Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78357670
Identifier: 78357670
GI number: 78357670
Start: 2644389
End: 2645168
Strand: Direct
Name: 78357670
Synonym: Dde_2628
Alternate gene names: NA
Gene position: 2644389-2645168 (Clockwise)
Preceding gene: 78357669
Following gene: 78357671
Centisome position: 70.89
GC content: 58.97
Gene sequence:
>780_bases ATGTATTACATAGCAACCATGAACGTTTTGCATGCAGCTGCGCCGCGTAGCGCGTTTTCAACCGGCACATCCACAGGCAG ACAACTGCGCCTGCGCCGCACAAAGACGGCATGCCGTGCAGTGCTGCTTGCACTGCTGTTTGCGGTATTGCCTGCAGCGG CCTTTGCTGCCGGTGCAACGTCTCCGGTGCAGTCATCCGGCACCGGTGCAACAGATATTACAGGTGAAGATACTGCTGTA CCGGCAGGTTATCGGGGCAGCTACTATACTTTTGCACTGGGCTTTACCGGCAGCGGAAACGAGGCGGAAGTGCTGCGCAA GCTGGATGAGGCAGCCCGGCATGACGAACCCGTGCTGCTTTTTGCCGTCACTCCGGCGGCAGATACGGCAGGTTCTCTGC TTGCAGTGCCCATCACGCCGGAAATCAGCCTGCTGGGCGATTCGTCCGGTGCGCAAGACCTGACCACCTTTTCTGCAGAG ACATATGGCAACGCCCGTGCCACGCTGTACTATTCCGATGCCCCCGACTGGGCCATCCGCTCGCAGATTGCCACCGATGT GGTGCCCGTGCCCGCAGGAGATGACGCACAGCGCATGGCTCTGGAAATGCAGGGAGTACGCGCCGGAATATACATGGACT GGTCCCCCACCGAACGTCTGCAGCTTTCTTTCGGGCCTGAATACGGCACGGCCAGAAACATTCCCCTGCTGGGAAATCCC AACCCTGCAGAAGCAGAACATGGCGCCGGAGCCCGTTTTCATTTCCGCTGGAATTTCTGA
Upstream 100 bases:
>100_bases CGCTCCGCAGAGAGCGCGGCTTTTTTTACATCCTGCCTGCGGCCGCAGACCCCGTCATCACGCCCCGCAGCCCTGTTTTT TTTCTTGCCCTGCCCGCAAA
Downstream 100 bases:
>100_bases CGGTGTGCCGTTGGCAAACCGGCCGCCCGCACCGCGGGCACAACACAGCTGACCTGCCACCGGAAATCGGGTCCGGTCTG TACAACCTGCGCCTGAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MYYIATMNVLHAAAPRSAFSTGTSTGRQLRLRRTKTACRAVLLALLFAVLPAAAFAAGATSPVQSSGTGATDITGEDTAV PAGYRGSYYTFALGFTGSGNEAEVLRKLDEAARHDEPVLLFAVTPAADTAGSLLAVPITPEISLLGDSSGAQDLTTFSAE TYGNARATLYYSDAPDWAIRSQIATDVVPVPAGDDAQRMALEMQGVRAGIYMDWSPTERLQLSFGPEYGTARNIPLLGNP NPAEAEHGAGARFHFRWNF
Sequences:
>Translated_259_residues MYYIATMNVLHAAAPRSAFSTGTSTGRQLRLRRTKTACRAVLLALLFAVLPAAAFAAGATSPVQSSGTGATDITGEDTAV PAGYRGSYYTFALGFTGSGNEAEVLRKLDEAARHDEPVLLFAVTPAADTAGSLLAVPITPEISLLGDSSGAQDLTTFSAE TYGNARATLYYSDAPDWAIRSQIATDVVPVPAGDDAQRMALEMQGVRAGIYMDWSPTERLQLSFGPEYGTARNIPLLGNP NPAEAEHGAGARFHFRWNF >Mature_259_residues MYYIATMNVLHAAAPRSAFSTGTSTGRQLRLRRTKTACRAVLLALLFAVLPAAAFAAGATSPVQSSGTGATDITGEDTAV PAGYRGSYYTFALGFTGSGNEAEVLRKLDEAARHDEPVLLFAVTPAADTAGSLLAVPITPEISLLGDSSGAQDLTTFSAE TYGNARATLYYSDAPDWAIRSQIATDVVPVPAGDDAQRMALEMQGVRAGIYMDWSPTERLQLSFGPEYGTARNIPLLGNP NPAEAEHGAGARFHFRWNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27426; Mature: 27426
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYIATMNVLHAAAPRSAFSTGTSTGRQLRLRRTKTACRAVLLALLFAVLPAAAFAAGAT CEEEEEEHHHHHCCCCCHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SPVQSSGTGATDITGEDTAVPAGYRGSYYTFALGFTGSGNEAEVLRKLDEAARHDEPVLL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEE FAVTPAADTAGSLLAVPITPEISLLGDSSGAQDLTTFSAETYGNARATLYYSDAPDWAIR EEECCCCCCCCCEEEEECCCCEEEEECCCCCCHHEEEEHHCCCCEEEEEEECCCCCHHHH SQIATDVVPVPAGDDAQRMALEMQGVRAGIYMDWSPTERLQLSFGPEYGTARNIPLLGNP HHHHHCEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCC NPAEAEHGAGARFHFRWNF CCCCCCCCCCCEEEEEECC >Mature Secondary Structure MYYIATMNVLHAAAPRSAFSTGTSTGRQLRLRRTKTACRAVLLALLFAVLPAAAFAAGAT CEEEEEEHHHHHCCCCCHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SPVQSSGTGATDITGEDTAVPAGYRGSYYTFALGFTGSGNEAEVLRKLDEAARHDEPVLL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEE FAVTPAADTAGSLLAVPITPEISLLGDSSGAQDLTTFSAETYGNARATLYYSDAPDWAIR EEECCCCCCCCCEEEEECCCCEEEEECCCCCCHHEEEEHHCCCCEEEEEEECCCCCHHHH SQIATDVVPVPAGDDAQRMALEMQGVRAGIYMDWSPTERLQLSFGPEYGTARNIPLLGNP HHHHHCEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCC NPAEAEHGAGARFHFRWNF CCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA