| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355892
Identifier: 78355892
GI number: 78355892
Start: 875419
End: 877032
Strand: Direct
Name: 78355892
Synonym: Dde_0845
Alternate gene names: NA
Gene position: 875419-877032 (Clockwise)
Preceding gene: 78355891
Following gene: 78355893
Centisome position: 23.47
GC content: 58.36
Gene sequence:
>1614_bases ATGCGTCGTGACATGCTGCTTCCGCTCATGCTCGCGGGCTATCTTTTTCTGCTTATATTCCGGCCGTATGAATACTGGCC GGTGCTGGGAGACTTCCGGCTTGAGCGCGTCTACATGCTCACATTCATGGCTGCGGCGTTTTTTGTGCCGGGCAAACGGC TGCCCTCCAGTCCGGTACATCTGGCCGTGGGGGCGCTGGCGCTGACTTTGCTCGTTTCCGCTCTGGGGGCGTACAACGGA CAGGCTGCGTGGCGGACGGTGGAAGACTATCTGAAGTATATCGTTTTTTATGTCATGCTTATTCTGTCTGTCCGTAACGA GCGCGATTTCAGATTTGTCCTGCTGGCTTTTGTGGCGGTCATGGGGCTGTATGTGGGAAAATCCATGTGGGAATTTTTTG TCCACGGCCGCCATGTATACCGCATGGGTATCCGGCGGATGGTGGGGATAGATGTGACCTATGGTGACCCCAACTCGTTT GCGGCAAGTATCGCGTACTCGCTGCCTTTGTTCTGGGCCCTTGTGCGCTGCCGGTTTCCTTCCGTGTGGGTACGCCGCGG TCTCTGGCTGTACGGGGGCATGGCGCTGGTGGGCATAATTTTTACGGGGTCGCGCAGCGGCATGGTGACCGCCATATTTT TTGCGCTGCTGGTGCTCATGTCATCATCGCGCAAACTTGTCGGAATTTTTGTCGTTTTTCTGCTGCTTGTCTTTGCATGG GATTTCATGCCCGATGACCTGCAGCAGCGCTTTCTTTCCACTTTTGGCTACGGCCATACGGGTAAAGGCGCCATAGAATC TGCCGAAGGCCGGCTGAAGGGATTCCAGCAGGGCATGGAGGTATTCACCCGGTATCCGCTGCTGGGCATAGGTCCCGGCA ACTTCGGGTATAGCTGGGAGGGGCTCTCATCCGGCCCCAAGTCGCACAACGTGTACGGAGAAGTGGCCGGAGAACTGGGG CTGGCAGGTATTCTGTCATTCGGCGGTCTTGTGGTGGTTCTGTTCAGGCAGAACATCCTGCTGCGCAGGCGATGCCGCCT GCTGCTGAGCCACCCTGCCTTGCTGCGTTCTGCCAGACGCAATGTGCATGACAGAAGCACTCCGGTGCGCAGCCCGGCTG CCGCGCGCGATGGCGGTGGCAGCAACGGGGCGCGGTACAGCATGAAAAACCATGTGCCTCCGGCGGAAGACAATGTCAGC ACACGGCACGGCTATGCACTGAAAGCGACACAACAGGAGACCGGAGAAGCCCCGTACCGCATGAAACCGTTGCCTGATAC CCCTGAAACAGCCGGTTCCGCGCCGGCGGACAGAACCGTTCCGCAGACTTTGGCCGCAGACAGGCACACACCGCAACCGC GCCCTGTGCAGGCGCAACGCAGAAAAGCACGGGCCGGTGCAGGTGCCGGAGGGCTTGCCGGCGGTGACCTGCCGGGCAGT CTCATGTTTTATTCTCTGGTGGCGCAGGCTGTAATGCAGACACTGCTCCTGATGCTGTTCAAAGGATGGGGCGACCATAA CCTTTACCGCTACACTTGGCTCTGGCTCGGAGGAGTCACCGTTTTGGGAAATTTTTTATTTGCTCAGGAGGTACGCAGGC ATGGACGGTCGTAA
Upstream 100 bases:
>100_bases AACTACGGCATGCGGGCCGATGCCGTACGCTATTACGCACTGGCCGCGTTGCCGGAAGGGCTGTTGCGGGGGCTTTGCGC TGTTACCGGAAGAGGACCGT
Downstream 100 bases:
>100_bases ACAACTGCTCTGCGTGGTGCGCTGGCCGGTGGGGGGCATCCGCTCGTATATGCGGTATGTGTACGGTTGTCTTTCCGATG CGTGGCAGGTCACCGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MRRDMLLPLMLAGYLFLLIFRPYEYWPVLGDFRLERVYMLTFMAAAFFVPGKRLPSSPVHLAVGALALTLLVSALGAYNG QAAWRTVEDYLKYIVFYVMLILSVRNERDFRFVLLAFVAVMGLYVGKSMWEFFVHGRHVYRMGIRRMVGIDVTYGDPNSF AASIAYSLPLFWALVRCRFPSVWVRRGLWLYGGMALVGIIFTGSRSGMVTAIFFALLVLMSSSRKLVGIFVVFLLLVFAW DFMPDDLQQRFLSTFGYGHTGKGAIESAEGRLKGFQQGMEVFTRYPLLGIGPGNFGYSWEGLSSGPKSHNVYGEVAGELG LAGILSFGGLVVVLFRQNILLRRRCRLLLSHPALLRSARRNVHDRSTPVRSPAAARDGGGSNGARYSMKNHVPPAEDNVS TRHGYALKATQQETGEAPYRMKPLPDTPETAGSAPADRTVPQTLAADRHTPQPRPVQAQRRKARAGAGAGGLAGGDLPGS LMFYSLVAQAVMQTLLLMLFKGWGDHNLYRYTWLWLGGVTVLGNFLFAQEVRRHGRS
Sequences:
>Translated_537_residues MRRDMLLPLMLAGYLFLLIFRPYEYWPVLGDFRLERVYMLTFMAAAFFVPGKRLPSSPVHLAVGALALTLLVSALGAYNG QAAWRTVEDYLKYIVFYVMLILSVRNERDFRFVLLAFVAVMGLYVGKSMWEFFVHGRHVYRMGIRRMVGIDVTYGDPNSF AASIAYSLPLFWALVRCRFPSVWVRRGLWLYGGMALVGIIFTGSRSGMVTAIFFALLVLMSSSRKLVGIFVVFLLLVFAW DFMPDDLQQRFLSTFGYGHTGKGAIESAEGRLKGFQQGMEVFTRYPLLGIGPGNFGYSWEGLSSGPKSHNVYGEVAGELG LAGILSFGGLVVVLFRQNILLRRRCRLLLSHPALLRSARRNVHDRSTPVRSPAAARDGGGSNGARYSMKNHVPPAEDNVS TRHGYALKATQQETGEAPYRMKPLPDTPETAGSAPADRTVPQTLAADRHTPQPRPVQAQRRKARAGAGAGGLAGGDLPGS LMFYSLVAQAVMQTLLLMLFKGWGDHNLYRYTWLWLGGVTVLGNFLFAQEVRRHGRS >Mature_537_residues MRRDMLLPLMLAGYLFLLIFRPYEYWPVLGDFRLERVYMLTFMAAAFFVPGKRLPSSPVHLAVGALALTLLVSALGAYNG QAAWRTVEDYLKYIVFYVMLILSVRNERDFRFVLLAFVAVMGLYVGKSMWEFFVHGRHVYRMGIRRMVGIDVTYGDPNSF AASIAYSLPLFWALVRCRFPSVWVRRGLWLYGGMALVGIIFTGSRSGMVTAIFFALLVLMSSSRKLVGIFVVFLLLVFAW DFMPDDLQQRFLSTFGYGHTGKGAIESAEGRLKGFQQGMEVFTRYPLLGIGPGNFGYSWEGLSSGPKSHNVYGEVAGELG LAGILSFGGLVVVLFRQNILLRRRCRLLLSHPALLRSARRNVHDRSTPVRSPAAARDGGGSNGARYSMKNHVPPAEDNVS TRHGYALKATQQETGEAPYRMKPLPDTPETAGSAPADRTVPQTLAADRHTPQPRPVQAQRRKARAGAGAGGLAGGDLPGS LMFYSLVAQAVMQTLLLMLFKGWGDHNLYRYTWLWLGGVTVLGNFLFAQEVRRHGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59733; Mature: 59733
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDMLLPLMLAGYLFLLIFRPYEYWPVLGDFRLERVYMLTFMAAAFFVPGKRLPSSPVH CCCCHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH LAVGALALTLLVSALGAYNGQAAWRTVEDYLKYIVFYVMLILSVRNERDFRFVLLAFVAV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MGLYVGKSMWEFFVHGRHVYRMGIRRMVGIDVTYGDPNSFAASIAYSLPLFWALVRCRFP HHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC SVWVRRGLWLYGGMALVGIIFTGSRSGMVTAIFFALLVLMSSSRKLVGIFVVFLLLVFAW HHHHHCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH DFMPDDLQQRFLSTFGYGHTGKGAIESAEGRLKGFQQGMEVFTRYPLLGIGPGNFGYSWE HCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC GLSSGPKSHNVYGEVAGELGLAGILSFGGLVVVLFRQNILLRRRCRLLLSHPALLRSARR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH NVHDRSTPVRSPAAARDGGGSNGARYSMKNHVPPAEDNVSTRHGYALKATQQETGEAPYR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHCCCCCCE MKPLPDTPETAGSAPADRTVPQTLAADRHTPQPRPVQAQRRKARAGAGAGGLAGGDLPGS ECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHH LMFYSLVAQAVMQTLLLMLFKGWGDHNLYRYTWLWLGGVTVLGNFLFAQEVRRHGRS HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRRDMLLPLMLAGYLFLLIFRPYEYWPVLGDFRLERVYMLTFMAAAFFVPGKRLPSSPVH CCCCHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH LAVGALALTLLVSALGAYNGQAAWRTVEDYLKYIVFYVMLILSVRNERDFRFVLLAFVAV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MGLYVGKSMWEFFVHGRHVYRMGIRRMVGIDVTYGDPNSFAASIAYSLPLFWALVRCRFP HHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC SVWVRRGLWLYGGMALVGIIFTGSRSGMVTAIFFALLVLMSSSRKLVGIFVVFLLLVFAW HHHHHCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH DFMPDDLQQRFLSTFGYGHTGKGAIESAEGRLKGFQQGMEVFTRYPLLGIGPGNFGYSWE HCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC GLSSGPKSHNVYGEVAGELGLAGILSFGGLVVVLFRQNILLRRRCRLLLSHPALLRSARR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH NVHDRSTPVRSPAAARDGGGSNGARYSMKNHVPPAEDNVSTRHGYALKATQQETGEAPYR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHCCCCCCE MKPLPDTPETAGSAPADRTVPQTLAADRHTPQPRPVQAQRRKARAGAGAGGLAGGDLPGS ECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHH LMFYSLVAQAVMQTLLLMLFKGWGDHNLYRYTWLWLGGVTVLGNFLFAQEVRRHGRS HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA