| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355511
Identifier: 78355511
GI number: 78355511
Start: 474811
End: 475122
Strand: Direct
Name: 78355511
Synonym: Dde_0464
Alternate gene names: NA
Gene position: 474811-475122 (Clockwise)
Preceding gene: 78355510
Following gene: 78355512
Centisome position: 12.73
GC content: 56.73
Gene sequence:
>312_bases ATGAGTTTGCAGACTGTGGCGCCGGGCGATCTTGATGCCCGCATAGAACAGACCGCGCAGGGTATTGTGCTGTTTCACAA GGAACTGTGCCCGCATTGCAAGAATATGGAAAAAGTGCTGGCCAAATTCGGCGCCAAAAATCCCGATGTGGAACTGCTGG CCGTGGACAGCGAAGCAGACCCCGCGGTGATGGAAGCCTACGGCGTGGAGCGTGTGCCGTCGCTGGTCATCGTGCGCGGG GGGCGGGCCGTGTATACCCGCACCGGTCTTATGAATCCTAAGGAACTGACAACACTGTATCATTCAGTATAG
Upstream 100 bases:
>100_bases TGCATAAATAACGGACCGCTGCGGCGGTTTTTTTCTCACGCAGGGGCGGGCTGCATTGCCCGGCACCTGCCGTGCGGAAC ATGACGGCAAGGAGCTGTAT
Downstream 100 bases:
>100_bases CGCCGCGGCGCGGGGAGTACGGCTGAGCACCATGGAAACCAGACAGGTTGATGTGCTTATACTGGGCGGCGGGGTGGCCG GCATGACCGCCGCCGTTTAC
Product: thioredoxin
Products: NA
Alternate protein names: Thioredoxin Domain Protein
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSLQTVAPGDLDARIEQTAQGIVLFHKELCPHCKNMEKVLAKFGAKNPDVELLAVDSEADPAVMEAYGVERVPSLVIVRG GRAVYTRTGLMNPKELTTLYHSV
Sequences:
>Translated_103_residues MSLQTVAPGDLDARIEQTAQGIVLFHKELCPHCKNMEKVLAKFGAKNPDVELLAVDSEADPAVMEAYGVERVPSLVIVRG GRAVYTRTGLMNPKELTTLYHSV >Mature_102_residues SLQTVAPGDLDARIEQTAQGIVLFHKELCPHCKNMEKVLAKFGAKNPDVELLAVDSEADPAVMEAYGVERVPSLVIVRGG RAVYTRTGLMNPKELTTLYHSV
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11251; Mature: 11120
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQTVAPGDLDARIEQTAQGIVLFHKELCPHCKNMEKVLAKFGAKNPDVELLAVDSEAD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCCC PAVMEAYGVERVPSLVIVRGGRAVYTRTGLMNPKELTTLYHSV CHHHHHHCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHCC >Mature Secondary Structure SLQTVAPGDLDARIEQTAQGIVLFHKELCPHCKNMEKVLAKFGAKNPDVELLAVDSEAD CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCCC PAVMEAYGVERVPSLVIVRGGRAVYTRTGLMNPKELTTLYHSV CHHHHHHCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA