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The map label for this gene is ynjB [H]

Identifier: 78355806

GI number: 78355806

Start: 785684

End: 786973

Strand: Direct

Name: ynjB [H]

Synonym: Dde_0759

Alternate gene names: 78355806

Gene position: 785684-786973 (Clockwise)

Preceding gene: 78355805

Following gene: 78355807

Centisome position: 21.06

GC content: 58.37

Gene sequence:

>1290_bases
ATGCTTTTTACCCTGTGCCGTCCGGTGTGCCGCCCGGCGTGCCGTGTGCATCTGCCCGCCCGCGCTGTTGCAGTGCTGCT
TTTTATCCTGTTTGCCGTGCCGGTGCTGACCGGCTGCTCCGATACTCCCGAAAAAACACAGCCCGCAGCCGAAACGGAAA
GTTTTGACACGGTGGTGCAGCGTGCGCGGGGCACCACCGTGCGCTTTTACATGTGGGGCGGTTCGGCGCAGGTCAATGCG
TGGGTGGACGGCTATGTGTCTGACAGGATGAAAGAATTGTATGACATTACGGTGCAGCGCGTGCCCATGGACGCCCCCGT
GTTTGTCAACAAGCTGCTGACGGAGAAAGCCGCAGGCAAACAGACCGGTACCATTGACCTGATGTGGATCAACGGCGAGA
ATTTTCGCAATGCCCGTGAAAGCGGCGTGCTCTACGGTCCTTTTGCCGGCAGGCTGCCCAATATGCGTTATGTGGATGCC
GCTGCCGTGGCCACTGATTTCGGCTATCCGGTGCAGGAATACGAAGCACCGCTGGGACGCGCCCAGTTTGTCTTTGAGTA
TGATACGGCAAGAGTCTCCAGCCCTCCGGCATCTTTTGACGAACTGCGCAGCTGGATCAGAGAACACCCCGGGCGGTTCA
CCTATCCGCAGCCGCCCGATTTTACCGGTTCGGCTTTTGTGCGTCAGGTGTTTTATGCAGTGACAGGGGGCCATGAGCAG
TACATGACTGACTTTGACGGAGGCCTGTGGGACAGACAGGCTCCGGCGTTATGGCTGTGGCTTAACGAAATCAAACCCTT
CATGTGGCAGCAGGGCGTCAGCATGCCCAAAGATCCTGCCGCCCTGGATACCCTGTTTGCCCGCGGTGAGGTGGATTTCA
GCATGGCCTATCATCCAAGCCATGCGCAGAGTAAAATTCTGGAAGGCACCTACCCTGACACTGTGAGAACATTCGTCATG
CAAGACGGTTCGCTGTACAACACGCATTTCACGGCCATCGCCTTCAATGCTCCCAACAAGGCGGGGGCCATGGTGCTGGC
TGATTTTCTGCTGTCGCCGCAGGCGCAGGCGCACAAGCTTTCCCCTGCAAACTGGGGGGACTTTCCCGTGCTTGAAATGG
ACCGCCTGAGCGAGGCTGACAGAGAATTGTTTTCCGCTGTGAAGCAGGGCGCGGCAACGCTTGCGCCTGAAAAACTGGCC
GAACACGCCGTGCCGGAAATTCCCGCCCTCTGGCTGGAAGCCATTGAAGAAGGCTGGGACAGACATGTGCTGCGGCAGAA
CCGGCAGTGA

Upstream 100 bases:

>100_bases
GTGCAGGCCCGGCCCGACCGCGGAACAGCATTTGTGGTGCGCCTGCCCTTGCGCAGTGCAGAGTGTCTGCACGAAGAAAA
ACCTGCCGTGGAGAACTGAC

Downstream 100 bases:

>100_bases
CGGCACAGCATAACGACACCTGCGGTGCTGCGTGTCCGCCCCCTTTGCGCAGGGCAGAAGCTCCGGTAAAGGTGCTGCTG
GACATTGACAACGCCATGGG

Product: putative ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MLFTLCRPVCRPACRVHLPARAVAVLLFILFAVPVLTGCSDTPEKTQPAAETESFDTVVQRARGTTVRFYMWGGSAQVNA
WVDGYVSDRMKELYDITVQRVPMDAPVFVNKLLTEKAAGKQTGTIDLMWINGENFRNARESGVLYGPFAGRLPNMRYVDA
AAVATDFGYPVQEYEAPLGRAQFVFEYDTARVSSPPASFDELRSWIREHPGRFTYPQPPDFTGSAFVRQVFYAVTGGHEQ
YMTDFDGGLWDRQAPALWLWLNEIKPFMWQQGVSMPKDPAALDTLFARGEVDFSMAYHPSHAQSKILEGTYPDTVRTFVM
QDGSLYNTHFTAIAFNAPNKAGAMVLADFLLSPQAQAHKLSPANWGDFPVLEMDRLSEADRELFSAVKQGAATLAPEKLA
EHAVPEIPALWLEAIEEGWDRHVLRQNRQ

Sequences:

>Translated_429_residues
MLFTLCRPVCRPACRVHLPARAVAVLLFILFAVPVLTGCSDTPEKTQPAAETESFDTVVQRARGTTVRFYMWGGSAQVNA
WVDGYVSDRMKELYDITVQRVPMDAPVFVNKLLTEKAAGKQTGTIDLMWINGENFRNARESGVLYGPFAGRLPNMRYVDA
AAVATDFGYPVQEYEAPLGRAQFVFEYDTARVSSPPASFDELRSWIREHPGRFTYPQPPDFTGSAFVRQVFYAVTGGHEQ
YMTDFDGGLWDRQAPALWLWLNEIKPFMWQQGVSMPKDPAALDTLFARGEVDFSMAYHPSHAQSKILEGTYPDTVRTFVM
QDGSLYNTHFTAIAFNAPNKAGAMVLADFLLSPQAQAHKLSPANWGDFPVLEMDRLSEADRELFSAVKQGAATLAPEKLA
EHAVPEIPALWLEAIEEGWDRHVLRQNRQ
>Mature_429_residues
MLFTLCRPVCRPACRVHLPARAVAVLLFILFAVPVLTGCSDTPEKTQPAAETESFDTVVQRARGTTVRFYMWGGSAQVNA
WVDGYVSDRMKELYDITVQRVPMDAPVFVNKLLTEKAAGKQTGTIDLMWINGENFRNARESGVLYGPFAGRLPNMRYVDA
AAVATDFGYPVQEYEAPLGRAQFVFEYDTARVSSPPASFDELRSWIREHPGRFTYPQPPDFTGSAFVRQVFYAVTGGHEQ
YMTDFDGGLWDRQAPALWLWLNEIKPFMWQQGVSMPKDPAALDTLFARGEVDFSMAYHPSHAQSKILEGTYPDTVRTFVM
QDGSLYNTHFTAIAFNAPNKAGAMVLADFLLSPQAQAHKLSPANWGDFPVLEMDRLSEADRELFSAVKQGAATLAPEKLA
EHAVPEIPALWLEAIEEGWDRHVLRQNRQ

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081966, Length=375, Percent_Identity=37.6, Blast_Score=219, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48072; Mature: 48072

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFTLCRPVCRPACRVHLPARAVAVLLFILFAVPVLTGCSDTPEKTQPAAETESFDTVVQ
CCHHHHHHHHCHHHEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
RARGTTVRFYMWGGSAQVNAWVDGYVSDRMKELYDITVQRVPMDAPVFVNKLLTEKAAGK
HHCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
QTGTIDLMWINGENFRNARESGVLYGPFAGRLPNMRYVDAAAVATDFGYPVQEYEAPLGR
CCCEEEEEEECCCCCCCHHHCCEEECCCCCCCCCCEEEHHHHHHHHCCCCHHHHHCCCCC
AQFVFEYDTARVSSPPASFDELRSWIREHPGRFTYPQPPDFTGSAFVRQVFYAVTGGHEQ
EEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH
YMTDFDGGLWDRQAPALWLWLNEIKPFMWQQGVSMPKDPAALDTLFARGEVDFSMAYHPS
HHHHCCCCCCCCCCCEEEEEHHHHCHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEECCC
HAQSKILEGTYPDTVRTFVMQDGSLYNTHFTAIAFNAPNKAGAMVLADFLLSPQAQAHKL
HHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHCC
SPANWGDFPVLEMDRLSEADRELFSAVKQGAATLAPEKLAEHAVPEIPALWLEAIEEGWD
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHH
RHVLRQNRQ
HHHHHCCCC
>Mature Secondary Structure
MLFTLCRPVCRPACRVHLPARAVAVLLFILFAVPVLTGCSDTPEKTQPAAETESFDTVVQ
CCHHHHHHHHCHHHEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
RARGTTVRFYMWGGSAQVNAWVDGYVSDRMKELYDITVQRVPMDAPVFVNKLLTEKAAGK
HHCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
QTGTIDLMWINGENFRNARESGVLYGPFAGRLPNMRYVDAAAVATDFGYPVQEYEAPLGR
CCCEEEEEEECCCCCCCHHHCCEEECCCCCCCCCCEEEHHHHHHHHCCCCHHHHHCCCCC
AQFVFEYDTARVSSPPASFDELRSWIREHPGRFTYPQPPDFTGSAFVRQVFYAVTGGHEQ
EEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH
YMTDFDGGLWDRQAPALWLWLNEIKPFMWQQGVSMPKDPAALDTLFARGEVDFSMAYHPS
HHHHCCCCCCCCCCCEEEEEHHHHCHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEECCC
HAQSKILEGTYPDTVRTFVMQDGSLYNTHFTAIAFNAPNKAGAMVLADFLLSPQAQAHKL
HHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHCC
SPANWGDFPVLEMDRLSEADRELFSAVKQGAATLAPEKLAEHAVPEIPALWLEAIEEGWD
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHH
RHVLRQNRQ
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10806384 [H]