| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358316
Identifier: 78358316
GI number: 78358316
Start: 3267226
End: 3267930
Strand: Reverse
Name: 78358316
Synonym: Dde_3276
Alternate gene names: NA
Gene position: 3267930-3267226 (Counterclockwise)
Preceding gene: 78358318
Following gene: 78358315
Centisome position: 87.61
GC content: 60.71
Gene sequence:
>705_bases ATGAACGAAAAAGCCATGCAGGAAGCCCTTGAGGGCGTTATCCGCAGCGTCATGGATCAGTTGGGGAGCCGCGGCGGTGA AGTTTCCGCCTGCGGCGTGAACACGGATGAAGAAATTCCCGTGGAGCTGTCGGCGCGCCATGCCCACCTGAGCGAAGAAG ACGCCATTGCCCTGTTCGGCGGGCCGCTCACCCCTGTGCGCGAACTTTCCCAGCCGGGACAGTTTCTGTGCAAAGAGCGT GTACGGCTTATCGGTCCCAAAGGCGTCATCGACAACGTTGCGGTGCTCGGTCCTTCGCGCGGCCGTTCACAGGTAGAAGT TTCCAAGACCGACGCCCGCATTCTGGGCACATCGGCCCCTGTGCGTCAGTCCGGTGACGTGGCGGGCACTCCGGGCATCA TTCTCGCTTCGCAGGACGGTATTGTGGGGCTGGAAGAAGGTCTGATCGTCGCCGCCCGGCATATTCACATGTCTACCGAA GACGCCGCCCGCTTCGGTGTGCACGACAACGATCTGGTCAGTGTCCGGCTTGAAGGCGAACGCCCCCTTATTCTGGAAGA CGTGCTGGTGCGTGTCAGCGATTCGTTCAGGCTGGCCATGCATATCGACGCCGACGAAGGCAACAGCTCCGGCTGGAACA AGAGCGTCAGCGGCAGAATAGTGGGCAGAAAGTGCGGAGCGGATAATGGACTTTGCCGCCATTGA
Upstream 100 bases:
>100_bases CTGACACACTTTTTACAAGACGGCCATAACAGCGGAAACCGGACAGCAGGCCCACAGCGGCCGCATCAGATGCCGGATCA TATTTGTAAGCGGAGCTATC
Downstream 100 bases:
>100_bases TAAGCAGATAAGCGCGCTCGAGGCGTGCATAGATTCCACTGTGGAGGTCACCCCCGGCGAACAGCTGTCCGTCGGGGTCG ACCTGGGTACGGCATACATC
Product: propanediol utilization protein-like
Products: NA
Alternate protein names: Propanediol Utilization Protein PduL; Acetate Kinase; Ethanolamine Utilization Protein; PduL Protein; Transcriptional Regulator; Propanediol Utilization Protein Family; Propanediol/Ethanolamine Utilization Protein; Propanediol Utilization; Propanediol Utilization Protein-Like
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MNEKAMQEALEGVIRSVMDQLGSRGGEVSACGVNTDEEIPVELSARHAHLSEEDAIALFGGPLTPVRELSQPGQFLCKER VRLIGPKGVIDNVAVLGPSRGRSQVEVSKTDARILGTSAPVRQSGDVAGTPGIILASQDGIVGLEEGLIVAARHIHMSTE DAARFGVHDNDLVSVRLEGERPLILEDVLVRVSDSFRLAMHIDADEGNSSGWNKSVSGRIVGRKCGADNGLCRH
Sequences:
>Translated_234_residues MNEKAMQEALEGVIRSVMDQLGSRGGEVSACGVNTDEEIPVELSARHAHLSEEDAIALFGGPLTPVRELSQPGQFLCKER VRLIGPKGVIDNVAVLGPSRGRSQVEVSKTDARILGTSAPVRQSGDVAGTPGIILASQDGIVGLEEGLIVAARHIHMSTE DAARFGVHDNDLVSVRLEGERPLILEDVLVRVSDSFRLAMHIDADEGNSSGWNKSVSGRIVGRKCGADNGLCRH >Mature_234_residues MNEKAMQEALEGVIRSVMDQLGSRGGEVSACGVNTDEEIPVELSARHAHLSEEDAIALFGGPLTPVRELSQPGQFLCKER VRLIGPKGVIDNVAVLGPSRGRSQVEVSKTDARILGTSAPVRQSGDVAGTPGIILASQDGIVGLEEGLIVAARHIHMSTE DAARFGVHDNDLVSVRLEGERPLILEDVLVRVSDSFRLAMHIDADEGNSSGWNKSVSGRIVGRKCGADNGLCRH
Specific function: Unknown
COG id: COG4869
COG function: function code Q; Propanediol utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24886; Mature: 24886
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKAMQEALEGVIRSVMDQLGSRGGEVSACGVNTDEEIPVELSARHAHLSEEDAIALFG CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEC GPLTPVRELSQPGQFLCKERVRLIGPKGVIDNVAVLGPSRGRSQVEVSKTDARILGTSAP CCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCCEEEEECCCC VRQSGDVAGTPGIILASQDGIVGLEEGLIVAARHIHMSTEDAARFGVHDNDLVSVRLEGE CCCCCCCCCCCCEEEECCCCCEECCCCEEEEEEEEECCCHHHHHCCCCCCCEEEEEECCC RPLILEDVLVRVSDSFRLAMHIDADEGNSSGWNKSVSGRIVGRKCGADNGLCRH CCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MNEKAMQEALEGVIRSVMDQLGSRGGEVSACGVNTDEEIPVELSARHAHLSEEDAIALFG CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEC GPLTPVRELSQPGQFLCKERVRLIGPKGVIDNVAVLGPSRGRSQVEVSKTDARILGTSAP CCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCCEEEEECCCC VRQSGDVAGTPGIILASQDGIVGLEEGLIVAARHIHMSTEDAARFGVHDNDLVSVRLEGE CCCCCCCCCCCCEEEECCCCCEECCCCEEEEEEEEECCCHHHHHCCCCCCCEEEEEECCC RPLILEDVLVRVSDSFRLAMHIDADEGNSSGWNKSVSGRIVGRKCGADNGLCRH CCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA