Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78357669
Identifier: 78357669
GI number: 78357669
Start: 2643404
End: 2644267
Strand: Direct
Name: 78357669
Synonym: Dde_2627
Alternate gene names: NA
Gene position: 2643404-2644267 (Clockwise)
Preceding gene: 78357668
Following gene: 78357670
Centisome position: 70.86
GC content: 58.45
Gene sequence:
>864_bases ATGGCAAGACGTTGTGGTGTTGTTCTCTCTCTGCTTGCTTTTCTGCTGCTGGGGGCCGCCGGTGCCCGGGCCGAAAGCGA GCACACACTGAAACTCAACCTCGAAAGCGCGTACACAGCCAAGGCCGACCTTGATGACGGCGGCTCCTTTGCGCGCACAT CGACCAGAGTGCGGGCAACATGGAACGAGTTTTCGTTCTTTTACCGTAACGACAACTATGACTGGAGCGACACTTCCGGC ATGCGCTTCGGCAGAGACGGCAAGACGCCCTTTGAAAACCTGCAGCGCATCGGCGTGATGTACAACGACACGTTCCGCAT CAGCGGACCGTGGTTCACCACTGCCTCGCTGGGCATCACGTCCATGTTCGAAGAAGATTTCGTCAATGACAATCTGACGT TCTTCGGCGGCGGCATGGTGGGGTATGCCTTCAGCCCGCAGGCTTCTGTGGCGGCTGGTATTGCCGGCATACGCACTCCG CTGAAAACATACGCCTTCCCCATGTTCAGCGCACGCTATGCAGAAGGCCCGTGGACCCTGCAGCTGGGCTTTCCCAAAAC GGAAGCACGCTATGCCGTGTCTGAGGCGCTGGATGTGCGGCTGGCAGCCGATTACGACATCGGAGTATACAGACTGCGCG ACCACAGCCCGCTTGCCAAAGAAGGCTTTCTTGAAATGCGCGAAATCATCACCGGTCTGTACCTTGACTGGAAGCCTCTG GACGGGCTGGTGCTTTCCGCCGGTCCCGAGCTTGTCTGGGGCCGCAGCATGAAGGTTTACGACGACAACGAAAACAGACG ATGGGACAAGCAGGAGCCCGACGCTGCCGCAGGCGGCCGGATCAGCATTTCCTACTCATTCTAG
Upstream 100 bases:
>100_bases GGTGGACAGACGCCTTGCCGAAATGGGCAGGCTGGCCACCAGAGCATTCCGCTCGCGCTGATTCCGACGGATCAGAAAAC CTTTTACAGGAGTCACTTTG
Downstream 100 bases:
>100_bases CCTCAGGGCATTCAACGGCCGCGCTCCGCAGAGAGCGCGGCTTTTTTTACATCCTGCCTGCGGCCGCAGACCCCGTCATC ACGCCCCGCAGCCCTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MARRCGVVLSLLAFLLLGAAGARAESEHTLKLNLESAYTAKADLDDGGSFARTSTRVRATWNEFSFFYRNDNYDWSDTSG MRFGRDGKTPFENLQRIGVMYNDTFRISGPWFTTASLGITSMFEEDFVNDNLTFFGGGMVGYAFSPQASVAAGIAGIRTP LKTYAFPMFSARYAEGPWTLQLGFPKTEARYAVSEALDVRLAADYDIGVYRLRDHSPLAKEGFLEMREIITGLYLDWKPL DGLVLSAGPELVWGRSMKVYDDNENRRWDKQEPDAAAGGRISISYSF
Sequences:
>Translated_287_residues MARRCGVVLSLLAFLLLGAAGARAESEHTLKLNLESAYTAKADLDDGGSFARTSTRVRATWNEFSFFYRNDNYDWSDTSG MRFGRDGKTPFENLQRIGVMYNDTFRISGPWFTTASLGITSMFEEDFVNDNLTFFGGGMVGYAFSPQASVAAGIAGIRTP LKTYAFPMFSARYAEGPWTLQLGFPKTEARYAVSEALDVRLAADYDIGVYRLRDHSPLAKEGFLEMREIITGLYLDWKPL DGLVLSAGPELVWGRSMKVYDDNENRRWDKQEPDAAAGGRISISYSF >Mature_286_residues ARRCGVVLSLLAFLLLGAAGARAESEHTLKLNLESAYTAKADLDDGGSFARTSTRVRATWNEFSFFYRNDNYDWSDTSGM RFGRDGKTPFENLQRIGVMYNDTFRISGPWFTTASLGITSMFEEDFVNDNLTFFGGGMVGYAFSPQASVAAGIAGIRTPL KTYAFPMFSARYAEGPWTLQLGFPKTEARYAVSEALDVRLAADYDIGVYRLRDHSPLAKEGFLEMREIITGLYLDWKPLD GLVLSAGPELVWGRSMKVYDDNENRRWDKQEPDAAAGGRISISYSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32041; Mature: 31910
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRCGVVLSLLAFLLLGAAGARAESEHTLKLNLESAYTAKADLDDGGSFARTSTRVRAT CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEEECCEEEEEE WNEFSFFYRNDNYDWSDTSGMRFGRDGKTPFENLQRIGVMYNDTFRISGPWFTTASLGIT CCCEEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHCEEECCEEEECCCEEEEHHCCHH SMFEEDFVNDNLTFFGGGMVGYAFSPQASVAAGIAGIRTPLKTYAFPMFSARYAEGPWTL HHHHHHHCCCCEEEEECCEEEEEECCCHHHHHHHHHHHCCHHHHHCHHHHCEECCCCEEE QLGFPKTEARYAVSEALDVRLAADYDIGVYRLRDHSPLAKEGFLEMREIITGLYLDWKPL EECCCCCHHHHHHHHHHEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHEEEEECC DGLVLSAGPELVWGRSMKVYDDNENRRWDKQEPDAAAGGRISISYSF CCEEEECCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure ARRCGVVLSLLAFLLLGAAGARAESEHTLKLNLESAYTAKADLDDGGSFARTSTRVRAT CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEEECCEEEEEE WNEFSFFYRNDNYDWSDTSGMRFGRDGKTPFENLQRIGVMYNDTFRISGPWFTTASLGIT CCCEEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHCEEECCEEEECCCEEEEHHCCHH SMFEEDFVNDNLTFFGGGMVGYAFSPQASVAAGIAGIRTPLKTYAFPMFSARYAEGPWTL HHHHHHHCCCCEEEEECCEEEEEECCCHHHHHHHHHHHCCHHHHHCHHHHCEECCCCEEE QLGFPKTEARYAVSEALDVRLAADYDIGVYRLRDHSPLAKEGFLEMREIITGLYLDWKPL EECCCCCHHHHHHHHHHEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHEEEEECC DGLVLSAGPELVWGRSMKVYDDNENRRWDKQEPDAAAGGRISISYSF CCEEEECCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA