Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78356610

Identifier: 78356610

GI number: 78356610

Start: 1589054

End: 1590409

Strand: Direct

Name: 78356610

Synonym: Dde_1567

Alternate gene names: NA

Gene position: 1589054-1590409 (Clockwise)

Preceding gene: 78356609

Following gene: 78356611

Centisome position: 42.6

GC content: 54.2

Gene sequence:

>1356_bases
ATGGCTTTGGGAAAACAAGGTGATCGAAACGGAAAAATGTTCATAGCTTGGGACGAGCTTCCGAAGTCTCCGGGGCATGT
ATTCTATGATCGCCTTCAGTCGCTGCTGAATAAAGCTGGATTTGACAGCTTTGTAGAAGGACTTTGCGCTCCGCTATATG
CCTCCCGTAAAGGTCGGCCTTCCATCCCCCCAGGTCGATATTTCCGCATGCATCTGGTTGGTTATTTTGAGGGAATTGAG
TCCGAGCGTGGTATTGAGTGGCGTTGTGCCGACTCACTTTCCCTGCGTGAATTCTTGCTTTTGGACACAGGCCAGTCCGT
GCCGGATCATTCCAGTCTGAGTCGCATTCGCTCCCGTCTTCCATTGGAGTTGCACCAAGAGATATTCACCTGGGTTCTGG
ACGTGATTACCCATGCCGGTTTGGTCCAGGGAGACCGTATCGGCGTGGATGCATCGACCATGGAAGCCAACGCAGCCATG
CGTTCCATCGTCCGCAAGGACACGGGCGAAGGCTACCGCCAGATGCTCTATCGCATGGCCAAGGAAAGCGGCATGAATAC
GCCGACAAATGAAGACTTGTCCCGCATGGACCGTCAGCGCAAAGGCAAGAAGACTTCCAACAAGGATTGGGAATCACCGA
CCGATCCCGAAGCCAAAGTTGCACGGATGAAAGACGGTCGCACCCGCTTGGCCTACAAGCCGGAACACGCTGTGGACCTG
GATACAGGCGCAGTGGTTGGGGTGGACATTCACCCGGCTGATCAGGGCGACACCAAAACCTTGAGCGAAACGCTCAAAAC
CACGAAAAAGAACTTGGAAAAGGTCGGCAAAGCCCCGTCTCTCAACAATCCGACAGAACTCATCGCGGACAAGGGATATC
ACTCTCGCGCCGTGCTCAAAGAGTTGGACGACAGCCTCTGGAAGACGCGTATCGCAGAGCCAAAACGCAAGGGGCTCAAC
TGGTGGAACGGTGATCATGATGCCCGACGAGCCGTGTACAACAACCGGATACGACTAGGTTCCGGCAAGGCCTGCGAGTC
AGCGAAACGCCGAACAGAACTCGTCGAACGAAGCTTCCAGCACACCCTTGATCGGGGTGGCATGCGTAAAACGTGGTTGC
GCGGACGTGAGAACGTCGAAAAACGCTACCTGCTCCACGTCACGGGTTTCAATCTCGGCCTGCTCATGAGAAAAATGATT
GGGTATGGCACCCCGAAAGGGGCAGCCGATGCCTGGAATCTTGTTTTTGTAGGATATCAGACGAAATCAGGCTGGATATT
GCTCGTTTTCGCGGTACATGAGGAGCACCCCAACAATCTCATGCCAGTTGCTGCGGTGAGCAAGTCTTTGGTGTGA

Upstream 100 bases:

>100_bases
ATCTTCAATAAGTAGCACATCAGGTCGTTTATTTTTACCTTCTAGCTATTGAAAACATATTGAAAATAAAGGATAATCCT
CCGAAGCGCAGGAGGGTTTC

Downstream 100 bases:

>100_bases
AAACCGGAAATATCGACTTTTTCAACGGCCTGCTATAGTCCGCAGGAAGCCCGCAGACTCCTTTCGCAGGCAGGTTTTGC
GGACGCCGACGGGGACGGCA

Product: IS5 family transposase

Products: NA

Alternate protein names: IS5 Family Transposase; Transposase For Insertion Sequence Element; Transposase; ISBma2 Transposase

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MALGKQGDRNGKMFIAWDELPKSPGHVFYDRLQSLLNKAGFDSFVEGLCAPLYASRKGRPSIPPGRYFRMHLVGYFEGIE
SERGIEWRCADSLSLREFLLLDTGQSVPDHSSLSRIRSRLPLELHQEIFTWVLDVITHAGLVQGDRIGVDASTMEANAAM
RSIVRKDTGEGYRQMLYRMAKESGMNTPTNEDLSRMDRQRKGKKTSNKDWESPTDPEAKVARMKDGRTRLAYKPEHAVDL
DTGAVVGVDIHPADQGDTKTLSETLKTTKKNLEKVGKAPSLNNPTELIADKGYHSRAVLKELDDSLWKTRIAEPKRKGLN
WWNGDHDARRAVYNNRIRLGSGKACESAKRRTELVERSFQHTLDRGGMRKTWLRGRENVEKRYLLHVTGFNLGLLMRKMI
GYGTPKGAADAWNLVFVGYQTKSGWILLVFAVHEEHPNNLMPVAAVSKSLV

Sequences:

>Translated_451_residues
MALGKQGDRNGKMFIAWDELPKSPGHVFYDRLQSLLNKAGFDSFVEGLCAPLYASRKGRPSIPPGRYFRMHLVGYFEGIE
SERGIEWRCADSLSLREFLLLDTGQSVPDHSSLSRIRSRLPLELHQEIFTWVLDVITHAGLVQGDRIGVDASTMEANAAM
RSIVRKDTGEGYRQMLYRMAKESGMNTPTNEDLSRMDRQRKGKKTSNKDWESPTDPEAKVARMKDGRTRLAYKPEHAVDL
DTGAVVGVDIHPADQGDTKTLSETLKTTKKNLEKVGKAPSLNNPTELIADKGYHSRAVLKELDDSLWKTRIAEPKRKGLN
WWNGDHDARRAVYNNRIRLGSGKACESAKRRTELVERSFQHTLDRGGMRKTWLRGRENVEKRYLLHVTGFNLGLLMRKMI
GYGTPKGAADAWNLVFVGYQTKSGWILLVFAVHEEHPNNLMPVAAVSKSLV
>Mature_450_residues
ALGKQGDRNGKMFIAWDELPKSPGHVFYDRLQSLLNKAGFDSFVEGLCAPLYASRKGRPSIPPGRYFRMHLVGYFEGIES
ERGIEWRCADSLSLREFLLLDTGQSVPDHSSLSRIRSRLPLELHQEIFTWVLDVITHAGLVQGDRIGVDASTMEANAAMR
SIVRKDTGEGYRQMLYRMAKESGMNTPTNEDLSRMDRQRKGKKTSNKDWESPTDPEAKVARMKDGRTRLAYKPEHAVDLD
TGAVVGVDIHPADQGDTKTLSETLKTTKKNLEKVGKAPSLNNPTELIADKGYHSRAVLKELDDSLWKTRIAEPKRKGLNW
WNGDHDARRAVYNNRIRLGSGKACESAKRRTELVERSFQHTLDRGGMRKTWLRGRENVEKRYLLHVTGFNLGLLMRKMIG
YGTPKGAADAWNLVFVGYQTKSGWILLVFAVHEEHPNNLMPVAAVSKSLV

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50904; Mature: 50773

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALGKQGDRNGKMFIAWDELPKSPGHVFYDRLQSLLNKAGFDSFVEGLCAPLYASRKGRP
CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
SIPPGRYFRMHLVGYFEGIESERGIEWRCADSLSLREFLLLDTGQSVPDHSSLSRIRSRL
CCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHEECCCCCCCHHHHHHHHHHC
PLELHQEIFTWVLDVITHAGLVQGDRIGVDASTMEANAAMRSIVRKDTGEGYRQMLYRMA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KESGMNTPTNEDLSRMDRQRKGKKTSNKDWESPTDPEAKVARMKDGRTRLAYKPEHAVDL
HHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEC
DTGAVVGVDIHPADQGDTKTLSETLKTTKKNLEKVGKAPSLNNPTELIADKGYHSRAVLK
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHH
ELDDSLWKTRIAEPKRKGLNWWNGDHDARRAVYNNRIRLGSGKACESAKRRTELVERSFQ
HHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHH
HTLDRGGMRKTWLRGRENVEKRYLLHVTGFNLGLLMRKMIGYGTPKGAADAWNLVFVGYQ
HHHHCCCCHHHHHHCHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEE
TKSGWILLVFAVHEEHPNNLMPVAAVSKSLV
ECCCCEEEEEEEECCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
ALGKQGDRNGKMFIAWDELPKSPGHVFYDRLQSLLNKAGFDSFVEGLCAPLYASRKGRP
CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
SIPPGRYFRMHLVGYFEGIESERGIEWRCADSLSLREFLLLDTGQSVPDHSSLSRIRSRL
CCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHEECCCCCCCHHHHHHHHHHC
PLELHQEIFTWVLDVITHAGLVQGDRIGVDASTMEANAAMRSIVRKDTGEGYRQMLYRMA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KESGMNTPTNEDLSRMDRQRKGKKTSNKDWESPTDPEAKVARMKDGRTRLAYKPEHAVDL
HHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEC
DTGAVVGVDIHPADQGDTKTLSETLKTTKKNLEKVGKAPSLNNPTELIADKGYHSRAVLK
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHH
ELDDSLWKTRIAEPKRKGLNWWNGDHDARRAVYNNRIRLGSGKACESAKRRTELVERSFQ
HHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHH
HTLDRGGMRKTWLRGRENVEKRYLLHVTGFNLGLLMRKMIGYGTPKGAADAWNLVFVGYQ
HHHHCCCCHHHHHHCHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEE
TKSGWILLVFAVHEEHPNNLMPVAAVSKSLV
ECCCCEEEEEEEECCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA