| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78355889
Identifier: 78355889
GI number: 78355889
Start: 871749
End: 873422
Strand: Direct
Name: 78355889
Synonym: Dde_0842
Alternate gene names: NA
Gene position: 871749-873422 (Clockwise)
Preceding gene: 78355888
Following gene: 78355890
Centisome position: 23.37
GC content: 62.31
Gene sequence:
>1674_bases ATGCTTGACAGACGGCAGACACAAGCGGCGCTGCAGCAATGCCTGCGACAGCCCGTGTTTATACTGGCGCGTGACGGTGC CCGCGGCCTGCTCGGTCTGCCCGCATCTGTGCGCCGGAGTCTGTGCAGGCTTGCTGACGTCCCGTCATCGCCGCAGCCCG CTGATTCCGCTCAGCCCGCTTTGCTGTCCGCAGGGCCTGCGCACCACGAACAGGGCTACAGACAGCCCGATGGCGGGGGA ATTTATGCAGGGTGGCACTGGGACGGTGCAACCCTGCAGCTGTTCACCGACCGCTACGGCATACATCCTCTTTACTATTT CTGGACGGACGGTGTGCTGGGTGTCTCCCGCTCGCTGCCTGCCCTGCTTGCCGCCGGAGCACCGGCAGACCTTGATATGA AAGGACTGTCCGTTTTTCTGCGTGTCGGGTATTTTGTGGGCGAACGTACTGCCTTTCGTCACATACGGGTGCTGCCGGAG GGGGGCTCGCTGGTCTGGAAGCCTCTTTTTTCCGCAGACAGCGCTCCTCAGGTTCGCAGCAATCCGGTCTGCGTGGCGCC ATGCCACGAGGGCCCTGTGACCGGAGCGGCAAAAAAACGGTATATGGACGGGTACATCGATCTGTTCCGTCAGGCCGTTT CACGCTGTCTGAGTGTGACGGAAGGACCCGTGGGGCTGCCGTTGAGCGGCGGCAGAGATTCGCGGCATATCCTGCTGGAA CTGCACAGGCAGAATCGTCTTCCGCAGCTGGCGGTGACTGCGCGTCATTTTCCGCCCCGGGCCGACGATGATGCCGATAT AGCAGCAGAACTGGCCCGCCGCACCGGCTGCAGGCATGAAATTATCGGAGCTGCTCCTTCGCGGCTTACCGCCGAATGGT GCTGCCATCTGGAAACGGACTTCTGTGCCGACGAGCACAGCTGGGCCCGCGGGGCGGGACTCCGCCTGAAAACGCTTGGC TGCACGGTGTTTGACGGTCTGGGGGGAGATAATCTTTCCGAATCCGGTCTTGTGACAGAAGAGCGCTGCCGAATGCTGGA ACGCGGAGAATATGCGGAGTTTGCACGGGGGCTGACGGCATCGCCCGCGGTGTTCAGCGAGACGGCCATGCGTCTTGTAC TGCGGCCGGAACTGTATGCGGCCATGCCGCACGAGATGGCACTGGCAGAGCTGGAAGAGGCTTTGCGGCGCTGTTCCGGT GACCCGCGTCCCGCCCGCAGTTTTTTTTTCACGGCCAGACTGCGCCGCGAAGTCGCGCTGCTGACCTTCGGTGTTTTCGG CGGGGGGATTGCAGTGGCTCCGTTTCTTGACGCTTCCCTGCACGATTACCTGTGTTCTCTGCCGCACGAGCTGCTGGTGC CGCGCGGGTTCCATTCCATGACCATTACCGCCGCATATCCGGAGTTCGCTGATATCCCCTTTGAAAAGAAGGGGACTGTG CAGCGCGATGATGCCGCACACAGTCTGCGGTTGTGCCGCGAACTGGCCATGCTGGGGCTGCGTCGCAGGTCCCGCCTGCT GAACAACGCCGTATTGTGGCCGCGTCTGCTGCGGGGAGCGCTGGACAGCCGCTACGGCGCCTCCACCCGCTGGTTCACGC TTACAGCGGCTTATCTGTACCATCTTGAAGAAATGGCGGAAGCATGCGGTGCAAAGCGGGAGGCTGTGTCATGA
Upstream 100 bases:
>100_bases TGTCACTTTTTCTTTGTGTCACCGGTGCGCTGTACTTCCGCAGCAAAGAAAAAATATTCGCTGATGTGGCATAGGCTGCG GCGCGTAAGGCAGGAATACC
Downstream 100 bases:
>100_bases CCGGAGGTTCTGCGCAAAAATCATCAACACCCGACAGGAGCGTCATGTCTGACCGGCCTGCCGTAAGTGTCATCATGCCT GTGTACAAGACCGAGGCGTA
Product: hypothetical protein
Products: AMP; diphosphate; L-asparagine; L-glutamate
Alternate protein names: None
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MLDRRQTQAALQQCLRQPVFILARDGARGLLGLPASVRRSLCRLADVPSSPQPADSAQPALLSAGPAHHEQGYRQPDGGG IYAGWHWDGATLQLFTDRYGIHPLYYFWTDGVLGVSRSLPALLAAGAPADLDMKGLSVFLRVGYFVGERTAFRHIRVLPE GGSLVWKPLFSADSAPQVRSNPVCVAPCHEGPVTGAAKKRYMDGYIDLFRQAVSRCLSVTEGPVGLPLSGGRDSRHILLE LHRQNRLPQLAVTARHFPPRADDDADIAAELARRTGCRHEIIGAAPSRLTAEWCCHLETDFCADEHSWARGAGLRLKTLG CTVFDGLGGDNLSESGLVTEERCRMLERGEYAEFARGLTASPAVFSETAMRLVLRPELYAAMPHEMALAELEEALRRCSG DPRPARSFFFTARLRREVALLTFGVFGGGIAVAPFLDASLHDYLCSLPHELLVPRGFHSMTITAAYPEFADIPFEKKGTV QRDDAAHSLRLCRELAMLGLRRRSRLLNNAVLWPRLLRGALDSRYGASTRWFTLTAAYLYHLEEMAEACGAKREAVS
Sequences:
>Translated_557_residues MLDRRQTQAALQQCLRQPVFILARDGARGLLGLPASVRRSLCRLADVPSSPQPADSAQPALLSAGPAHHEQGYRQPDGGG IYAGWHWDGATLQLFTDRYGIHPLYYFWTDGVLGVSRSLPALLAAGAPADLDMKGLSVFLRVGYFVGERTAFRHIRVLPE GGSLVWKPLFSADSAPQVRSNPVCVAPCHEGPVTGAAKKRYMDGYIDLFRQAVSRCLSVTEGPVGLPLSGGRDSRHILLE LHRQNRLPQLAVTARHFPPRADDDADIAAELARRTGCRHEIIGAAPSRLTAEWCCHLETDFCADEHSWARGAGLRLKTLG CTVFDGLGGDNLSESGLVTEERCRMLERGEYAEFARGLTASPAVFSETAMRLVLRPELYAAMPHEMALAELEEALRRCSG DPRPARSFFFTARLRREVALLTFGVFGGGIAVAPFLDASLHDYLCSLPHELLVPRGFHSMTITAAYPEFADIPFEKKGTV QRDDAAHSLRLCRELAMLGLRRRSRLLNNAVLWPRLLRGALDSRYGASTRWFTLTAAYLYHLEEMAEACGAKREAVS >Mature_557_residues MLDRRQTQAALQQCLRQPVFILARDGARGLLGLPASVRRSLCRLADVPSSPQPADSAQPALLSAGPAHHEQGYRQPDGGG IYAGWHWDGATLQLFTDRYGIHPLYYFWTDGVLGVSRSLPALLAAGAPADLDMKGLSVFLRVGYFVGERTAFRHIRVLPE GGSLVWKPLFSADSAPQVRSNPVCVAPCHEGPVTGAAKKRYMDGYIDLFRQAVSRCLSVTEGPVGLPLSGGRDSRHILLE LHRQNRLPQLAVTARHFPPRADDDADIAAELARRTGCRHEIIGAAPSRLTAEWCCHLETDFCADEHSWARGAGLRLKTLG CTVFDGLGGDNLSESGLVTEERCRMLERGEYAEFARGLTASPAVFSETAMRLVLRPELYAAMPHEMALAELEEALRRCSG DPRPARSFFFTARLRREVALLTFGVFGGGIAVAPFLDASLHDYLCSLPHELLVPRGFHSMTITAAYPEFADIPFEKKGTV QRDDAAHSLRLCRELAMLGLRRRSRLLNNAVLWPRLLRGALDSRYGASTRWFTLTAAYLYHLEEMAEACGAKREAVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.3.5.4
Molecular weight: Translated: 61297; Mature: 61297
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDRRQTQAALQQCLRQPVFILARDGARGLLGLPASVRRSLCRLADVPSSPQPADSAQPA CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC LLSAGPAHHEQGYRQPDGGGIYAGWHWDGATLQLFTDRYGIHPLYYFWTDGVLGVSRSLP HHCCCCCHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHH ALLAAGAPADLDMKGLSVFLRVGYFVGERTAFRHIRVLPEGGSLVWKPLFSADSAPQVRS HHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEEEEEECCCCEEEEECCCCCCCCCCCC NPVCVAPCHEGPVTGAAKKRYMDGYIDLFRQAVSRCLSVTEGPVGLPLSGGRDSRHILLE CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEE LHRQNRLPQLAVTARHFPPRADDDADIAAELARRTGCRHEIIGAAPSRLTAEWCCHLETD EHHHCCCCEEEEHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCCCC FCADEHSWARGAGLRLKTLGCTVFDGLGGDNLSESGLVTEERCRMLERGEYAEFARGLTA CCCCCCCHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCC SPAVFSETAMRLVLRPELYAAMPHEMALAELEEALRRCSGDPRPARSFFFTARLRREVAL CCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LTFGVFGGGIAVAPFLDASLHDYLCSLPHELLVPRGFHSMTITAAYPEFADIPFEKKGTV HHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCHHCCCCCCCCCC QRDDAAHSLRLCRELAMLGLRRRSRLLNNAVLWPRLLRGALDSRYGASTRWFTLTAAYLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH HLEEMAEACGAKREAVS HHHHHHHHCCCCHHCCC >Mature Secondary Structure MLDRRQTQAALQQCLRQPVFILARDGARGLLGLPASVRRSLCRLADVPSSPQPADSAQPA CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC LLSAGPAHHEQGYRQPDGGGIYAGWHWDGATLQLFTDRYGIHPLYYFWTDGVLGVSRSLP HHCCCCCHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHH ALLAAGAPADLDMKGLSVFLRVGYFVGERTAFRHIRVLPEGGSLVWKPLFSADSAPQVRS HHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEEEEEECCCCEEEEECCCCCCCCCCCC NPVCVAPCHEGPVTGAAKKRYMDGYIDLFRQAVSRCLSVTEGPVGLPLSGGRDSRHILLE CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEE LHRQNRLPQLAVTARHFPPRADDDADIAAELARRTGCRHEIIGAAPSRLTAEWCCHLETD EHHHCCCCEEEEHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCCCC FCADEHSWARGAGLRLKTLGCTVFDGLGGDNLSESGLVTEERCRMLERGEYAEFARGLTA CCCCCCCHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCC SPAVFSETAMRLVLRPELYAAMPHEMALAELEEALRRCSGDPRPARSFFFTARLRREVAL CCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LTFGVFGGGIAVAPFLDASLHDYLCSLPHELLVPRGFHSMTITAAYPEFADIPFEKKGTV HHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCHHCCCCCCCCCC QRDDAAHSLRLCRELAMLGLRRRSRLLNNAVLWPRLLRGALDSRYGASTRWFTLTAAYLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH HLEEMAEACGAKREAVS HHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-aspartate; L-glutamine
Specific reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA