| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is mtaD [H]
Identifier: 78355749
GI number: 78355749
Start: 718942
End: 720309
Strand: Direct
Name: mtaD [H]
Synonym: Dde_0702
Alternate gene names: 78355749
Gene position: 718942-720309 (Clockwise)
Preceding gene: 78355748
Following gene: 78355753
Centisome position: 19.27
GC content: 59.72
Gene sequence:
>1368_bases ATGGGTACCATTCTTCTCCGCAATGCGACTATTCTTTCCATGGATTCGGAACGCCGTGTTTTTGAAAACGGCGATGTGCT GGTCAGAGACGACCGTATAGCCGCTGTGGGGGCAGTTGACCCCGCAGAGGCGGATCAGGCGGACGAGGTGGTGGACCTGA CAGGGCGCATGGTGCTGCCCGGTCTGGTTAACACGCATGTGCACACATCGCAGCAGCTTGAGCGAGGTCTTGCGGATGAC GTGGATCTGCTTACCTGGCTGCACGACCGTACATGGCCCTTTGAAAGTGCACTTACAGAGGAAGACCAGTACCTTTCGAC CCTTGCCTGCGGTTGCGAACTTATCCGCTCGGGCGTGACCACGTTTGCAGAGGCGGGCGGGCAGCATATGGACGCCACCG GCCGCGCTGTGGAAAATCTGGGGCTGCGCGCCCGTCTGTGCATTTCAAGCATGGACTGCGGCGAAGGGCTGCCTGAAGGG TGGGTGCGCCCCATACAGGAGGTGCTGGCAGAGCAGAAGGGATTGTATGACCGCTGGCACGGCAAGGCCGGCGGCCGTAT CGGAGTATGGTTCGGCCTGCGTACCATTTTCAACTGCTCCGATGAACTGATTGTGGCCACCAAGGATATGGCAGACACCC TGCAGACCGGTGTGCATATGCATGTGGCCGAAATTCAGGAAGAAGTCCGTTTTGCCCGGCAGACCCGCGGTGCCTCGACA GTGGAACATCTGGGTGCGCTGGGCGCGCTGGGACCCAATCTGCTGGCCGTGCATCATGTATGGCTTACCGCAAAAGAAGT GGACCTGCTGGCGCTGCATGATGTGAAAACATCGCACAACGCCGCTGCCGCCATGCGGTATCTGGGCTTTGCTCCGGTGC CGGAAATGCTGCGCAAGGGCGTGGCCGTTTCCATAGGCACGGACGGGGCACCCAGCAACAACCATATGGACATGATGAGT GAAATGTACCTTGTTTCGCTGATTCATAAAGGACGGCACCTTGACCCGTGTGCCGTAACGGCGGACAAGGTGCTTGAAAT GGCCACCGTCATGGGGGCCCGCTGTATGCTGATGGATGATTCCATAGGCTCGCTGAGCGAAGGCATGAAGGCCGACCTGA TGGTGGTGAATCCGCGCGACTTCGGGTCATTGCCGGTGCACGACCCTGTGTCGGCGCTGGTGGGCGCCATGTATTCCGCC AATGTGGAATCGTCCATGTGTGACGGCCGCTGGCTGATGCGTGACAGAAAGGTGCTGACCGTGGATATGGAAGGGCTGCT GGACGAAATACAGTCCAGAGCCGATGCCGTGCGCAGACGGGCCGGCATTGAGCTGCCGCCCCGTTTTCCCGTGGTCAGAG TGCGGTAG
Upstream 100 bases:
>100_bases GTCCGTTATCTTGTGGAATCCGGCATCGCCGTGGGCGCGGTTTCCGCTGTCGTTCTCAATCTCATCCTGCCTAAGGACGC AGAATAATCAAGGAAACGTC
Downstream 100 bases:
>100_bases TTTTTTGCACGGAATAAACCGGCCGGTGCATGCACCGGCCGGTTTTTTTTATTCAGTTTGCGCAGCGTGTTGCCGGAGTC AGCTTTTGGACAGCATGTCC
Product: chlorohydrolase family protein
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MGTILLRNATILSMDSERRVFENGDVLVRDDRIAAVGAVDPAEADQADEVVDLTGRMVLPGLVNTHVHTSQQLERGLADD VDLLTWLHDRTWPFESALTEEDQYLSTLACGCELIRSGVTTFAEAGGQHMDATGRAVENLGLRARLCISSMDCGEGLPEG WVRPIQEVLAEQKGLYDRWHGKAGGRIGVWFGLRTIFNCSDELIVATKDMADTLQTGVHMHVAEIQEEVRFARQTRGAST VEHLGALGALGPNLLAVHHVWLTAKEVDLLALHDVKTSHNAAAAMRYLGFAPVPEMLRKGVAVSIGTDGAPSNNHMDMMS EMYLVSLIHKGRHLDPCAVTADKVLEMATVMGARCMLMDDSIGSLSEGMKADLMVVNPRDFGSLPVHDPVSALVGAMYSA NVESSMCDGRWLMRDRKVLTVDMEGLLDEIQSRADAVRRRAGIELPPRFPVVRVR
Sequences:
>Translated_455_residues MGTILLRNATILSMDSERRVFENGDVLVRDDRIAAVGAVDPAEADQADEVVDLTGRMVLPGLVNTHVHTSQQLERGLADD VDLLTWLHDRTWPFESALTEEDQYLSTLACGCELIRSGVTTFAEAGGQHMDATGRAVENLGLRARLCISSMDCGEGLPEG WVRPIQEVLAEQKGLYDRWHGKAGGRIGVWFGLRTIFNCSDELIVATKDMADTLQTGVHMHVAEIQEEVRFARQTRGAST VEHLGALGALGPNLLAVHHVWLTAKEVDLLALHDVKTSHNAAAAMRYLGFAPVPEMLRKGVAVSIGTDGAPSNNHMDMMS EMYLVSLIHKGRHLDPCAVTADKVLEMATVMGARCMLMDDSIGSLSEGMKADLMVVNPRDFGSLPVHDPVSALVGAMYSA NVESSMCDGRWLMRDRKVLTVDMEGLLDEIQSRADAVRRRAGIELPPRFPVVRVR >Mature_454_residues GTILLRNATILSMDSERRVFENGDVLVRDDRIAAVGAVDPAEADQADEVVDLTGRMVLPGLVNTHVHTSQQLERGLADDV DLLTWLHDRTWPFESALTEEDQYLSTLACGCELIRSGVTTFAEAGGQHMDATGRAVENLGLRARLCISSMDCGEGLPEGW VRPIQEVLAEQKGLYDRWHGKAGGRIGVWFGLRTIFNCSDELIVATKDMADTLQTGVHMHVAEIQEEVRFARQTRGASTV EHLGALGALGPNLLAVHHVWLTAKEVDLLALHDVKTSHNAAAAMRYLGFAPVPEMLRKGVAVSIGTDGAPSNNHMDMMSE MYLVSLIHKGRHLDPCAVTADKVLEMATVMGARCMLMDDSIGSLSEGMKADLMVVNPRDFGSLPVHDPVSALVGAMYSAN VESSMCDGRWLMRDRKVLTVDMEGLLDEIQSRADAVRRRAGIELPPRFPVVRVR
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=384, Percent_Identity=23.4375, Blast_Score=98, Evalue=1e-20, Organism=Escherichia coli, GI87082177, Length=461, Percent_Identity=25.3796095444685, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1789249, Length=380, Percent_Identity=26.5789473684211, Blast_Score=96, Evalue=4e-21, Organism=Drosophila melanogaster, GI24643849, Length=407, Percent_Identity=23.5872235872236, Blast_Score=96, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 49740; Mature: 49608
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTILLRNATILSMDSERRVFENGDVLVRDDRIAAVGAVDPAEADQADEVVDLTGRMVLP CCEEEEECEEEEECCCCCHHHCCCCEEEECCCEEEECCCCCCCCCCHHHHHHHCCCEECC GLVNTHVHTSQQLERGLADDVDLLTWLHDRTWPFESALTEEDQYLSTLACGCELIRSGVT CHHHCCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH TFAEAGGQHMDATGRAVENLGLRARLCISSMDCGEGLPEGWVRPIQEVLAEQKGLYDRWH HHHHCCCCCCCHHHHHHHHCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHC GKAGGRIGVWFGLRTIFNCSDELIVATKDMADTLQTGVHMHVAEIQEEVRFARQTRGAST CCCCCEEEEHHHHHHHHCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH VEHLGALGALGPNLLAVHHVWLTAKEVDLLALHDVKTSHNAAAAMRYLGFAPVPEMLRKG HHHHHHHHCCCCHHHHHHHHHEECCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHCC VAVSIGTDGAPSNNHMDMMSEMYLVSLIHKGRHLDPCAVTADKVLEMATVMGARCMLMDD EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEC SIGSLSEGMKADLMVVNPRDFGSLPVHDPVSALVGAMYSANVESSMCDGRWLMRDRKVLT CCCHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHCCCEEEE VDMEGLLDEIQSRADAVRRRAGIELPPRFPVVRVR EEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC >Mature Secondary Structure GTILLRNATILSMDSERRVFENGDVLVRDDRIAAVGAVDPAEADQADEVVDLTGRMVLP CEEEEECEEEEECCCCCHHHCCCCEEEECCCEEEECCCCCCCCCCHHHHHHHCCCEECC GLVNTHVHTSQQLERGLADDVDLLTWLHDRTWPFESALTEEDQYLSTLACGCELIRSGVT CHHHCCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH TFAEAGGQHMDATGRAVENLGLRARLCISSMDCGEGLPEGWVRPIQEVLAEQKGLYDRWH HHHHCCCCCCCHHHHHHHHCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHC GKAGGRIGVWFGLRTIFNCSDELIVATKDMADTLQTGVHMHVAEIQEEVRFARQTRGAST CCCCCEEEEHHHHHHHHCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH VEHLGALGALGPNLLAVHHVWLTAKEVDLLALHDVKTSHNAAAAMRYLGFAPVPEMLRKG HHHHHHHHCCCCHHHHHHHHHEECCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHCC VAVSIGTDGAPSNNHMDMMSEMYLVSLIHKGRHLDPCAVTADKVLEMATVMGARCMLMDD EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEC SIGSLSEGMKADLMVVNPRDFGSLPVHDPVSALVGAMYSANVESSMCDGRWLMRDRKVLT CCCHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHCCCEEEE VDMEGLLDEIQSRADAVRRRAGIELPPRFPVVRVR EEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA