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The map label for this gene is yibD [C]

Identifier: 78355891

GI number: 78355891

Start: 874491

End: 875429

Strand: Direct

Name: yibD [C]

Synonym: Dde_0844

Alternate gene names: 78355891

Gene position: 874491-875429 (Clockwise)

Preceding gene: 78355890

Following gene: 78355892

Centisome position: 23.44

GC content: 57.72

Gene sequence:

>939_bases
ATGACGACAACACCCCGGGTGAGTGTGGTTATTCCGACGTACAATTACGGCCATCTGCTGGAGCAGTGCCTTGAGTCGGT
ATTTGCACAGACGTACAAGGATTACGAAGTGATTCTTGTGGATGACGGTTCCACCGATGACACGCCCGGCATCGCTGCGC
GCTATGAAGGGCGTATCCGCTATTTCCGCAAGGAAAACGGCGGTCCCTCAAGCGCCAGAAACGAGGGCATACGGCAGGCC
CGCGGCCCGCTGATCGCCTTTCTTGATTCAGACGACCTGTGGCTGCCGCATAAGCTGGCGGTGCAGACTGCGTTTGCGGA
TGCCCATCCCGAATACGGTCTGGTGTACTGCGATATGCAGCATGTAGAGCATGGCCGCGTCATACACCATTCATACCTGC
ACGAGCGGGGGTATACCTGCACCGGCAGCGGCTGGAAATATGTCGATCTGCTGCGCGAGGGGTTTGTCTTCACGCCCACG
GTGCTGGTGCGCAAAGAATGTTTTTCCGCAGCCGGCATGCATGACGAGGGGTTGCGGACCTGTCAGGATCTGGACATGTG
GCTGCGGATAGCAAAGCTGTATCCTTTCGGTTTCATAGACGAGCCTCTTGTTGTCAGACAATACCACGGTGACAACAGCA
CAACCAACGCCGAACGGTATCATGCCAACCATATCCGCGTGTTTCTGCGCGAACTGGAATCAACCGCGGATGAAACCGCA
AAGCAGGTGCTGCGGGGGCGCCTGTCAGAACAGTACTTCGCTCTGGGGTATCATTATTTTTCCACGGGCAGCAGGCGTCA
GGCACGCCGCTGTTTCCGCAGTGTGCTGAACTACGGCATGCGGGCCGATGCCGTACGCTATTACGCACTGGCCGCGTTGC
CGGAAGGGCTGTTGCGGGGGCTTTGCGCTGTTACCGGAAGAGGACCGTATGCGTCGTGA

Upstream 100 bases:

>100_bases
CGGCAGGATGTTCCGTACATGCCGCAGCCGGCGCGTTGCCCGCCGGCAAAAGCGGGACACACAGCAGGGTATGAAGCCGG
TAAGCGGCTGGGAGTGATAT

Downstream 100 bases:

>100_bases
CATGCTGCTTCCGCTCATGCTCGCGGGCTATCTTTTTCTGCTTATATTCCGGCCGTATGAATACTGGCCGGTGCTGGGAG
ACTTCCGGCTTGAGCGCGTC

Product: cell wall biosynthesis glycosyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTTTPRVSVVIPTYNYGHLLEQCLESVFAQTYKDYEVILVDDGSTDDTPGIAARYEGRIRYFRKENGGPSSARNEGIRQA
RGPLIAFLDSDDLWLPHKLAVQTAFADAHPEYGLVYCDMQHVEHGRVIHHSYLHERGYTCTGSGWKYVDLLREGFVFTPT
VLVRKECFSAAGMHDEGLRTCQDLDMWLRIAKLYPFGFIDEPLVVRQYHGDNSTTNAERYHANHIRVFLRELESTADETA
KQVLRGRLSEQYFALGYHYFSTGSRRQARRCFRSVLNYGMRADAVRYYALAALPEGLLRGLCAVTGRGPYAS

Sequences:

>Translated_312_residues
MTTTPRVSVVIPTYNYGHLLEQCLESVFAQTYKDYEVILVDDGSTDDTPGIAARYEGRIRYFRKENGGPSSARNEGIRQA
RGPLIAFLDSDDLWLPHKLAVQTAFADAHPEYGLVYCDMQHVEHGRVIHHSYLHERGYTCTGSGWKYVDLLREGFVFTPT
VLVRKECFSAAGMHDEGLRTCQDLDMWLRIAKLYPFGFIDEPLVVRQYHGDNSTTNAERYHANHIRVFLRELESTADETA
KQVLRGRLSEQYFALGYHYFSTGSRRQARRCFRSVLNYGMRADAVRYYALAALPEGLLRGLCAVTGRGPYAS
>Mature_311_residues
TTTPRVSVVIPTYNYGHLLEQCLESVFAQTYKDYEVILVDDGSTDDTPGIAARYEGRIRYFRKENGGPSSARNEGIRQAR
GPLIAFLDSDDLWLPHKLAVQTAFADAHPEYGLVYCDMQHVEHGRVIHHSYLHERGYTCTGSGWKYVDLLREGFVFTPTV
LVRKECFSAAGMHDEGLRTCQDLDMWLRIAKLYPFGFIDEPLVVRQYHGDNSTTNAERYHANHIRVFLRELESTADETAK
QVLRGRLSEQYFALGYHYFSTGSRRQARRCFRSVLNYGMRADAVRYYALAALPEGLLRGLCAVTGRGPYAS

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=95, Percent_Identity=42.1052631578947, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1788372, Length=294, Percent_Identity=23.469387755102, Blast_Score=81, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35529; Mature: 35397

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTPRVSVVIPTYNYGHLLEQCLESVFAQTYKDYEVILVDDGSTDDTPGIAARYEGRIR
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCEE
YFRKENGGPSSARNEGIRQARGPLIAFLDSDDLWLPHKLAVQTAFADAHPEYGLVYCDMQ
EEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHH
HVEHGRVIHHSYLHERGYTCTGSGWKYVDLLREGFVFTPTVLVRKECFSAAGMHDEGLRT
HCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHH
CQDLDMWLRIAKLYPFGFIDEPLVVRQYHGDNSTTNAERYHANHIRVFLRELESTADETA
HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KQVLRGRLSEQYFALGYHYFSTGSRRQARRCFRSVLNYGMRADAVRYYALAALPEGLLRG
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LCAVTGRGPYAS
HHHHCCCCCCCC
>Mature Secondary Structure 
TTTPRVSVVIPTYNYGHLLEQCLESVFAQTYKDYEVILVDDGSTDDTPGIAARYEGRIR
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCEE
YFRKENGGPSSARNEGIRQARGPLIAFLDSDDLWLPHKLAVQTAFADAHPEYGLVYCDMQ
EEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHH
HVEHGRVIHHSYLHERGYTCTGSGWKYVDLLREGFVFTPTVLVRKECFSAAGMHDEGLRT
HCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHH
CQDLDMWLRIAKLYPFGFIDEPLVVRQYHGDNSTTNAERYHANHIRVFLRELESTADETA
HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KQVLRGRLSEQYFALGYHYFSTGSRRQARRCFRSVLNYGMRADAVRYYALAALPEGLLRG
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LCAVTGRGPYAS
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA