Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is corA [H]
Identifier: 78355483
GI number: 78355483
Start: 442430
End: 443494
Strand: Direct
Name: corA [H]
Synonym: Dde_0436
Alternate gene names: 78355483
Gene position: 442430-443494 (Clockwise)
Preceding gene: 78355482
Following gene: 78355485
Centisome position: 11.86
GC content: 57.37
Gene sequence:
>1065_bases ATGGCCCGTTTTCTGAAAAAGATGGACACAAGGGCGGGGCGTCCGCCGGGTGCTCTGGTTTTTGTAGGCAGACAGAAAAT AGATACGCCGCGTCTGCGTGTCATCGAATACGATGCGGACATGGCACGCGACGATTTTGTGCAGCACCCCGGTCAGCTTG CCGGCCGTACGCGGCCCGATACCGTGCTGTGGTGCAACGTGGACGGCGTGCACGATGCCGGACTGATGGAAACGCTGGGC GGGCTGTTCGGCATACCGGCGCTGGTGCTTGAAGACATCATGAACACAGGTCAGCGCCCCAAGCTTGAAGAGTTTCCCGG CATTGTCTTTGTTTCCATCAAAATGCCTTCACTCAGTCAGGACCGTTCGGCAGTGACGACAGACCAGTTGAGTGCCGTGC TCAGCGACGGCTGTCTGCTTACTTTTCAGGAACGTCCGGGAATGGTTTTTGAGCCGGTGCGCGAGCGGTTGAAAGGGCAG ACAGGAAGACTGCGGCGGTACGGGCCGGATTATCTGCTGTACGCGCTGCTGGATTGCGTGTTTGAGGGGTATCTGAAAAC CATTGAGGCACTGGGCGAGCGCATAGAAGAGCTGGACGACGAAATTTTTGAAGACCCCACGCCTGAACTGCTGCAGGAGA TAACGCATTATCGCCGCGAGATGGCCTACATACGCAAGGCGGTGCGCCCCGCGAGGGAAATCGCGTTGCGCATGGCGCGG GTGGAAAACGGCCTTGTGGGCGAGGGCATTCAGCCTTTTCTGCGCGACCTTGCCGATATGGCCGAGATGACCGCCGATGC CGTGGAGGTGTACCGCGAACTGCTGAACGACCATCAGAACAGTTATAACATGGCGGTGGGCAACAGACTGAACGACATCA TGAAGTTTCTGACCATTTTTTCCACGGTATTCATTCCGCTGTCGTTTCTTGCCGGTGTGTACGGAATGAACTTTGACGTG ATGCCCGAACTGCACGTGGAGTATGCCTATTTTGTGCTGCTGGGCGTTATGGTGGCTGTCGCGGGGGGCATGCTGGTGTA TTTCCGCTGGCGCCGCTGGCTGTGA
Upstream 100 bases:
>100_bases CCGCGCGGACTGTTTTTTTCTGCATCGTTGTGTATGCTGAAGGGCACAGGCGCAGGCACACCCGCACGGTGAACACCGGC GGCCCTGCCACGGAGGAATC
Downstream 100 bases:
>100_bases CACTGCACGCCGCAGCATGCCGCCGCGGTGCATGACAGTGGCAGGGACAGCACGGACGCAGTCTGCCGGAACCGCTCCGG CAGGCAGACTGCCGCCTGAA
Product: magnesium and cobalt transport protein CorA
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MARFLKKMDTRAGRPPGALVFVGRQKIDTPRLRVIEYDADMARDDFVQHPGQLAGRTRPDTVLWCNVDGVHDAGLMETLG GLFGIPALVLEDIMNTGQRPKLEEFPGIVFVSIKMPSLSQDRSAVTTDQLSAVLSDGCLLTFQERPGMVFEPVRERLKGQ TGRLRRYGPDYLLYALLDCVFEGYLKTIEALGERIEELDDEIFEDPTPELLQEITHYRREMAYIRKAVRPAREIALRMAR VENGLVGEGIQPFLRDLADMAEMTADAVEVYRELLNDHQNSYNMAVGNRLNDIMKFLTIFSTVFIPLSFLAGVYGMNFDV MPELHVEYAYFVLLGVMVAVAGGMLVYFRWRRWL
Sequences:
>Translated_354_residues MARFLKKMDTRAGRPPGALVFVGRQKIDTPRLRVIEYDADMARDDFVQHPGQLAGRTRPDTVLWCNVDGVHDAGLMETLG GLFGIPALVLEDIMNTGQRPKLEEFPGIVFVSIKMPSLSQDRSAVTTDQLSAVLSDGCLLTFQERPGMVFEPVRERLKGQ TGRLRRYGPDYLLYALLDCVFEGYLKTIEALGERIEELDDEIFEDPTPELLQEITHYRREMAYIRKAVRPAREIALRMAR VENGLVGEGIQPFLRDLADMAEMTADAVEVYRELLNDHQNSYNMAVGNRLNDIMKFLTIFSTVFIPLSFLAGVYGMNFDV MPELHVEYAYFVLLGVMVAVAGGMLVYFRWRRWL >Mature_353_residues ARFLKKMDTRAGRPPGALVFVGRQKIDTPRLRVIEYDADMARDDFVQHPGQLAGRTRPDTVLWCNVDGVHDAGLMETLGG LFGIPALVLEDIMNTGQRPKLEEFPGIVFVSIKMPSLSQDRSAVTTDQLSAVLSDGCLLTFQERPGMVFEPVRERLKGQT GRLRRYGPDYLLYALLDCVFEGYLKTIEALGERIEELDDEIFEDPTPELLQEITHYRREMAYIRKAVRPAREIALRMARV ENGLVGEGIQPFLRDLADMAEMTADAVEVYRELLNDHQNSYNMAVGNRLNDIMKFLTIFSTVFIPLSFLAGVYGMNFDVM PELHVEYAYFVLLGVMVAVAGGMLVYFRWRRWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 40256; Mature: 40125
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFLKKMDTRAGRPPGALVFVGRQKIDTPRLRVIEYDADMARDDFVQHPGQLAGRTRPD CHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCHHHCCCCCCC TVLWCNVDGVHDAGLMETLGGLFGIPALVLEDIMNTGQRPKLEEFPGIVFVSIKMPSLSQ EEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHCCCEEEEEEECCCCCC DRSAVTTDQLSAVLSDGCLLTFQERPGMVFEPVRERLKGQTGRLRRYGPDYLLYALLDCV CCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHH FEGYLKTIEALGERIEELDDEIFEDPTPELLQEITHYRREMAYIRKAVRPAREIALRMAR HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VENGLVGEGIQPFLRDLADMAEMTADAVEVYRELLNDHQNSYNMAVGNRLNDIMKFLTIF HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH STVFIPLSFLAGVYGMNFDVMPELHVEYAYFVLLGVMVAVAGGMLVYFRWRRWL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARFLKKMDTRAGRPPGALVFVGRQKIDTPRLRVIEYDADMARDDFVQHPGQLAGRTRPD HHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCHHHCCCCCCC TVLWCNVDGVHDAGLMETLGGLFGIPALVLEDIMNTGQRPKLEEFPGIVFVSIKMPSLSQ EEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHCCCEEEEEEECCCCCC DRSAVTTDQLSAVLSDGCLLTFQERPGMVFEPVRERLKGQTGRLRRYGPDYLLYALLDCV CCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHH FEGYLKTIEALGERIEELDDEIFEDPTPELLQEITHYRREMAYIRKAVRPAREIALRMAR HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VENGLVGEGIQPFLRDLADMAEMTADAVEVYRELLNDHQNSYNMAVGNRLNDIMKFLTIF HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH STVFIPLSFLAGVYGMNFDVMPELHVEYAYFVLLGVMVAVAGGMLVYFRWRRWL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]