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The map label for this gene is recN [H]

Identifier: 78357638

GI number: 78357638

Start: 2612838

End: 2614451

Strand: Direct

Name: recN [H]

Synonym: Dde_2596

Alternate gene names: 78357638

Gene position: 2612838-2614451 (Clockwise)

Preceding gene: 78357636

Following gene: 78357639

Centisome position: 70.04

GC content: 57.99

Gene sequence:

>1614_bases
ATGCTAGAACTGCTTAGAATCCGAAATCTCGCGCTGATCGAAGATATGGAGCTGGAGTTCGCTCCCGGTATGAATGTACT
CACCGGTGAAACCGGTGCCGGTAAAAGCTTTATCCTCAAGGCGCTCAATTTTCTTACCGGCGACAGATTGTCAGCCGACA
TCGTGCGCGCCGGAGCTGATAAAGCCACGGTTGAGGCGTTGTTCGCCCTTTCCGACGGCGATCTTATCATCCGCAGAGAA
CTGACCGCCCACAGCGGACGCAGCCGTCTTTTTATCAACGACAAGCTGAGTTCGCAGGAAACCGTGCGCGACATGCGCTC
TTCTCTTATCATCCATACAAGCCAGCACGGGCAGCAGAAACTGCTGCAGCCCTCTTTTCAGGCTGCGTTGCTGGACACGT
ACATGAACCGCCCCGACCTGCTGGAGCAGCGGGACAGCCTGTTGCGCAGCCTGCGCAGCCTTACCGAAGAAAAAGAAGCC
CTGCATGAACGCAGCCGGTCGCTGGCCGACAGGCGGGAACTGCTGGAATTTCAGCAGCAGGAGATAGCCAAGGTTGACCC
GCAGCCCGGTGAAGAGGATGCGCTGCTTGAACGTAAACGCCTGCTGCGGGGCCAGACTCAATCAAAGCAACTGGTTGAGG
ATGCGCTTTCGTGTCTTGGCGGGTACGAGGGCGGTATCATTCCCGCGCTGGGCACGCTGGAAAGCACTCTGCGCCAGCTG
GCCGCGGCTCTGCCGGAATACGAGGAGGACGCAACCACCGTGTCCGGCTTCAGGCAGACGCTGCATGACATCGAAGGACG
CCTGCGCCGTCAGCCTGTGCACGATGCAGACGAGGAAGATCTGGAAGAAATCGAAGCCCGGCTATACGAACTTGCGCAAC
TGAAGCGCAAGCTCAAACGCTCGCTGGATGAGATTGTTGACCTGCAGCGGGAAATCGAGGAAAACCTGTCATTTCTAGAT
TCGTGCGGACTGGACCTGAAACGGATAGCACGGCAGGAGCAGGAAACCCGTGAAAAGCTGGCCGCTCTGCTGGAAAAGCT
GAATCCGGCACGCCGCAAAGCAGGTGAAAAACTGGCGGCGGACATTGTTGCGGAGCTGAAAGGGCTGGGTTTTTCCGATC
AGGTGCAGGTACGTTTTACCCATACTCCGCACAAGCTGGCAGAAAACTGCATTGAAGAAAAAGCCGGAATGCTGTGGCTG
CCCAACCCGGGCCAGCCCCCGCAGCCGCTGGATAAAATTGCCTCCGGTGGTGAGCTTTCACGTTTTCTGCTGGCCGTGGT
GGGACTGATGGCCAGAGAGGAATCGGCCACGCTGATTTTTGACGAGGTGGATTCCGGCGTGGGCGGACTGACATTGAACA
GCGTTGCAGAGCGCCTGCGCTCGCTGGCATCGCAACGGCAGATGCTGCTGATAACACACTGGCCGCAGCTGGCGGCCAAG
GCCCAGCGTCACTTTCATGTCCGCAAAGAAGTACATGACGACGCCACATACACCTACTGCACGGCACTGGATGCAAAAGG
CATAAGCAACGAGCTGAGCCGCATGGCCGGCGGCGGTGAACAGGGAGAAGCCTTTGCAGGCAATCTGCTGACACCGCACC
TGCAGCATCGCTGA

