| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358193
Identifier: 78358193
GI number: 78358193
Start: 3140022
End: 3140486
Strand: Reverse
Name: 78358193
Synonym: Dde_3153
Alternate gene names: NA
Gene position: 3140486-3140022 (Counterclockwise)
Preceding gene: 78358194
Following gene: 78358192
Centisome position: 84.19
GC content: 57.2
Gene sequence:
>465_bases ATGACCGGTTATCTGCTCGGCAATCTTGTCCGCCAGAAAGGCGCGCTGCACTATCTTGAAACACTGCTTGAGGAAGAGTT TTCCCACCTGCGTGAACGTCGTCCCGATGATGTGAGCCATGTGGAGATGATGATTCATGAACTGGTGCGTCAGGTGGCTT CCGAGCGTGTGGAGCTTAAGGAAGCCATGAACGGCGTGCGTCTGCAGGAATACTGCGACAGTCTGGATGAAGAGACGGCG GCTCCTGTGCGTGATGCCCTGCAGCGCATCGACGAACTTGAGCAGACCTGTTCGCGTATGGCTTCGCGCAATGCAGAGCT GGCGCTGGCGCTTATGGATCAGAGCCAGAAAATGCTTTCTTTCATGCATGAACGTATCCAGCCGGATACCCGTATGACCT ACGGCGGCCGCGGGCGCTACACCACCCACAGACCTCAGGCCGCACTGCTCAGCGGGAGGCTGTAA
Upstream 100 bases:
>100_bases AACTGCGTCAGGGTGAACTTGCATGGAACCCCGAGCAGATCAGAAACCGGCTGATGGCGGGGCTTTCCATAGGTAAACGC GGCTGACGGAGGTAAAGGAT
Downstream 100 bases:
>100_bases TGACGCTTAACTCGCTGCTCAGCGTGGGCAAGGATGCGCTGTTTGCGTCGCAGAGCGCCATCCAGACCACAGGTAACAAT ATCGCCAACGTGAACACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: FlgN Protein
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTGYLLGNLVRQKGALHYLETLLEEEFSHLRERRPDDVSHVEMMIHELVRQVASERVELKEAMNGVRLQEYCDSLDEETA APVRDALQRIDELEQTCSRMASRNAELALALMDQSQKMLSFMHERIQPDTRMTYGGRGRYTTHRPQAALLSGRL
Sequences:
>Translated_154_residues MTGYLLGNLVRQKGALHYLETLLEEEFSHLRERRPDDVSHVEMMIHELVRQVASERVELKEAMNGVRLQEYCDSLDEETA APVRDALQRIDELEQTCSRMASRNAELALALMDQSQKMLSFMHERIQPDTRMTYGGRGRYTTHRPQAALLSGRL >Mature_153_residues TGYLLGNLVRQKGALHYLETLLEEEFSHLRERRPDDVSHVEMMIHELVRQVASERVELKEAMNGVRLQEYCDSLDEETAA PVRDALQRIDELEQTCSRMASRNAELALALMDQSQKMLSFMHERIQPDTRMTYGGRGRYTTHRPQAALLSGRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17789; Mature: 17657
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGYLLGNLVRQKGALHYLETLLEEEFSHLRERRPDDVSHVEMMIHELVRQVASERVELK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH EAMNGVRLQEYCDSLDEETAAPVRDALQRIDELEQTCSRMASRNAELALALMDQSQKMLS HHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FMHERIQPDTRMTYGGRGRYTTHRPQAALLSGRL HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure TGYLLGNLVRQKGALHYLETLLEEEFSHLRERRPDDVSHVEMMIHELVRQVASERVELK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH EAMNGVRLQEYCDSLDEETAAPVRDALQRIDELEQTCSRMASRNAELALALMDQSQKMLS HHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FMHERIQPDTRMTYGGRGRYTTHRPQAALLSGRL HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA