Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78357535

Identifier: 78357535

GI number: 78357535

Start: 2511559

End: 2513187

Strand: Direct

Name: 78357535

Synonym: Dde_2492

Alternate gene names: NA

Gene position: 2511559-2513187 (Clockwise)

Preceding gene: 78357534

Following gene: 78357544

Centisome position: 67.33

GC content: 59.98

Gene sequence:

>1629_bases
ATGCCCGCCGACATCCGGCGGCGGTTCATGTCAAAGGAAGCGTTTTTCTCCCCCGATTTCCCTGCACCGGACGAGGGTCA
AGGGTTTGCAGTTCGGCCGGAGACCGCAAATCCTGCTCCAACTTCCCGTCTTATTGCCTATCAGCGGAATTGTTCCCGGC
AGCCATTTCGGACGGCGGTTCGGTTCCCGAAAACGGAATCGAACAGTATCGCCTTCCGTTTCGACAAACCATTTGCTTTT
TCCGGCACACCAAGCATGAATGACACCGGTTGCCAAAACGAACAGGGAGCACCAGGCCATGCCATGATCGAATGCCTGAA
ACGAATCATCCGCAAATACCAGAGCCTTGAACCGCCGGACGGACTGCTGCCCCGGCGTGTTGCCATTGGCAGCCTGCCGG
GTAAGGTCTCGGTGGTCACCGGCGTCAGGGGTAGCGGCAAGACCACTTTGCTGCGCCAGCGCATCCGGCAACTAATCGAG
AGCGGTGTTCCCCGTAAGAACATCCTTTATCTCAATTTGACCGACGACCGGCTTTACTGGCTGCGGCACGAAAACCCGGA
CATCATCCTGGAGGCCTATTACGAGCTCCATCCGCAGAAGCGCGGCAGCGAGACGGTTCACTACTTTTTTGACGAGGTGC
AGGCCCTCCAGCACTGGCCACTCTTCATCGACCGTTTGTTGCGCACCGAAAAGTGCGAGATCACCGTGGCCGGTTCCTTG
CTGCCTTCACCGGAGGAGGAAACCGCCTGCCCTCTGACCGGCCGGATCGTCTCCTGGGAGATCTTCCCGCTTTCGTTTCG
GGAGTTCCTCTACGGCAAGGGCATCGAAAGCGACGGCCCCTTATCCACCAAGCAGCGGCTGACCATCCAGAAGGCGTTCG
AGGACTATTGGCAGTTTGGCGGCTTCCCCGGCGCGAACCGAGTCGACCAGCAGCAAAGCATAGAGGCTCATCAGGCCAAC
TGGAACGCCATCCTTGCCAGCATCATCGGCCACCACAACATCTCCCACCCTCGGGCGGTGATCGATCTGGCCCACTGGCT
GATGGACAATACCGGCTTCTTCTATGCCGTCAGCCACCTGACCGACCACCTGAAATCCCTCGGCCACCGGGTGCGCAAAA
GCTCGGTGGTCGACTGGCTCGTCGCGTTCGAGGATGCCGGGCTGCTGTTCAGCGTGAATATTTTTTCCAGCTCCCCAACC
CGGATCAGCGTCAATCCCCGCAAGGTCTACTGTGTTGACCACGCCCTGACGGCCTCGGTCAGCTCCGGCATCTTCACCAA
CCGTGACTGCCTGCTGGAGAACCTGGTGTTCACCGCGCTGCGCCGAGTGACGCCGGAAATCTTCTACCACAAGACCAAGA
CGGGCCGGGAGGTGGACCTTGTCGCGCTGCTGCCATCAGCGCCGGGACAAGAACAAGCCATACTGCTTATCCAGGTCTGC
GCCTCGCTGGCCGATCCCCGCGTCAAGCAGAGCGAGCTCCATTCCCTCTCCGAAGCCATGGTCGAGCTGGCAGTGGCGGA
GGGGACCATCGTCACCTGGCGAACCGATGAAACCATCCCCGTCGGCTTCGGCACCATTCGGGTGGTGCCGATCTGGCAGT
TTCTGCTGGAGATGGAGCCGCGAACCTAA

Upstream 100 bases:

>100_bases
GTAGCCCGCAGTGCAAAAGCATGGAGGGTGCGTCGACCTGGCGCAAAACAGCCTCCACCCTCGACTTGCCCCATAACCTA
TTGATGTGAAATTAGAAATA

Downstream 100 bases:

>100_bases
AATAGCGGCTCGCTTTATTTTAGGTTCGTGCCGCTTCCTAAAACTACGGTCTCCATCGGTTTGATCTCGTACCCCATGGC
CCTATAGCCGCGCTGGCGTT

Product: AAA family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MPADIRRRFMSKEAFFSPDFPAPDEGQGFAVRPETANPAPTSRLIAYQRNCSRQPFRTAVRFPKTESNSIAFRFDKPFAF
SGTPSMNDTGCQNEQGAPGHAMIECLKRIIRKYQSLEPPDGLLPRRVAIGSLPGKVSVVTGVRGSGKTTLLRQRIRQLIE
SGVPRKNILYLNLTDDRLYWLRHENPDIILEAYYELHPQKRGSETVHYFFDEVQALQHWPLFIDRLLRTEKCEITVAGSL
LPSPEEETACPLTGRIVSWEIFPLSFREFLYGKGIESDGPLSTKQRLTIQKAFEDYWQFGGFPGANRVDQQQSIEAHQAN
WNAILASIIGHHNISHPRAVIDLAHWLMDNTGFFYAVSHLTDHLKSLGHRVRKSSVVDWLVAFEDAGLLFSVNIFSSSPT
RISVNPRKVYCVDHALTASVSSGIFTNRDCLLENLVFTALRRVTPEIFYHKTKTGREVDLVALLPSAPGQEQAILLIQVC
ASLADPRVKQSELHSLSEAMVELAVAEGTIVTWRTDETIPVGFGTIRVVPIWQFLLEMEPRT

Sequences:

>Translated_542_residues
MPADIRRRFMSKEAFFSPDFPAPDEGQGFAVRPETANPAPTSRLIAYQRNCSRQPFRTAVRFPKTESNSIAFRFDKPFAF
SGTPSMNDTGCQNEQGAPGHAMIECLKRIIRKYQSLEPPDGLLPRRVAIGSLPGKVSVVTGVRGSGKTTLLRQRIRQLIE
SGVPRKNILYLNLTDDRLYWLRHENPDIILEAYYELHPQKRGSETVHYFFDEVQALQHWPLFIDRLLRTEKCEITVAGSL
LPSPEEETACPLTGRIVSWEIFPLSFREFLYGKGIESDGPLSTKQRLTIQKAFEDYWQFGGFPGANRVDQQQSIEAHQAN
WNAILASIIGHHNISHPRAVIDLAHWLMDNTGFFYAVSHLTDHLKSLGHRVRKSSVVDWLVAFEDAGLLFSVNIFSSSPT
RISVNPRKVYCVDHALTASVSSGIFTNRDCLLENLVFTALRRVTPEIFYHKTKTGREVDLVALLPSAPGQEQAILLIQVC
ASLADPRVKQSELHSLSEAMVELAVAEGTIVTWRTDETIPVGFGTIRVVPIWQFLLEMEPRT
>Mature_541_residues
PADIRRRFMSKEAFFSPDFPAPDEGQGFAVRPETANPAPTSRLIAYQRNCSRQPFRTAVRFPKTESNSIAFRFDKPFAFS
GTPSMNDTGCQNEQGAPGHAMIECLKRIIRKYQSLEPPDGLLPRRVAIGSLPGKVSVVTGVRGSGKTTLLRQRIRQLIES
GVPRKNILYLNLTDDRLYWLRHENPDIILEAYYELHPQKRGSETVHYFFDEVQALQHWPLFIDRLLRTEKCEITVAGSLL
PSPEEETACPLTGRIVSWEIFPLSFREFLYGKGIESDGPLSTKQRLTIQKAFEDYWQFGGFPGANRVDQQQSIEAHQANW
NAILASIIGHHNISHPRAVIDLAHWLMDNTGFFYAVSHLTDHLKSLGHRVRKSSVVDWLVAFEDAGLLFSVNIFSSSPTR
ISVNPRKVYCVDHALTASVSSGIFTNRDCLLENLVFTALRRVTPEIFYHKTKTGREVDLVALLPSAPGQEQAILLIQVCA
SLADPRVKQSELHSLSEAMVELAVAEGTIVTWRTDETIPVGFGTIRVVPIWQFLLEMEPRT

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61126; Mature: 60994

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPADIRRRFMSKEAFFSPDFPAPDEGQGFAVRPETANPAPTSRLIAYQRNCSRQPFRTAV
CCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHH
RFPKTESNSIAFRFDKPFAFSGTPSMNDTGCQNEQGAPGHAMIECLKRIIRKYQSLEPPD
CCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
GLLPRRVAIGSLPGKVSVVTGVRGSGKTTLLRQRIRQLIESGVPRKNILYLNLTDDRLYW
CCCCCHHEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEE
LRHENPDIILEAYYELHPQKRGSETVHYFFDEVQALQHWPLFIDRLLRTEKCEITVAGSL
EECCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
LPSPEEETACPLTGRIVSWEIFPLSFREFLYGKGIESDGPLSTKQRLTIQKAFEDYWQFG
CCCCCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
GFPGANRVDQQQSIEAHQANWNAILASIIGHHNISHPRAVIDLAHWLMDNTGFFYAVSHL
CCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEHHHH
TDHLKSLGHRVRKSSVVDWLVAFEDAGLLFSVNIFSSSPTRISVNPRKVYCVDHALTASV
HHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCCCEEEECCCEEEEECHHHHHHH
SSGIFTNRDCLLENLVFTALRRVTPEIFYHKTKTGREVDLVALLPSAPGQEQAILLIQVC
HCCCCCCHHHHHHHHHHHHHHHHCHHHHEEECCCCCEEEEEEEECCCCCCCHHHHHHHHH
ASLADPRVKQSELHSLSEAMVELAVAEGTIVTWRTDETIPVGFGTIRVVPIWQFLLEMEP
HHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCEEHHHHHHHHHHCCC
RT
CC
>Mature Secondary Structure 
PADIRRRFMSKEAFFSPDFPAPDEGQGFAVRPETANPAPTSRLIAYQRNCSRQPFRTAV
CHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHH
RFPKTESNSIAFRFDKPFAFSGTPSMNDTGCQNEQGAPGHAMIECLKRIIRKYQSLEPPD
CCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
GLLPRRVAIGSLPGKVSVVTGVRGSGKTTLLRQRIRQLIESGVPRKNILYLNLTDDRLYW
CCCCCHHEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEE
LRHENPDIILEAYYELHPQKRGSETVHYFFDEVQALQHWPLFIDRLLRTEKCEITVAGSL
EECCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
LPSPEEETACPLTGRIVSWEIFPLSFREFLYGKGIESDGPLSTKQRLTIQKAFEDYWQFG
CCCCCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
GFPGANRVDQQQSIEAHQANWNAILASIIGHHNISHPRAVIDLAHWLMDNTGFFYAVSHL
CCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEHHHH
TDHLKSLGHRVRKSSVVDWLVAFEDAGLLFSVNIFSSSPTRISVNPRKVYCVDHALTASV
HHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCCCEEEECCCEEEEECHHHHHHH
SSGIFTNRDCLLENLVFTALRRVTPEIFYHKTKTGREVDLVALLPSAPGQEQAILLIQVC
HCCCCCCHHHHHHHHHHHHHHHHCHHHHEEECCCCCEEEEEEEECCCCCCCHHHHHHHHH
ASLADPRVKQSELHSLSEAMVELAVAEGTIVTWRTDETIPVGFGTIRVVPIWQFLLEMEP
HHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCEEHHHHHHHHHHCCC
RT
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]