Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78357685
Identifier: 78357685
GI number: 78357685
Start: 2660300
End: 2660806
Strand: Direct
Name: 78357685
Synonym: Dde_2643
Alternate gene names: NA
Gene position: 2660300-2660806 (Clockwise)
Preceding gene: 78357684
Following gene: 78357687
Centisome position: 71.32
GC content: 58.19
Gene sequence:
>507_bases ATGCAGCCCGTCAAAAAAATACTATACGCCACCGATCTTTCAGAAGATTCCCGCCATGCGCTTTCGTACGCGTTCAGTCT GGCGCAACAGTACGGAGCAGCGCTGCATGTGCTGCATGTGCTGCCGGACGTAAAGCAGAACTACCTGACCACATCGGGGC TGGATTTCGCCACAGTGTTTGACGATGCCACATGGCGGCTGTTCACTCCGGAACAGCTTGTGGAAGCCAAACACAAGGTA AGAGAGCGCATTACGGGCATATGCAGTCTGGAAGGACTGGCGGACACAGCCTGCATGCCCGTGGCGGAAAACATCGAGGT GGCCGTGGGGCAACCTGCCGATGTCATTCTGGAACGCGCCCCGCAATTTGACATGGTGGTCATGGGTACTCAGGGACACG GACGGTTGGCCGGTCTGCTGCTGGGCAGCGTGACCCAGAAAGTCGTTTCGCGCTGCCCGGTGCCTGTTCTGGTGGTCCGC CTGCCGGAAGCTGATCACAAGGTCTGA
Upstream 100 bases:
>100_bases TGCGTCCGGCCGTCAGCAGATAAGATTCTCATGGCTGCAGGGCTGACACCCCCCGCAGCCGTTGTTATATCCATGGTAAA CCAGCAGTAAGGGAGGTTTT
Downstream 100 bases:
>100_bases CAGACCGGCAGCACATACACAGCGGCCCCGCTACGCGCTACAGCGACTCATGCCCTTCGGCCAGTGCGGTCAGGTATTCA CGGTCTGTAATGGTGATGGT
Product: universal stress protein UspA-like protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; Bile AcidSodium Symporter
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MQPVKKILYATDLSEDSRHALSYAFSLAQQYGAALHVLHVLPDVKQNYLTTSGLDFATVFDDATWRLFTPEQLVEAKHKV RERITGICSLEGLADTACMPVAENIEVAVGQPADVILERAPQFDMVVMGTQGHGRLAGLLLGSVTQKVVSRCPVPVLVVR LPEADHKV
Sequences:
>Translated_168_residues MQPVKKILYATDLSEDSRHALSYAFSLAQQYGAALHVLHVLPDVKQNYLTTSGLDFATVFDDATWRLFTPEQLVEAKHKV RERITGICSLEGLADTACMPVAENIEVAVGQPADVILERAPQFDMVVMGTQGHGRLAGLLLGSVTQKVVSRCPVPVLVVR LPEADHKV >Mature_168_residues MQPVKKILYATDLSEDSRHALSYAFSLAQQYGAALHVLHVLPDVKQNYLTTSGLDFATVFDDATWRLFTPEQLVEAKHKV RERITGICSLEGLADTACMPVAENIEVAVGQPADVILERAPQFDMVVMGTQGHGRLAGLLLGSVTQKVVSRCPVPVLVVR LPEADHKV
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18362; Mature: 18362
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPVKKILYATDLSEDSRHALSYAFSLAQQYGAALHVLHVLPDVKQNYLTTSGLDFATVF CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE DDATWRLFTPEQLVEAKHKVRERITGICSLEGLADTACMPVAENIEVAVGQPADVILERA CCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEECCCHHHHHHCC PQFDMVVMGTQGHGRLAGLLLGSVTQKVVSRCPVPVLVVRLPEADHKV CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC >Mature Secondary Structure MQPVKKILYATDLSEDSRHALSYAFSLAQQYGAALHVLHVLPDVKQNYLTTSGLDFATVF CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE DDATWRLFTPEQLVEAKHKVRERITGICSLEGLADTACMPVAENIEVAVGQPADVILERA CCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEECCCHHHHHHCC PQFDMVVMGTQGHGRLAGLLLGSVTQKVVSRCPVPVLVVRLPEADHKV CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA