| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358183
Identifier: 78358183
GI number: 78358183
Start: 3132987
End: 3133250
Strand: Reverse
Name: 78358183
Synonym: Dde_3143
Alternate gene names: NA
Gene position: 3133250-3132987 (Counterclockwise)
Preceding gene: 78358184
Following gene: 78358177
Centisome position: 84.0
GC content: 48.86
Gene sequence:
>264_bases TTGTCTTATCAGGACCGGCAGAAACAGACGGCGTCGCCTCTCTGCTACTATCCGTTTTTTTATGGTTCTTTAGCACAGGA AGATGAGGCAAAAGAAAAAGCACTCATGCGCGGGCATGAGTGCTTATCTTCATTTTGGCGTCCCCAAGGGGATTTGAACC CCTGTCGCCTGCGTGAAAGGCAGAAATGCCAGCCAAGCAAAGCTGGTTACAGCAATAAAATCAACAATGTCTTGGCTGCA CTTGTCAGCCGTAGGCACGTTTGA
Upstream 100 bases:
>100_bases TCAGTGGGATATCTGGAAGCAGGGATATCTGGAAGCATTGTATAGCCGGAAAAGGTGACATGCCTCGCTAGGCTAGCTGA GTCCGGGCGGCTTCGAGCAT
Downstream 100 bases:
>100_bases CACGGATTCTGACACGTCATGGACACGCTGCAAACAAAGCGGCGATCAGCGTCAGTACGTTGTCTTAGTCATTTTAACAG CCATTATATTATTTCATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSYQDRQKQTASPLCYYPFFYGSLAQEDEAKEKALMRGHECLSSFWRPQGDLNPCRLRERQKCQPSKAGYSNKINNVLAA LVSRRHV
Sequences:
>Translated_87_residues MSYQDRQKQTASPLCYYPFFYGSLAQEDEAKEKALMRGHECLSSFWRPQGDLNPCRLRERQKCQPSKAGYSNKINNVLAA LVSRRHV >Mature_86_residues SYQDRQKQTASPLCYYPFFYGSLAQEDEAKEKALMRGHECLSSFWRPQGDLNPCRLRERQKCQPSKAGYSNKINNVLAAL VSRRHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10099; Mature: 9967
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYQDRQKQTASPLCYYPFFYGSLAQEDEAKEKALMRGHECLSSFWRPQGDLNPCRLRER CCCCCCHHHCCCCEEEHHHHHCCHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH QKCQPSKAGYSNKINNVLAALVSRRHV HCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SYQDRQKQTASPLCYYPFFYGSLAQEDEAKEKALMRGHECLSSFWRPQGDLNPCRLRER CCCCCHHHCCCCEEEHHHHHCCHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH QKCQPSKAGYSNKINNVLAALVSRRHV HCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA