Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78357684
Identifier: 78357684
GI number: 78357684
Start: 2659390
End: 2660151
Strand: Direct
Name: 78357684
Synonym: Dde_2642
Alternate gene names: NA
Gene position: 2659390-2660151 (Clockwise)
Preceding gene: 161485607
Following gene: 78357685
Centisome position: 71.29
GC content: 62.6
Gene sequence:
>762_bases ATGAAAAAACAGATACGCAAAATAATACAGATAGATGAAGAGCGCTGCGATGGCTGCGGCCTGTGCGTGCTCGACTGTGC CGAAGGCGCCATAGCCATCATCGACGGCAAGGCGAAACTGGTCAAGGATTCCTACTGCGACGGGTTGGGAGCCTGTCTGG GTGCCTGCCCGCAGGATGCCCTGCACATCATAGAGCGCGAAGCCGACGAATTTGACGAGGAAGCCGCCATGGAACACGTA CGCCGGCGCGATGCCGCGACCGGACAACCGCCGCAGCCCGTACGCCCGCATCATTCAGGGGGCTGCCCCGGGTCCATGGT ACGCTCGTTCGGCGCAACCGGACAGCAGAGCCCGCAGCTGGCACAGGCTCATCAGCCGGCCGCCGGTCCCGGCCACTGGC CGCTCAAAATACGGCTGGTGCCGCCCACAGCGCCGTTTCTCAAAGGGGCCGACGTGCTTGTGGCCGCCGACTGCGCGGCT GCCGCTTCGCCTCAGTTTCACAGCCGGTTTGCCGCAGGCAAAGTGGTGCTCATAGGCTGCCCGAAATTTGACGATACCGC AGCCTACGCCCAGCGGCTTGCCGACATACTGACAACCAGCGGCATAGCTTCTCTCACCGTGCTGCGCATGGAGGTACCCT GCTGCAGAGGCCTTTCAGAAGCGGTGAACAGCGCTGTGCGCCAGTCCGGCAGTTCCGTGCAGATAAACGAGGTCATCATG ACCTGTCAGGGGCACGAGGCGCAGAACACCCTTTTCGGCTGA
Upstream 100 bases:
>100_bases CCTGCGGCCATGCGCACCCGGAGTACCCGCAAGCACACAGTGCGGTACCGGCAAACACACCGCCGCTCTCATGCGGCATC AGTCACACGGGGGAAATATA
Downstream 100 bases:
>100_bases CGGCAATGCCGGCCGGCACAGGCCCCGCCGCTGACGGCGGGGCTTTTTTGCGTCCGGCCGTCAGCAGATAAGATTCTCAT GGCTGCAGGGCTGACACCCC
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKKQIRKIIQIDEERCDGCGLCVLDCAEGAIAIIDGKAKLVKDSYCDGLGACLGACPQDALHIIEREADEFDEEAAMEHV RRRDAATGQPPQPVRPHHSGGCPGSMVRSFGATGQQSPQLAQAHQPAAGPGHWPLKIRLVPPTAPFLKGADVLVAADCAA AASPQFHSRFAAGKVVLIGCPKFDDTAAYAQRLADILTTSGIASLTVLRMEVPCCRGLSEAVNSAVRQSGSSVQINEVIM TCQGHEAQNTLFG
Sequences:
>Translated_253_residues MKKQIRKIIQIDEERCDGCGLCVLDCAEGAIAIIDGKAKLVKDSYCDGLGACLGACPQDALHIIEREADEFDEEAAMEHV RRRDAATGQPPQPVRPHHSGGCPGSMVRSFGATGQQSPQLAQAHQPAAGPGHWPLKIRLVPPTAPFLKGADVLVAADCAA AASPQFHSRFAAGKVVLIGCPKFDDTAAYAQRLADILTTSGIASLTVLRMEVPCCRGLSEAVNSAVRQSGSSVQINEVIM TCQGHEAQNTLFG >Mature_253_residues MKKQIRKIIQIDEERCDGCGLCVLDCAEGAIAIIDGKAKLVKDSYCDGLGACLGACPQDALHIIEREADEFDEEAAMEHV RRRDAATGQPPQPVRPHHSGGCPGSMVRSFGATGQQSPQLAQAHQPAAGPGHWPLKIRLVPPTAPFLKGADVLVAADCAA AASPQFHSRFAAGKVVLIGCPKFDDTAAYAQRLADILTTSGIASLTVLRMEVPCCRGLSEAVNSAVRQSGSSVQINEVIM TCQGHEAQNTLFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26724; Mature: 26724
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQIRKIIQIDEERCDGCGLCVLDCAEGAIAIIDGKAKLVKDSYCDGLGACLGACPQDA CHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHH LHIIEREADEFDEEAAMEHVRRRDAATGQPPQPVRPHHSGGCPGSMVRSFGATGQQSPQL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHH AQAHQPAAGPGHWPLKIRLVPPTAPFLKGADVLVAADCAAAASPQFHSRFAAGKVVLIGC HHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECHHHHCCCHHHHHHCCCCEEEEEC PKFDDTAAYAQRLADILTTSGIASLTVLRMEVPCCRGLSEAVNSAVRQSGSSVQINEVIM CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCCEEEEHEEE TCQGHEAQNTLFG ECCCCCCCCCCCC >Mature Secondary Structure MKKQIRKIIQIDEERCDGCGLCVLDCAEGAIAIIDGKAKLVKDSYCDGLGACLGACPQDA CHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHH LHIIEREADEFDEEAAMEHVRRRDAATGQPPQPVRPHHSGGCPGSMVRSFGATGQQSPQL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHH AQAHQPAAGPGHWPLKIRLVPPTAPFLKGADVLVAADCAAAASPQFHSRFAAGKVVLIGC HHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECHHHHCCCHHHHHHCCCCEEEEEC PKFDDTAAYAQRLADILTTSGIASLTVLRMEVPCCRGLSEAVNSAVRQSGSSVQINEVIM CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCCEEEEHEEE TCQGHEAQNTLFG ECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]