Upstream 100 bases:

>100_bases
GTTATGCGGCATTACCTCTTGCCGCCCTATACTCTTGAGGGTAGATACGGTAAAAAAAGTTTTCGCCCAAACCTGTCACC
AGTATGTAGTGCACTGAATC

Downstream 100 bases:

>100_bases
AGCGGAAAAGACCGAGGAGACCCGCATGGAACCAACGGACAACATGTCCCAGCAGGAACGGTTTTCCGCGTATGCGGCCA
GACTCAGCAAAATGAAAGAA

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MLELLRIRNLALIEDMELEFAPGMNVLTGETGAGKSFILKALNFLTGDRLSADIVRAGADKATVEALFALSDGDLIIRRE
LTAHSGRSRLFINDKLSSQETVRDMRSSLIIHTSQHGQQKLLQPSFQAALLDTYMNRPDLLEQRDSLLRSLRSLTEEKEA
LHERSRSLADRRELLEFQQQEIAKVDPQPGEEDALLERKRLLRGQTQSKQLVEDALSCLGGYEGGIIPALGTLESTLRQL
AAALPEYEEDATTVSGFRQTLHDIEGRLRRQPVHDADEEDLEEIEARLYELAQLKRKLKRSLDEIVDLQREIEENLSFLD
SCGLDLKRIARQEQETREKLAALLEKLNPARRKAGEKLAADIVAELKGLGFSDQVQVRFTHTPHKLAENCIEEKAGMLWL
PNPGQPPQPLDKIASGGELSRFLLAVVGLMAREESATLIFDEVDSGVGGLTLNSVAERLRSLASQRQMLLITHWPQLAAK
AQRHFHVRKEVHDDATYTYCTALDAKGISNELSRMAGGGEQGEAFAGNLLTPHLQHR

Sequences:

>Translated_537_residues
MLELLRIRNLALIEDMELEFAPGMNVLTGETGAGKSFILKALNFLTGDRLSADIVRAGADKATVEALFALSDGDLIIRRE
LTAHSGRSRLFINDKLSSQETVRDMRSSLIIHTSQHGQQKLLQPSFQAALLDTYMNRPDLLEQRDSLLRSLRSLTEEKEA
LHERSRSLADRRELLEFQQQEIAKVDPQPGEEDALLERKRLLRGQTQSKQLVEDALSCLGGYEGGIIPALGTLESTLRQL
AAALPEYEEDATTVSGFRQTLHDIEGRLRRQPVHDADEEDLEEIEARLYELAQLKRKLKRSLDEIVDLQREIEENLSFLD
SCGLDLKRIARQEQETREKLAALLEKLNPARRKAGEKLAADIVAELKGLGFSDQVQVRFTHTPHKLAENCIEEKAGMLWL
PNPGQPPQPLDKIASGGELSRFLLAVVGLMAREESATLIFDEVDSGVGGLTLNSVAERLRSLASQRQMLLITHWPQLAAK
AQRHFHVRKEVHDDATYTYCTALDAKGISNELSRMAGGGEQGEAFAGNLLTPHLQHR
>Mature_537_residues
MLELLRIRNLALIEDMELEFAPGMNVLTGETGAGKSFILKALNFLTGDRLSADIVRAGADKATVEALFALSDGDLIIRRE
LTAHSGRSRLFINDKLSSQETVRDMRSSLIIHTSQHGQQKLLQPSFQAALLDTYMNRPDLLEQRDSLLRSLRSLTEEKEA
LHERSRSLADRRELLEFQQQEIAKVDPQPGEEDALLERKRLLRGQTQSKQLVEDALSCLGGYEGGIIPALGTLESTLRQL
AAALPEYEEDATTVSGFRQTLHDIEGRLRRQPVHDADEEDLEEIEARLYELAQLKRKLKRSLDEIVDLQREIEENLSFLD
SCGLDLKRIARQEQETREKLAALLEKLNPARRKAGEKLAADIVAELKGLGFSDQVQVRFTHTPHKLAENCIEEKAGMLWL
PNPGQPPQPLDKIASGGELSRFLLAVVGLMAREESATLIFDEVDSGVGGLTLNSVAERLRSLASQRQMLLITHWPQLAAK
AQRHFHVRKEVHDDATYTYCTALDAKGISNELSRMAGGGEQGEAFAGNLLTPHLQHR

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=549, Percent_Identity=31.1475409836066, Blast_Score=211, Evalue=1e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 60028; Mature: 60028

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELLRIRNLALIEDMELEFAPGMNVLTGETGAGKSFILKALNFLTGDRLSADIVRAGAD
CCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCC
KATVEALFALSDGDLIIRRELTAHSGRSRLFINDKLSSQETVRDMRSSLIIHTSQHGQQK
HHHHHHHHHCCCCCEEEEEEHHHCCCCCEEEECCCCCHHHHHHHHHHHHEEECCCCCHHH
LLQPSFQAALLDTYMNRPDLLEQRDSLLRSLRSLTEEKEALHERSRSLADRRELLEFQQQ
HHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAKVDPQPGEEDALLERKRLLRGQTQSKQLVEDALSCLGGYEGGIIPALGTLESTLRQL
HHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
AAALPEYEEDATTVSGFRQTLHDIEGRLRRQPVHDADEEDLEEIEARLYELAQLKRKLKR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLDEIVDLQREIEENLSFLDSCGLDLKRIARQEQETREKLAALLEKLNPARRKAGEKLAA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DIVAELKGLGFSDQVQVRFTHTPHKLAENCIEEKAGMLWLPNPGQPPQPLDKIASGGELS
HHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHCCCCHHH
RFLLAVVGLMAREESATLIFDEVDSGVGGLTLNSVAERLRSLASQRQMLLITHWPQLAAK
HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHH
AQRHFHVRKEVHDDATYTYCTALDAKGISNELSRMAGGGEQGEAFAGNLLTPHLQHR
HHHHHHHHHHHCCCCCEEHEEHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCHHCCC
>Mature Secondary Structure
MLELLRIRNLALIEDMELEFAPGMNVLTGETGAGKSFILKALNFLTGDRLSADIVRAGAD
CCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCC
KATVEALFALSDGDLIIRRELTAHSGRSRLFINDKLSSQETVRDMRSSLIIHTSQHGQQK
HHHHHHHHHCCCCCEEEEEEHHHCCCCCEEEECCCCCHHHHHHHHHHHHEEECCCCCHHH
LLQPSFQAALLDTYMNRPDLLEQRDSLLRSLRSLTEEKEALHERSRSLADRRELLEFQQQ
HHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAKVDPQPGEEDALLERKRLLRGQTQSKQLVEDALSCLGGYEGGIIPALGTLESTLRQL
HHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
AAALPEYEEDATTVSGFRQTLHDIEGRLRRQPVHDADEEDLEEIEARLYELAQLKRKLKR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLDEIVDLQREIEENLSFLDSCGLDLKRIARQEQETREKLAALLEKLNPARRKAGEKLAA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DIVAELKGLGFSDQVQVRFTHTPHKLAENCIEEKAGMLWLPNPGQPPQPLDKIASGGELS
HHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHCCCCHHH
RFLLAVVGLMAREESATLIFDEVDSGVGGLTLNSVAERLRSLASQRQMLLITHWPQLAAK
HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHH
AQRHFHVRKEVHDDATYTYCTALDAKGISNELSRMAGGGEQGEAFAGNLLTPHLQHR
HHHHHHHHHHHCCCCCEEHEEHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]