| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is amsG [H]
Identifier: 78355528
GI number: 78355528
Start: 490262
End: 491662
Strand: Direct
Name: amsG [H]
Synonym: Dde_0481
Alternate gene names: 78355528
Gene position: 490262-491662 (Clockwise)
Preceding gene: 78355527
Following gene: 78355530
Centisome position: 13.14
GC content: 58.17
Gene sequence:
>1401_bases ATGAATGAGGGATGTACGCTGCAGGGCGGTTGCCGGCTGATGACTTCCGGCATGCGTATGACGCTGCTGATGCTGGCATC GGATATCTTTGCACTGGTCTGCGCCATCGGGGCCGCTGTGGTGGTCCGGTATCTGTTTGACGGGCAGTTTCATATTTCCT TTTATCTGCGGTGTGCGCCGGTGGTGGTGTTTTTTCTGGCGGCATATGCCATGCGCGGGCTTTATCCCGGAGTACTGATG GCTCCTCATGAGGAACTGAAAGGCCTGACACTGGGTACAACATTGATTTTCTTCTTTCTCATCACCACCACCTTTTTTTT CAAAGCCAGTGAAGAATTTTCGCGTCTGGTGATGCTGGGCGGATGGCTGGGGTCGGTCATTCTGGTGCCGTTCTGCCGTA TTGCCGTGCGCCGGCGGTTTTCACGCCGGCCGTGGTGGGGGATTCCCGCCGTGATATGGGGGGCAGGAGCCGACGCCGAC ACATTGGCCGGGCGCTTCAGTAAAGACCGGCGGCAGGGGATCAGCGTGCTTGGCACGGTGCAGCCCGATGATGCAGGCGA TGACCGCCTGCAGCCGCTGAGAGAGTACGCCGCCATGCGACCGCAGCCCATGCTGGTGTGCACGCCTGAAAGTCGCGATT TGTTTTTTTCCGACGAGGTGCTGCGTATCGAGGAATTGTTTGAGCGGACGCTGGTCATGCCGCCCAAGGCTTTCGATGCA CTTAATGTTCAGGTGCGCGATGTGGGGGGTGTGCTTTTTTTCCAGATGCAGACCAAACTGCTCGACCCTGTGCGCCAGCG GCTTAAGCGGACACTGGACCTGACGGTCATCATGCTGGCGCTGCCCGTGCTGCTGCCGGTCATGGCGGTGCTGGCCGCCG CGGTGCGTCTGGAAGGGGGCGGACCGGTCTTTTATTCACAGCCGCGCATCGGACGGTGGGGCAGACACTTCAGAATCATC AAGTTCCGGACCATGGTGTGCAATGCGGATACGGTGCTGCAGCAGCATCTGGCGCAGCACCCCGAACTGGCCGAAGAATG GGCTGAAAATCAGAAGCTGCGCTGTGATCCGCGTATAACCGCCATTGGCGGCTTTTTGCGGCGTACCAGTCTGGACGAAC TGCCGCAGCTGCTTAATGTGCTGCGTGGTGAAATGAGTCTGGTGGGGCCCCGGCCCATAGTGGATGCGGAAGTACCGCGT TATGGCGAGGCGTTTGAACTGTACAAGCGCACTCTGCCGGGCATTTCAGGCTTGTGGCAGATATCCGGACGCAATGACAC GACGTATGAAGAGCGTGTGATGCTGGATACCTATTATTCACGCAACTGGTCGGTGTGGATGGATCTGCATGTGCTTTCAC GCACATTGTGGGTGGTTATTAAACGCAGCGGTGCATACTAG
Upstream 100 bases:
>100_bases TACCGGACATGGTGGCTTGCCATGGGACTTATGATGTTTGGGTGTATCATGGGAGCGGTGGTTTCCGCCGGCAGGTGCAC CCGCGGGGAGGCTGTGCCCC
Downstream 100 bases:
>100_bases CTGCGGTTTTGCATGCGGACTGTGACAAGCCCCGCCGGTAACCGGCGGGGTTTTTTTCGTGGTGCGGCAGTCTGACCGGA TGCGTTGTCCGGCAGGCGTG
Product: undecaprenyl-phosphate galactosephosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MNEGCTLQGGCRLMTSGMRMTLLMLASDIFALVCAIGAAVVVRYLFDGQFHISFYLRCAPVVVFFLAAYAMRGLYPGVLM APHEELKGLTLGTTLIFFFLITTTFFFKASEEFSRLVMLGGWLGSVILVPFCRIAVRRRFSRRPWWGIPAVIWGAGADAD TLAGRFSKDRRQGISVLGTVQPDDAGDDRLQPLREYAAMRPQPMLVCTPESRDLFFSDEVLRIEELFERTLVMPPKAFDA LNVQVRDVGGVLFFQMQTKLLDPVRQRLKRTLDLTVIMLALPVLLPVMAVLAAAVRLEGGGPVFYSQPRIGRWGRHFRII KFRTMVCNADTVLQQHLAQHPELAEEWAENQKLRCDPRITAIGGFLRRTSLDELPQLLNVLRGEMSLVGPRPIVDAEVPR YGEAFELYKRTLPGISGLWQISGRNDTTYEERVMLDTYYSRNWSVWMDLHVLSRTLWVVIKRSGAY
Sequences:
>Translated_466_residues MNEGCTLQGGCRLMTSGMRMTLLMLASDIFALVCAIGAAVVVRYLFDGQFHISFYLRCAPVVVFFLAAYAMRGLYPGVLM APHEELKGLTLGTTLIFFFLITTTFFFKASEEFSRLVMLGGWLGSVILVPFCRIAVRRRFSRRPWWGIPAVIWGAGADAD TLAGRFSKDRRQGISVLGTVQPDDAGDDRLQPLREYAAMRPQPMLVCTPESRDLFFSDEVLRIEELFERTLVMPPKAFDA LNVQVRDVGGVLFFQMQTKLLDPVRQRLKRTLDLTVIMLALPVLLPVMAVLAAAVRLEGGGPVFYSQPRIGRWGRHFRII KFRTMVCNADTVLQQHLAQHPELAEEWAENQKLRCDPRITAIGGFLRRTSLDELPQLLNVLRGEMSLVGPRPIVDAEVPR YGEAFELYKRTLPGISGLWQISGRNDTTYEERVMLDTYYSRNWSVWMDLHVLSRTLWVVIKRSGAY >Mature_466_residues MNEGCTLQGGCRLMTSGMRMTLLMLASDIFALVCAIGAAVVVRYLFDGQFHISFYLRCAPVVVFFLAAYAMRGLYPGVLM APHEELKGLTLGTTLIFFFLITTTFFFKASEEFSRLVMLGGWLGSVILVPFCRIAVRRRFSRRPWWGIPAVIWGAGADAD TLAGRFSKDRRQGISVLGTVQPDDAGDDRLQPLREYAAMRPQPMLVCTPESRDLFFSDEVLRIEELFERTLVMPPKAFDA LNVQVRDVGGVLFFQMQTKLLDPVRQRLKRTLDLTVIMLALPVLLPVMAVLAAAVRLEGGGPVFYSQPRIGRWGRHFRII KFRTMVCNADTVLQQHLAQHPELAEEWAENQKLRCDPRITAIGGFLRRTSLDELPQLLNVLRGEMSLVGPRPIVDAEVPR YGEAFELYKRTLPGISGLWQISGRNDTTYEERVMLDTYYSRNWSVWMDLHVLSRTLWVVIKRSGAY
Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor. May act as a sugar transferase and may be involved in the export of the repeating unit by flipping the lipid carrier to the periplasmic face of the inner membrane [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=239, Percent_Identity=36.8200836820084, Blast_Score=136, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017472 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 52825; Mature: 52825
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEGCTLQGGCRLMTSGMRMTLLMLASDIFALVCAIGAAVVVRYLFDGQFHISFYLRCAP CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHH VVVFFLAAYAMRGLYPGVLMAPHEELKGLTLGTTLIFFFLITTTFFFKASEEFSRLVMLG HHHHHHHHHHHHCCCCCCEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWLGSVILVPFCRIAVRRRFSRRPWWGIPAVIWGAGADADTLAGRFSKDRRQGISVLGTV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEECCCCCHHHHHHHHHHHHHCCCEEEEEE QPDDAGDDRLQPLREYAAMRPQPMLVCTPESRDLFFSDEVLRIEELFERTLVMPPKAFDA CCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCEECCHHHHHHHHHHHHCCCCCCCCCC LNVQVRDVGGVLFFQMQTKLLDPVRQRLKRTLDLTVIMLALPVLLPVMAVLAAAVRLEGG CCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC GPVFYSQPRIGRWGRHFRIIKFRTMVCNADTVLQQHLAQHPELAEEWAENQKLRCDPRIT CCEEECCCCCCCCCCCEEEEEEEEEHCCHHHHHHHHHHCCCHHHHHHHCCCCEECCCCHH AIGGFLRRTSLDELPQLLNVLRGEMSLVGPRPIVDAEVPRYGEAFELYKRTLPGISGLWQ HHHHHHHHCCHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE ISGRNDTTYEERVMLDTYYSRNWSVWMDLHVLSRTLWVVIKRSGAY ECCCCCCCHHHHEEEEHHHCCCCEEEEHHHHHHHHHHHHEECCCCC >Mature Secondary Structure MNEGCTLQGGCRLMTSGMRMTLLMLASDIFALVCAIGAAVVVRYLFDGQFHISFYLRCAP CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHH VVVFFLAAYAMRGLYPGVLMAPHEELKGLTLGTTLIFFFLITTTFFFKASEEFSRLVMLG HHHHHHHHHHHHCCCCCCEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWLGSVILVPFCRIAVRRRFSRRPWWGIPAVIWGAGADADTLAGRFSKDRRQGISVLGTV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEECCCCCHHHHHHHHHHHHHCCCEEEEEE QPDDAGDDRLQPLREYAAMRPQPMLVCTPESRDLFFSDEVLRIEELFERTLVMPPKAFDA CCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCEECCHHHHHHHHHHHHCCCCCCCCCC LNVQVRDVGGVLFFQMQTKLLDPVRQRLKRTLDLTVIMLALPVLLPVMAVLAAAVRLEGG CCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC GPVFYSQPRIGRWGRHFRIIKFRTMVCNADTVLQQHLAQHPELAEEWAENQKLRCDPRIT CCEEECCCCCCCCCCCEEEEEEEEEHCCHHHHHHHHHHCCCHHHHHHHCCCCEECCCCHH AIGGFLRRTSLDELPQLLNVLRGEMSLVGPRPIVDAEVPRYGEAFELYKRTLPGISGLWQ HHHHHHHHCCHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE ISGRNDTTYEERVMLDTYYSRNWSVWMDLHVLSRTLWVVIKRSGAY ECCCCCCCHHHHEEEEHHHCCCCEEEEHHHHHHHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7596293 [H]