein; Propanediol Utilization; Propanediol Utilization Protein-Like

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNEKAMQEALEGVIRSVMDQLGSRGGEVSACGVNTDEEIPVELSARHAHLSEEDAIALFGGPLTPVRELSQPGQFLCKER
VRLIGPKGVIDNVAVLGPSRGRSQVEVSKTDARILGTSAPVRQSGDVAGTPGIILASQDGIVGLEEGLIVAARHIHMSTE
DAARFGVHDNDLVSVRLEGERPLILEDVLVRVSDSFRLAMHIDADEGNSSGWNKSVSGRIVGRKCGADNGLCRH

Sequences:

>Translated_234_residues
MNEKAMQEALEGVIRSVMDQLGSRGGEVSACGVNTDEEIPVELSARHAHLSEEDAIALFGGPLTPVRELSQPGQFLCKER
VRLIGPKGVIDNVAVLGPSRGRSQVEVSKTDARILGTSAPVRQSGDVAGTPGIILASQDGIVGLEEGLIVAARHIHMSTE
DAARFGVHDNDLVSVRLEGERPLILEDVLVRVSDSFRLAMHIDADEGNSSGWNKSVSGRIVGRKCGADNGLCRH
>Mature_234_residues
MNEKAMQEALEGVIRSVMDQLGSRGGEVSACGVNTDEEIPVELSARHAHLSEEDAIALFGGPLTPVRELSQPGQFLCKER
VRLIGPKGVIDNVAVLGPSRGRSQVEVSKTDARILGTSAPVRQSGDVAGTPGIILASQDGIVGLEEGLIVAARHIHMSTE
DAARFGVHDNDLVSVRLEGERPLILEDVLVRVSDSFRLAMHIDADEGNSSGWNKSVSGRIVGRKCGADNGLCRH

Specific function: Unknown

COG id: COG4869

COG function: function code Q; Propanediol utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24886; Mature: 24886

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKAMQEALEGVIRSVMDQLGSRGGEVSACGVNTDEEIPVELSARHAHLSEEDAIALFG
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEC
GPLTPVRELSQPGQFLCKERVRLIGPKGVIDNVAVLGPSRGRSQVEVSKTDARILGTSAP
CCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCCEEEEECCCC
VRQSGDVAGTPGIILASQDGIVGLEEGLIVAARHIHMSTEDAARFGVHDNDLVSVRLEGE
CCCCCCCCCCCCEEEECCCCCEECCCCEEEEEEEEECCCHHHHHCCCCCCCEEEEEECCC
RPLILEDVLVRVSDSFRLAMHIDADEGNSSGWNKSVSGRIVGRKCGADNGLCRH
CCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MNEKAMQEALEGVIRSVMDQLGSRGGEVSACGVNTDEEIPVELSARHAHLSEEDAIALFG
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEC
GPLTPVRELSQPGQFLCKERVRLIGPKGVIDNVAVLGPSRGRSQVEVSKTDARILGTSAP
CCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCCEEEEECCCC
VRQSGDVAGTPGIILASQDGIVGLEEGLIVAARHIHMSTEDAARFGVHDNDLVSVRLEGE
CCCCCCCCCCCCEEEECCCCCEECCCCEEEEEEEEECCCHHHHHCCCCCCCEEEEEECCC
RPLILEDVLVRVSDSFRLAMHIDADEGNSSGWNKSVSGRIVGRKCGADNGLCRH
CCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA