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The map label for this gene is 78355527

Identifier: 78355527

GI number: 78355527

Start: 488911

End: 490269

Strand: Direct

Name: 78355527

Synonym: Dde_0480

Alternate gene names: NA

Gene position: 488911-490269 (Clockwise)

Preceding gene: 78355525

Following gene: 78355528

Centisome position: 13.11

GC content: 58.2

Gene sequence:

>1359_bases
ATGCAAGAAACTGGTTCCTTTGGTGAACAGTATGGCCGCTCTGGCACGCAAACGGTGGCACGCGCTGCCGCTTTTTCCGC
GTCTGCCCTGCGCCGGCTGAAAGTCTGGCTCGGGCAGGAAAAGATTGTGGCGCAATCGTATGCCCTGCTGCGTGTTGTTT
TTTTTGCCGGTTGTCTGCTTTCTCCGCTGGGCAAGGCGTTTCAGGTGGGTGCCGGTGTTGCCGGACTTGTTCTGCTGGCG
GCGTATTACACCGGCGGGTATGCCCGTTCCAATCTGGCCCGTCTGCCGTTCCGCTGGATTTTCGCCGTTTTTTTTCTCTA
CCCGTTTGCGGCGACGATTTTTTCGCAGTGGCCGGGGCACAGCTTCGGATATACAAAACATATTCTGCATGAATCATTTC
CTTTGTTTTTTATGGGATTGGAATGCATCAGGTCGCCCCGTGACATGCGCACGGCGGGTGTGTGTCTGCTGCTGGCAGTA
TTCGGGCAGGGGGCCGACGGCATGTGGCAGTTCGTGACGGGGTACGATCTGATTAACGGTACCCCCGTAACTGTTGACGG
CAGGCTGACAGGATCCATGGGGACATACCGCGTGGGCAATTATCTGGCCATCGCCATGGTGCCGGCACTGCTCACGTTCT
GGGCTCTGCCCCGAAGCCTGTCCGTCCGGTGGCGCAGCCTGTTTGTGGCCGCTGTTTCCGTCCCTCCGTTTTTTGTGCTG
GTCATGTCGCAGACGCGCAGCGCCATGCTGGGGCTTGCCGGTGCGTTATACTGCTATGCCGTGCTCTGTCTGCGTGTGCA
CCGCAGGCTGCTGATGGTGCCGCCTGTGCTGCTCGGTATTCTGCTGCTGGCAGGGCCGGACAGAATCCGTCTGTCCACCG
CGCTGCGTGACGGCCGCTGGGAGCTGTGGGAAGCGGCATGGCGTATCTTCCGCGAGCATATGTGGTTCGGCACGGGAGCA
AGCACTTTCAATCCGGCGTTTAACAGCATGGGCATAACGCTTGTCATCAATGACAACACCATTCCGCATCCGCATGGTAT
TTTTGTACAGTTTCTTTCAGATGGCGGCATTGCGGGTTTTCTGCTGCTTGCCGGTGTTCTGGCGGGTATAGGTTTTATCT
GGTGCGGCATCCGGGTATGGAAAGGTGTCCGTGCGGCAGACGTGGATGAAATCCGCTACTGGCGTATGGCCGGTCTGTTG
TGGGCGGGGTTTGCCGCATATCTCGGAACCGGTGTGTTCGGCCATAATTTTTACCGGACATGGTGGCTTGCCATGGGACT
TATGATGTTTGGGTGTATCATGGGAGCGGTGGTTTCCGCCGGCAGGTGCACCCGCGGGGAGGCTGTGCCCCATGAATGA

Upstream 100 bases:

>100_bases
ATATATACCGGTTGTGAACAAGGGCGTCTAGTGTTCGCTGTACAAGATTTCTTATAAATGTTAGTGGGCTGAACGCTAAC
CCCGACTGTTGGAGTCTTCG

Downstream 100 bases:

>100_bases
GGGATGTACGCTGCAGGGCGGTTGCCGGCTGATGACTTCCGGCATGCGTATGACGCTGCTGATGCTGGCATCGGATATCT
TTGCACTGGTCTGCGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: Lipid A Core-O-Antigen Ligase-Like Protein; Lipid A Core-O-Antigen Ligase And Related S

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MQETGSFGEQYGRSGTQTVARAAAFSASALRRLKVWLGQEKIVAQSYALLRVVFFAGCLLSPLGKAFQVGAGVAGLVLLA
AYYTGGYARSNLARLPFRWIFAVFFLYPFAATIFSQWPGHSFGYTKHILHESFPLFFMGLECIRSPRDMRTAGVCLLLAV
FGQGADGMWQFVTGYDLINGTPVTVDGRLTGSMGTYRVGNYLAIAMVPALLTFWALPRSLSVRWRSLFVAAVSVPPFFVL
VMSQTRSAMLGLAGALYCYAVLCLRVHRRLLMVPPVLLGILLLAGPDRIRLSTALRDGRWELWEAAWRIFREHMWFGTGA
STFNPAFNSMGITLVINDNTIPHPHGIFVQFLSDGGIAGFLLLAGVLAGIGFIWCGIRVWKGVRAADVDEIRYWRMAGLL
WAGFAAYLGTGVFGHNFYRTWWLAMGLMMFGCIMGAVVSAGRCTRGEAVPHE

Sequences:

>Translated_452_residues
MQETGSFGEQYGRSGTQTVARAAAFSASALRRLKVWLGQEKIVAQSYALLRVVFFAGCLLSPLGKAFQVGAGVAGLVLLA
AYYTGGYARSNLARLPFRWIFAVFFLYPFAATIFSQWPGHSFGYTKHILHESFPLFFMGLECIRSPRDMRTAGVCLLLAV
FGQGADGMWQFVTGYDLINGTPVTVDGRLTGSMGTYRVGNYLAIAMVPALLTFWALPRSLSVRWRSLFVAAVSVPPFFVL
VMSQTRSAMLGLAGALYCYAVLCLRVHRRLLMVPPVLLGILLLAGPDRIRLSTALRDGRWELWEAAWRIFREHMWFGTGA
STFNPAFNSMGITLVINDNTIPHPHGIFVQFLSDGGIAGFLLLAGVLAGIGFIWCGIRVWKGVRAADVDEIRYWRMAGLL
WAGFAAYLGTGVFGHNFYRTWWLAMGLMMFGCIMGAVVSAGRCTRGEAVPHE
>Mature_452_residues
MQETGSFGEQYGRSGTQTVARAAAFSASALRRLKVWLGQEKIVAQSYALLRVVFFAGCLLSPLGKAFQVGAGVAGLVLLA
AYYTGGYARSNLARLPFRWIFAVFFLYPFAATIFSQWPGHSFGYTKHILHESFPLFFMGLECIRSPRDMRTAGVCLLLAV
FGQGADGMWQFVTGYDLINGTPVTVDGRLTGSMGTYRVGNYLAIAMVPALLTFWALPRSLSVRWRSLFVAAVSVPPFFVL
VMSQTRSAMLGLAGALYCYAVLCLRVHRRLLMVPPVLLGILLLAGPDRIRLSTALRDGRWELWEAAWRIFREHMWFGTGA
STFNPAFNSMGITLVINDNTIPHPHGIFVQFLSDGGIAGFLLLAGVLAGIGFIWCGIRVWKGVRAADVDEIRYWRMAGLL
WAGFAAYLGTGVFGHNFYRTWWLAMGLMMFGCIMGAVVSAGRCTRGEAVPHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49772; Mature: 49772

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA