| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is cpx [H]
Identifier: 78355748
GI number: 78355748
Start: 717621
End: 718928
Strand: Direct
Name: cpx [H]
Synonym: Dde_0701
Alternate gene names: 78355748
Gene position: 717621-718928 (Clockwise)
Preceding gene: 78355744
Following gene: 78355749
Centisome position: 19.24
GC content: 59.25
Gene sequence:
>1308_bases ATGAGCCGCAATACCGAACTGCACCTTACGGTAGGTGTGGATGAGCCTGTTTCCCCCCTGAAAGCGTTTGCACTGGGCCT GCAGCATGTGCTTGCCATGGATGTGTATATTGCTCCTTTTGTCATGGCCGGGCTGCTTTCGCTTTCCGTGCCGGAAACCG CAACTTTCATTCAGATGACCTTTGTGGCTGCGGGGCTGGCCACACTTATCCAGGCGGGGTTCGGCATCCGCCTGCCTGTC ATGCAGGGACCTTCCTATGTGCCCATCGGGGCGCTGGCCGCCATAGGCAATTCTCTGGGGCTGGGCGCCATGTTCGGTTC TCTGCTGCCGGGGGCGCTTGTCATGACGTTGCTCGGCAAACCGCTGCGTGTGTTCAGCAGGATTGTGCGTTTTTTCATTC CGCCGCTTGTGGGGGGCACTGTCATTGTCATTGTGGGCATTGCGCTTATGCCTGTGGCACTCAAGGGGTGCTACGGATAT TTCGGCGATCCTGCGCATAATGCCGTCGTGGCGCTGGTGTCCGCTGCGGTGCTGGTGGTGCTCACTGTTGCCGGTTCGCG TCCCGGCAGATTTAATCAGGTGGTGCGCATGGGGTCTGTTGTTTTCAGCATGGCAGCAGGAACCCTTACCGCCGCCGCCT TCGGCATGGTGAATTTTGACAGCGTGGCCGCCGCCCCGTGGCTGGCGCTGCCTGTTATCTTTCCCTACGGTACTCCGCAT ATCGACGTCTCCGCCGCGCTGACGCTGGTGTTCATATACCTTGTGGTGCTGGTGGAAACCACGGGAACGTGGTTTGCCGT GGAGGCGGTGACAGGTTCGCGTCTGGATGATGAACGGATAAACGGCGGAACCTTCGGCGAAGGTGTGGGCTGTTTTCTGG GTGCCATGCTGGGCGGCACGCCTGTGACAGGCTATTCCACCAATGCGGGCATCATTGCCATTACCGGCGTTGCCAGCCGA TGGGCCATCATGGCGGGCGGAGGAATTCTGCTGGTGCTGGGCATGGTGCCCAAGCTGATGAACGTCATTGCCAGTATTCC CGGACCGGTCATCAGCGGTGTTTTTGCCGTCATCTGCGTGGTCATTGCCATGAACGGTTTCCGCGTGGTGCGTACCGTCA CGCTTTCCGAACGTAACATGCTGGTTATGGGGCTGCCCATTCTGCTTACGCTGGCCGCTGTTTTCATGCCTGCCGAACTG CGTGACCGTCTGCCCGCGCTGGTCCGTTATCTTGTGGAATCCGGCATCGCCGTGGGCGCGGTTTCCGCTGTCGTTCTCAA TCTCATCCTGCCTAAGGACGCAGAATAA
Upstream 100 bases:
>100_bases CGCTGCAGCGCATGCGCTCTTTACATGCGCTGCGTGAAAGAGTACCGAAAGCCCCCTGCGTCACACTCAACTTTTTTTGC ATCAGTACGGAGGGCCGCTG
Downstream 100 bases:
>100_bases TCAAGGAAACGTCATGGGTACCATTCTTCTCCGCAATGCGACTATTCTTTCCATGGATTCGGAACGCCGTGTTTTTGAAA ACGGCGATGTGCTGGTCAGA
Product: xanthine/uracil permease family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSRNTELHLTVGVDEPVSPLKAFALGLQHVLAMDVYIAPFVMAGLLSLSVPETATFIQMTFVAAGLATLIQAGFGIRLPV MQGPSYVPIGALAAIGNSLGLGAMFGSLLPGALVMTLLGKPLRVFSRIVRFFIPPLVGGTVIVIVGIALMPVALKGCYGY FGDPAHNAVVALVSAAVLVVLTVAGSRPGRFNQVVRMGSVVFSMAAGTLTAAAFGMVNFDSVAAAPWLALPVIFPYGTPH IDVSAALTLVFIYLVVLVETTGTWFAVEAVTGSRLDDERINGGTFGEGVGCFLGAMLGGTPVTGYSTNAGIIAITGVASR WAIMAGGGILLVLGMVPKLMNVIASIPGPVISGVFAVICVVIAMNGFRVVRTVTLSERNMLVMGLPILLTLAAVFMPAEL RDRLPALVRYLVESGIAVGAVSAVVLNLILPKDAE
Sequences:
>Translated_435_residues MSRNTELHLTVGVDEPVSPLKAFALGLQHVLAMDVYIAPFVMAGLLSLSVPETATFIQMTFVAAGLATLIQAGFGIRLPV MQGPSYVPIGALAAIGNSLGLGAMFGSLLPGALVMTLLGKPLRVFSRIVRFFIPPLVGGTVIVIVGIALMPVALKGCYGY FGDPAHNAVVALVSAAVLVVLTVAGSRPGRFNQVVRMGSVVFSMAAGTLTAAAFGMVNFDSVAAAPWLALPVIFPYGTPH IDVSAALTLVFIYLVVLVETTGTWFAVEAVTGSRLDDERINGGTFGEGVGCFLGAMLGGTPVTGYSTNAGIIAITGVASR WAIMAGGGILLVLGMVPKLMNVIASIPGPVISGVFAVICVVIAMNGFRVVRTVTLSERNMLVMGLPILLTLAAVFMPAEL RDRLPALVRYLVESGIAVGAVSAVVLNLILPKDAE >Mature_434_residues SRNTELHLTVGVDEPVSPLKAFALGLQHVLAMDVYIAPFVMAGLLSLSVPETATFIQMTFVAAGLATLIQAGFGIRLPVM QGPSYVPIGALAAIGNSLGLGAMFGSLLPGALVMTLLGKPLRVFSRIVRFFIPPLVGGTVIVIVGIALMPVALKGCYGYF GDPAHNAVVALVSAAVLVVLTVAGSRPGRFNQVVRMGSVVFSMAAGTLTAAAFGMVNFDSVAAAPWLALPVIFPYGTPHI DVSAALTLVFIYLVVLVETTGTWFAVEAVTGSRLDDERINGGTFGEGVGCFLGAMLGGTPVTGYSTNAGIIAITGVASRW AIMAGGGILLVLGMVPKLMNVIASIPGPVISGVFAVICVVIAMNGFRVVRTVTLSERNMLVMGLPILLTLAAVFMPAELR DRLPALVRYLVESGIAVGAVSAVVLNLILPKDAE
Specific function: Unknown
COG id: COG2233
COG function: function code F; Xanthine/uracil permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]
Homologues:
Organism=Homo sapiens, GI44680145, Length=175, Percent_Identity=32, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI44680143, Length=175, Percent_Identity=32, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI44680148, Length=222, Percent_Identity=27.9279279279279, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI40316845, Length=222, Percent_Identity=27.9279279279279, Blast_Score=86, Evalue=1e-16, Organism=Escherichia coli, GI87082181, Length=431, Percent_Identity=30.8584686774942, Blast_Score=161, Evalue=8e-41, Organism=Escherichia coli, GI1790087, Length=458, Percent_Identity=30.1310043668122, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI87082178, Length=434, Percent_Identity=28.110599078341, Blast_Score=118, Evalue=8e-28, Organism=Escherichia coli, GI87081818, Length=383, Percent_Identity=28.7206266318538, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788843, Length=368, Percent_Identity=27.445652173913, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87081750, Length=420, Percent_Identity=24.047619047619, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17541904, Length=453, Percent_Identity=25.60706401766, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17558856, Length=433, Percent_Identity=24.4803695150115, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17542262, Length=191, Percent_Identity=28.2722513089005, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI21356175, Length=481, Percent_Identity=23.9085239085239, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017588 - InterPro: IPR006042 - InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 44977; Mature: 44845
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNTELHLTVGVDEPVSPLKAFALGLQHVLAMDVYIAPFVMAGLLSLSVPETATFIQMT CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FVAAGLATLIQAGFGIRLPVMQGPSYVPIGALAAIGNSLGLGAMFGSLLPGALVMTLLGK HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC PLRVFSRIVRFFIPPLVGGTVIVIVGIALMPVALKGCYGYFGDPAHNAVVALVSAAVLVV HHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LTVAGSRPGRFNQVVRMGSVVFSMAAGTLTAAAFGMVNFDSVAAAPWLALPVIFPYGTPH HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHEEECCCCCC IDVSAALTLVFIYLVVLVETTGTWFAVEAVTGSRLDDERINGGTFGEGVGCFLGAMLGGT CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC PVTGYSTNAGIIAITGVASRWAIMAGGGILLVLGMVPKLMNVIASIPGPVISGVFAVICV CCCCCCCCCCEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VIAMNGFRVVRTVTLSERNMLVMGLPILLTLAAVFMPAELRDRLPALVRYLVESGIAVGA HHHHCCCEEEEEEEECCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHH VSAVVLNLILPKDAE HHHHHHHHHCCCCCC >Mature Secondary Structure SRNTELHLTVGVDEPVSPLKAFALGLQHVLAMDVYIAPFVMAGLLSLSVPETATFIQMT CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FVAAGLATLIQAGFGIRLPVMQGPSYVPIGALAAIGNSLGLGAMFGSLLPGALVMTLLGK HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC PLRVFSRIVRFFIPPLVGGTVIVIVGIALMPVALKGCYGYFGDPAHNAVVALVSAAVLVV HHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LTVAGSRPGRFNQVVRMGSVVFSMAAGTLTAAAFGMVNFDSVAAAPWLALPVIFPYGTPH HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHEEECCCCCC IDVSAALTLVFIYLVVLVETTGTWFAVEAVTGSRLDDERINGGTFGEGVGCFLGAMLGGT CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC PVTGYSTNAGIIAITGVASRWAIMAGGGILLVLGMVPKLMNVIASIPGPVISGVFAVICV CCCCCCCCCCEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VIAMNGFRVVRTVTLSERNMLVMGLPILLTLAAVFMPAELRDRLPALVRYLVESGIAVGA HHHHCCCEEEEEEEECCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHH VSAVVLNLILPKDAE HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11792842; 8162194 [H]