| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is lldD [H]
Identifier: 78355797
GI number: 78355797
Start: 776722
End: 777744
Strand: Direct
Name: lldD [H]
Synonym: Dde_0750
Alternate gene names: 78355797
Gene position: 776722-777744 (Clockwise)
Preceding gene: 78355796
Following gene: 78355798
Centisome position: 20.82
GC content: 61.97
Gene sequence:
>1023_bases ATGAAGGAAGTACGCGAAAAGGCAAAAGAACTGATGAAAGGCTATTGCCGGGTCTGTCCCGTGTGCAACGGCAAGGCCTG CGCGGGCGAAGTGCCCGGCATGGGCGGACTGAACACCGCCTCTTCTTTCCGCAACAATGTGGAATCGCTGGCGGCCGTGC AGCTGAACATGCGCCTTATCCATGATGCCGTGCAGCCCGACACCTCGGTGACCGTGCTTGGTATTCCTCTTTCCATGCCT GTCATGGCTGCGCCCATCGGAGGAGTCTCCTTCAACATGGGCGGCGGCATCACCGAAGAAGAGTATGTGAACGCCATTCT GGGCGGCTGCAGACAGCAGGGAGTCATAGGCTGTACGGGCGACGGGGTGCCTCCGTTCATCATCGACGCCGGCATGGACG GCATTGCGGCGGTGGAAGGGCACGGTATTCCGTTCATCAAGCCGTGGGACGGGGAAGAGCTTGACCAGAAGCTTGACCGG GCGCTTGCTTCGGCCTGTCCTGCTGTGGGTATGGATATCGATGCCGCGGGGCTGGTTACGCTGCGCAAGATGGGCAGACC TGTGTCGCCCAAAACACCGGCGCAGCTGAAAGCCGTTGTGGACAAAGTGCACGCGGCAGGCCGGACGTTTATCCTGAAGG GCATCATGACGGTGGTGGATGCCCAGCTGGCGGTGGAAGTGGGTGCCGACGCCATTGTGGTTTCCAACCACGGCGGGCGC GTGCTTGACCATACGCCGGGTGCCGCGGAAGTGCTGCCCGAAATCGCCGATGCCGTGAAGGGCCGCATTACCGTGCTGGC GGACGGCGGTGTGCGTGACGGGTTTGATGTGATCAAAATGCTTGCTCTGGGCGCCGATGCCGTGCTTATCGGACGTCCTT TCAGCATTGCCGCGGTGGGCGGTCAGGCCGAAGGCGTGGCTGCATACCTTGAAGCGCTGCGCGGCCAGCTTGTGCAGGCC ATGGTGCTTACAGGCTGCCGCAGCGTGCAGGAAGCCGGACGGCATATACTGCGCGGAATCTGA
Upstream 100 bases:
>100_bases TTCAGAAGGGCTGCCGCGCAACGCGGCGTGCCGCAGGCAGGGTGTCCGCACACACTCATCACACAAATGCCGCCACGACG GCCAAGGAGGATTCTCCGGC
Downstream 100 bases:
>100_bases TGCAGAATACGGCCCGCGGCATGCTGTCGCGGGCTTTTTTTAACGGACGGCGGGCTTACTATCATGATAGAATCTCTTGC TCTTTACATCGCGCTTGGTT
Product: FMN-dependent family dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKEVREKAKELMKGYCRVCPVCNGKACAGEVPGMGGLNTASSFRNNVESLAAVQLNMRLIHDAVQPDTSVTVLGIPLSMP VMAAPIGGVSFNMGGGITEEEYVNAILGGCRQQGVIGCTGDGVPPFIIDAGMDGIAAVEGHGIPFIKPWDGEELDQKLDR ALASACPAVGMDIDAAGLVTLRKMGRPVSPKTPAQLKAVVDKVHAAGRTFILKGIMTVVDAQLAVEVGADAIVVSNHGGR VLDHTPGAAEVLPEIADAVKGRITVLADGGVRDGFDVIKMLALGADAVLIGRPFSIAAVGGQAEGVAAYLEALRGQLVQA MVLTGCRSVQEAGRHILRGI
Sequences:
>Translated_340_residues MKEVREKAKELMKGYCRVCPVCNGKACAGEVPGMGGLNTASSFRNNVESLAAVQLNMRLIHDAVQPDTSVTVLGIPLSMP VMAAPIGGVSFNMGGGITEEEYVNAILGGCRQQGVIGCTGDGVPPFIIDAGMDGIAAVEGHGIPFIKPWDGEELDQKLDR ALASACPAVGMDIDAAGLVTLRKMGRPVSPKTPAQLKAVVDKVHAAGRTFILKGIMTVVDAQLAVEVGADAIVVSNHGGR VLDHTPGAAEVLPEIADAVKGRITVLADGGVRDGFDVIKMLALGADAVLIGRPFSIAAVGGQAEGVAAYLEALRGQLVQA MVLTGCRSVQEAGRHILRGI >Mature_340_residues MKEVREKAKELMKGYCRVCPVCNGKACAGEVPGMGGLNTASSFRNNVESLAAVQLNMRLIHDAVQPDTSVTVLGIPLSMP VMAAPIGGVSFNMGGGITEEEYVNAILGGCRQQGVIGCTGDGVPPFIIDAGMDGIAAVEGHGIPFIKPWDGEELDQKLDR ALASACPAVGMDIDAAGLVTLRKMGRPVSPKTPAQLKAVVDKVHAAGRTFILKGIMTVVDAQLAVEVGADAIVVSNHGGR VLDHTPGAAEVLPEIADAVKGRITVLADGGVRDGFDVIKMLALGADAVLIGRPFSIAAVGGQAEGVAAYLEALRGQLVQA MVLTGCRSVQEAGRHILRGI
Specific function: Unknown
COG id: COG1304
COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FMN hydroxy acid dehydrogenase domain [H]
Homologues:
Organism=Homo sapiens, GI54234014, Length=326, Percent_Identity=28.5276073619632, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI7705393, Length=326, Percent_Identity=28.5276073619632, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI11068137, Length=128, Percent_Identity=45.3125, Blast_Score=106, Evalue=4e-23, Organism=Escherichia coli, GI1790033, Length=122, Percent_Identity=54.9180327868852, Blast_Score=119, Evalue=4e-28, Organism=Caenorhabditis elegans, GI193208036, Length=121, Percent_Identity=47.1074380165289, Blast_Score=105, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6323587, Length=132, Percent_Identity=38.6363636363636, Blast_Score=83, Evalue=6e-17, Organism=Drosophila melanogaster, GI281363140, Length=119, Percent_Identity=41.1764705882353, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI78707190, Length=119, Percent_Identity=41.1764705882353, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI78707188, Length=119, Percent_Identity=41.1764705882353, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR012133 - InterPro: IPR000262 - InterPro: IPR008259 - InterPro: IPR020920 [H]
Pfam domain/function: PF01070 FMN_dh [H]
EC number: =1.1.2.3 [H]
Molecular weight: Translated: 35088; Mature: 35088
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVREKAKELMKGYCRVCPVCNGKACAGEVPGMGGLNTASSFRNNVESLAAVQLNMRLI CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HDAVQPDTSVTVLGIPLSMPVMAAPIGGVSFNMGGGITEEEYVNAILGGCRQQGVIGCTG HHHHCCCCCEEEEECCCCCCHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEECC DGVPPFIIDAGMDGIAAVEGHGIPFIKPWDGEELDQKLDRALASACPAVGMDIDAAGLVT CCCCCEEEECCCCCEEEECCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LRKMGRPVSPKTPAQLKAVVDKVHAAGRTFILKGIMTVVDAQLAVEVGADAIVVSNHGGR HHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE VLDHTPGAAEVLPEIADAVKGRITVLADGGVRDGFDVIKMLALGADAVLIGRPFSIAAVG EEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCEEEEEEC GQAEGVAAYLEALRGQLVQAMVLTGCRSVQEAGRHILRGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKEVREKAKELMKGYCRVCPVCNGKACAGEVPGMGGLNTASSFRNNVESLAAVQLNMRLI CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HDAVQPDTSVTVLGIPLSMPVMAAPIGGVSFNMGGGITEEEYVNAILGGCRQQGVIGCTG HHHHCCCCCEEEEECCCCCCHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEECC DGVPPFIIDAGMDGIAAVEGHGIPFIKPWDGEELDQKLDRALASACPAVGMDIDAAGLVT CCCCCEEEECCCCCEEEECCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LRKMGRPVSPKTPAQLKAVVDKVHAAGRTFILKGIMTVVDAQLAVEVGADAIVVSNHGGR HHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE VLDHTPGAAEVLPEIADAVKGRITVLADGGVRDGFDVIKMLALGADAVLIGRPFSIAAVG EEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCEEEEEEC GQAEGVAAYLEALRGQLVQAMVLTGCRSVQEAGRHILRGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA