Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78356610
Identifier: 78356610
GI number: 78356610
Start: 1589054
End: 1590409
Strand: Direct
Name: 78356610
Synonym: Dde_1567
Alternate gene names: NA
Gene position: 1589054-1590409 (Clockwise)
Preceding gene: 78356609
Following gene: 78356611
Centisome position: 42.6
GC content: 54.2
Gene sequence:
>1356_bases ATGGCTTTGGGAAAACAAGGTGATCGAAACGGAAAAATGTTCATAGCTTGGGACGAGCTTCCGAAGTCTCCGGGGCATGT ATTCTATGATCGCCTTCAGTCGCTGCTGAATAAAGCTGGATTTGACAGCTTTGTAGAAGGACTTTGCGCTCCGCTATATG CCTCCCGTAAAGGTCGGCCTTCCATCCCCCCAGGTCGATATTTCCGCATGCATCTGGTTGGTTATTTTGAGGGAATTGAG TCCGAGCGTGGTATTGAGTGGCGTTGTGCCGACTCACTTTCCCTGCGTGAATTCTTGCTTTTGGACACAGGCCAGTCCGT GCCGGATCATTCCAGTCTGAGTCGCATTCGCTCCCGTCTTCCATTGGAGTTGCACCAAGAGATATTCACCTGGGTTCTGG ACGTGATTACCCATGCCGGTTTGGTCCAGGGAGACCGTATCGGCGTGGATGCATCGACCATGGAAGCCAACGCAGCCATG CGTTCCATCGTCCGCAAGGACACGGGCGAAGGCTACCGCCAGATGCTCTATCGCATGGCCAAGGAAAGCGGCATGAATAC GCCGACAAATGAAGACTTGTCCCGCATGGACCGTCAGCGCAAAGGCAAGAAGACTTCCAACAAGGATTGGGAATCACCGA CCGATCCCGAAGCCAAAGTTGCACGGATGAAAGACGGTCGCACCCGCTTGGCCTACAAGCCGGAACACGCTGTGGACCTG GATACAGGCGCAGTGGTTGGGGTGGACATTCACCCGGCTGATCAGGGCGACACCAAAACCTTGAGCGAAACGCTCAAAAC CACGAAAAAGAACTTGGAAAAGGTCGGCAAAGCCCCGTCTCTCAACAATCCGACAGAACTCATCGCGGACAAGGGATATC ACTCTCGCGCCGTGCTCAAAGAGTTGGACGACAGCCTCTGGAAGACGCGTATCGCAGAGCCAAAACGCAAGGGGCTCAAC TGGTGGAACGGTGATCATGATGCCCGACGAGCCGTGTACAACAACCGGATACGACTAGGTTCCGGCAAGGCCTGCGAGTC AGCGAAACGCCGAACAGAACTCGTCGAACGAAGCTTCCAGCACACCCTTGATCGGGGTGGCATGCGTAAAACGTGGTTGC GCGGACGTGAGAACGTCGAAAAACGCTACCTGCTCCACGTCACGGGTTTCAATCTCGGCCTGCTCATGAGAAAAATGATT GGGTATGGCACCCCGAAAGGGGCAGCCGATGCCTGGAATCTTGTTTTTGTAGGATATCAGACGAAATCAGGCTGGATATT GCTCGTTTTCGCGGTACATGAGGAGCACCCCAACAATCTCATGCCAGTTGCTGCGGTGAGCAAGTCTTTGGTGTGA
Upstream 100 bases:
>100_bases ATCTTCAATAAGTAGCACATCAGGTCGTTTATTTTTACCTTCTAGCTATTGAAAACATATTGAAAATAAAGGATAATCCT CCGAAGCGCAGGAGGGTTTC
Downstream 100 bases:
>100_bases AAACCGGAAATATCGACTTTTTCAACGGCCTGCTATAGTCCGCAGGAAGCCCGCAGACTCCTTTCGCAGGCAGGTTTTGC GGACGCCGACGGGGACGGCA
Product: IS5 family transposase
Products: NA
Alternate protein names: IS5 Family Transposase; Transposase For Insertion Sequence Element; Transposase; ISBma2 Transposase
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MALGKQGDRNGKMFIAWDELPKSPGHVFYDRLQSLLNKAGFDSFVEGLCAPLYASRKGRPSIPPGRYFRMHLVGYFEGIE SERGIEWRCADSLSLREFLLLDTGQSVPDHSSLSRIRSRLPLELHQEIFTWVLDVITHAGLVQGDRIGVDASTMEANAAM RSIVRKDTGEGYRQMLYRMAKESGMNTPTNEDLSRMDRQRKGKKTSNKDWESPTDPEAKVARMKDGRTRLAYKPEHAVDL DTGAVVGVDIHPADQGDTKTLSETLKTTKKNLEKVGKAPSLNNPTELIADKGYHSRAVLKELDDSLWKTRIAEPKRKGLN WWNGDHDARRAVYNNRIRLGSGKACESAKRRTELVERSFQHTLDRGGMRKTWLRGRENVEKRYLLHVTGFNLGLLMRKMI GYGTPKGAADAWNLVFVGYQTKSGWILLVFAVHEEHPNNLMPVAAVSKSLV
Sequences:
>Translated_451_residues MALGKQGDRNGKMFIAWDELPKSPGHVFYDRLQSLLNKAGFDSFVEGLCAPLYASRKGRPSIPPGRYFRMHLVGYFEGIE SERGIEWRCADSLSLREFLLLDTGQSVPDHSSLSRIRSRLPLELHQEIFTWVLDVITHAGLVQGDRIGVDASTMEANAAM RSIVRKDTGEGYRQMLYRMAKESGMNTPTNEDLSRMDRQRKGKKTSNKDWESPTDPEAKVARMKDGRTRLAYKPEHAVDL DTGAVVGVDIHPADQGDTKTLSETLKTTKKNLEKVGKAPSLNNPTELIADKGYHSRAVLKELDDSLWKTRIAEPKRKGLN WWNGDHDARRAVYNNRIRLGSGKACESAKRRTELVERSFQHTLDRGGMRKTWLRGRENVEKRYLLHVTGFNLGLLMRKMI GYGTPKGAADAWNLVFVGYQTKSGWILLVFAVHEEHPNNLMPVAAVSKSLV >Mature_450_residues ALGKQGDRNGKMFIAWDELPKSPGHVFYDRLQSLLNKAGFDSFVEGLCAPLYASRKGRPSIPPGRYFRMHLVGYFEGIES ERGIEWRCADSLSLREFLLLDTGQSVPDHSSLSRIRSRLPLELHQEIFTWVLDVITHAGLVQGDRIGVDASTMEANAAMR SIVRKDTGEGYRQMLYRMAKESGMNTPTNEDLSRMDRQRKGKKTSNKDWESPTDPEAKVARMKDGRTRLAYKPEHAVDLD TGAVVGVDIHPADQGDTKTLSETLKTTKKNLEKVGKAPSLNNPTELIADKGYHSRAVLKELDDSLWKTRIAEPKRKGLNW WNGDHDARRAVYNNRIRLGSGKACESAKRRTELVERSFQHTLDRGGMRKTWLRGRENVEKRYLLHVTGFNLGLLMRKMIG YGTPKGAADAWNLVFVGYQTKSGWILLVFAVHEEHPNNLMPVAAVSKSLV
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50904; Mature: 50773
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGKQGDRNGKMFIAWDELPKSPGHVFYDRLQSLLNKAGFDSFVEGLCAPLYASRKGRP CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC SIPPGRYFRMHLVGYFEGIESERGIEWRCADSLSLREFLLLDTGQSVPDHSSLSRIRSRL CCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHEECCCCCCCHHHHHHHHHHC PLELHQEIFTWVLDVITHAGLVQGDRIGVDASTMEANAAMRSIVRKDTGEGYRQMLYRMA CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH KESGMNTPTNEDLSRMDRQRKGKKTSNKDWESPTDPEAKVARMKDGRTRLAYKPEHAVDL HHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEC DTGAVVGVDIHPADQGDTKTLSETLKTTKKNLEKVGKAPSLNNPTELIADKGYHSRAVLK CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHH ELDDSLWKTRIAEPKRKGLNWWNGDHDARRAVYNNRIRLGSGKACESAKRRTELVERSFQ HHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHH HTLDRGGMRKTWLRGRENVEKRYLLHVTGFNLGLLMRKMIGYGTPKGAADAWNLVFVGYQ HHHHCCCCHHHHHHCHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEE TKSGWILLVFAVHEEHPNNLMPVAAVSKSLV ECCCCEEEEEEEECCCCCCCCHHHHHHHCCC >Mature Secondary Structure ALGKQGDRNGKMFIAWDELPKSPGHVFYDRLQSLLNKAGFDSFVEGLCAPLYASRKGRP CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC SIPPGRYFRMHLVGYFEGIESERGIEWRCADSLSLREFLLLDTGQSVPDHSSLSRIRSRL CCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHEECCCCCCCHHHHHHHHHHC PLELHQEIFTWVLDVITHAGLVQGDRIGVDASTMEANAAMRSIVRKDTGEGYRQMLYRMA CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH KESGMNTPTNEDLSRMDRQRKGKKTSNKDWESPTDPEAKVARMKDGRTRLAYKPEHAVDL HHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEC DTGAVVGVDIHPADQGDTKTLSETLKTTKKNLEKVGKAPSLNNPTELIADKGYHSRAVLK CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHH ELDDSLWKTRIAEPKRKGLNWWNGDHDARRAVYNNRIRLGSGKACESAKRRTELVERSFQ HHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHH HTLDRGGMRKTWLRGRENVEKRYLLHVTGFNLGLLMRKMIGYGTPKGAADAWNLVFVGYQ HHHHCCCCHHHHHHCHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEE TKSGWILLVFAVHEEHPNNLMPVAAVSKSLV ECCCCEEEEEEEECCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA