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The map label for this gene is glpD [H]

Identifier: 78355455

GI number: 78355455

Start: 402492

End: 404129

Strand: Direct

Name: glpD [H]

Synonym: Dde_0408

Alternate gene names: 78355455

Gene position: 402492-404129 (Clockwise)

Preceding gene: 78355454

Following gene: 78355456

Centisome position: 10.79

GC content: 60.5

Gene sequence:

>1638_bases
ATGAAAAGAGAAGAATTACTGGACCGCCTGAAGGCCGATAAGGAATTCGACCTGCTTGTTGTCGGCGGCGGAGCCACCGG
CTGCGGCGTTGCGCTGGACGCAGCCACCCGCGGACTGGATGTGGCGCTGGTGGAACGGGCTGACTTTGCCGAGGGGACAA
GCAGCAAAAGTACAAAGCTGGTGCACGGCGGCGTACGCTATCTTGAAAAGGCTGTGCTCAAGCTGGATAAGGAACAGTTT
GATCTGGTGCGCGAAGGGCTGAAGGAACGCGGGCTGCTGTTGAAGAACGCTCCTCATCTGGCGCATCCGCTGCGGCTTAT
CACACCGGTGCACACGGCACGCGAGGCCGGGTACATGTATGCCGGACTGGTGATGTATGACCTGCTGGCCGGCAGGCTGG
GGCTGGGGCGCAGCAGGCTTGTGACGCGTAAAAAGGCGCAGCAGCTTTTTCCCACGCTTAATCTGGATGGCTACAAGGCG
GCGGTCATATATTATGACGGTCAGTTCAATGATGCCCGTATGGCCGTGACTCTGGCCCGTACGGCCAACCTGCACGGTGC
CACCTGCGCCAACCATGTGGAAGTGACCGCCCTTGTGCGCGAGCACGGTAAAATACGCGGAGCCGTGGTGCGCGATAACC
TGACAGGTGACGAATGGACCATCAGGGCGCGCGGTGTGGTCAATGCCACCGGCCCCATGGCAGACAGGCTCAGACATATG
GACGACACCCGGCTGCCCGATATCCTTAAAGTGAGCTCGGGTATCCACATCATGCTGGATGCCGGATTCACTCCCCCCGA
TCTTTCATTGATGATTCCCAGAACAGAGGACGGGCGTGTGCTCTTTATGATTCCGTGGATGGGACATGTGGTGTTCGGCA
CCACAGATGAACCCGCCACGCCGGAATACAGCCCGGTACCCGTTGAAAAGGATGTGGAATACCTGCTGGAATATGCGCGC
AGATATCTGAACCGCCCCGTGGACCGCAGTGATGTGCTTTCCGTGTGGAGCGGGCTGCGGCCGCTGGTGTTTGCATCGGG
CAAATCAAGCACGCAGGAACTGGCCCGTACGCATGTCATCGAGGTATCACCCGGCGGGCTGCTGACCATTACCGGCGGCA
AGTGGACCAGCTACCGGCGTATGGCCGAAGACACCGTGGACAGGGCCGATTCGCTGTTCGGTTTCAATCTGCGGCGTCCG
TGCGTGACGGAAAAGCTGAAGGTGCTGGGATCACGCGGGTATGTGCCCGGCGCCCATGCCGAACTGGCCCGAGAATACGC
GGTGTCAGAAGAGCTGGCAGCAGCGCTGTACACCACATACGGCGATGAAGCCTGCGCGGTGCTGCAGGTGGCCCGCGAAA
CTGGATTCACCGAACCTCTGCATCCCGACCACCCGTATATCGGGGCGGAGGTTGTGTATCAGGTGCGGCACGAAATGGCC
TCGCATGTGAGCGATGTGCTGGTGCGGCGCCTGCCGTTGGGACTTGTGAATATTGCCCATGCCGTCGAAGTCGCCCCCGT
TGTGGCGGAAATCATGGGCAGCGAGCTGAGTTGGGACCCGGCCCGGTGCAAGGAGGAATCGGATGCCGCCATAGCCATGC
TGCACAGCTGGCATATGCCGCAGGGCAGCGAAGGGTAG

Upstream 100 bases:

>100_bases
CCATCCTCAGAGCTGCTCTGGTGGGCGGCTTTGCAGATGTGCTTGTGACGGACGAAACCACGGCAGGGACGCTGCTTATG
GCAGAAACCGGAGGTGAATC

Downstream 100 bases:

>100_bases
CAACGGGGATTGTATCTGTGACTCGGAAAATGCGGCGCAATGGGCGGCGCACCAACATGACTCAAGGATTGCGGAGGATG
TATGAAGGAACTGTCTCTGG

Product: glycerol-3-phosphate dehydrogenase, FAD-dependent

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MKREELLDRLKADKEFDLLVVGGGATGCGVALDAATRGLDVALVERADFAEGTSSKSTKLVHGGVRYLEKAVLKLDKEQF
DLVREGLKERGLLLKNAPHLAHPLRLITPVHTAREAGYMYAGLVMYDLLAGRLGLGRSRLVTRKKAQQLFPTLNLDGYKA
AVIYYDGQFNDARMAVTLARTANLHGATCANHVEVTALVREHGKIRGAVVRDNLTGDEWTIRARGVVNATGPMADRLRHM
DDTRLPDILKVSSGIHIMLDAGFTPPDLSLMIPRTEDGRVLFMIPWMGHVVFGTTDEPATPEYSPVPVEKDVEYLLEYAR
RYLNRPVDRSDVLSVWSGLRPLVFASGKSSTQELARTHVIEVSPGGLLTITGGKWTSYRRMAEDTVDRADSLFGFNLRRP
CVTEKLKVLGSRGYVPGAHAELAREYAVSEELAAALYTTYGDEACAVLQVARETGFTEPLHPDHPYIGAEVVYQVRHEMA
SHVSDVLVRRLPLGLVNIAHAVEVAPVVAEIMGSELSWDPARCKEESDAAIAMLHSWHMPQGSEG

Sequences:

>Translated_545_residues
MKREELLDRLKADKEFDLLVVGGGATGCGVALDAATRGLDVALVERADFAEGTSSKSTKLVHGGVRYLEKAVLKLDKEQF
DLVREGLKERGLLLKNAPHLAHPLRLITPVHTAREAGYMYAGLVMYDLLAGRLGLGRSRLVTRKKAQQLFPTLNLDGYKA
AVIYYDGQFNDARMAVTLARTANLHGATCANHVEVTALVREHGKIRGAVVRDNLTGDEWTIRARGVVNATGPMADRLRHM
DDTRLPDILKVSSGIHIMLDAGFTPPDLSLMIPRTEDGRVLFMIPWMGHVVFGTTDEPATPEYSPVPVEKDVEYLLEYAR
RYLNRPVDRSDVLSVWSGLRPLVFASGKSSTQELARTHVIEVSPGGLLTITGGKWTSYRRMAEDTVDRADSLFGFNLRRP
CVTEKLKVLGSRGYVPGAHAELAREYAVSEELAAALYTTYGDEACAVLQVARETGFTEPLHPDHPYIGAEVVYQVRHEMA
SHVSDVLVRRLPLGLVNIAHAVEVAPVVAEIMGSELSWDPARCKEESDAAIAMLHSWHMPQGSEG
>Mature_545_residues
MKREELLDRLKADKEFDLLVVGGGATGCGVALDAATRGLDVALVERADFAEGTSSKSTKLVHGGVRYLEKAVLKLDKEQF
DLVREGLKERGLLLKNAPHLAHPLRLITPVHTAREAGYMYAGLVMYDLLAGRLGLGRSRLVTRKKAQQLFPTLNLDGYKA
AVIYYDGQFNDARMAVTLARTANLHGATCANHVEVTALVREHGKIRGAVVRDNLTGDEWTIRARGVVNATGPMADRLRHM
DDTRLPDILKVSSGIHIMLDAGFTPPDLSLMIPRTEDGRVLFMIPWMGHVVFGTTDEPATPEYSPVPVEKDVEYLLEYAR
RYLNRPVDRSDVLSVWSGLRPLVFASGKSSTQELARTHVIEVSPGGLLTITGGKWTSYRRMAEDTVDRADSLFGFNLRRP
CVTEKLKVLGSRGYVPGAHAELAREYAVSEELAAALYTTYGDEACAVLQVARETGFTEPLHPDHPYIGAEVVYQVRHEMA
SHVSDVLVRRLPLGLVNIAHAVEVAPVVAEIMGSELSWDPARCKEESDAAIAMLHSWHMPQGSEG

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=547, Percent_Identity=43.8756855575868, Blast_Score=452, Evalue=1e-127,
Organism=Homo sapiens, GI285002231, Length=547, Percent_Identity=43.8756855575868, Blast_Score=452, Evalue=1e-127,
Organism=Escherichia coli, GI2367226, Length=497, Percent_Identity=30.9859154929577, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1788574, Length=401, Percent_Identity=27.431421446384, Blast_Score=92, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17509253, Length=538, Percent_Identity=46.0966542750929, Blast_Score=442, Evalue=1e-124,
Organism=Caenorhabditis elegans, GI115534726, Length=528, Percent_Identity=40.9090909090909, Blast_Score=411, Evalue=1e-115,
Organism=Saccharomyces cerevisiae, GI6322036, Length=596, Percent_Identity=38.255033557047, Blast_Score=382, Evalue=1e-107,
Organism=Drosophila melanogaster, GI161077125, Length=531, Percent_Identity=45.7627118644068, Blast_Score=450, Evalue=1e-126,
Organism=Drosophila melanogaster, GI24653942, Length=531, Percent_Identity=45.7627118644068, Blast_Score=450, Evalue=1e-126,
Organism=Drosophila melanogaster, GI24653944, Length=531, Percent_Identity=45.7627118644068, Blast_Score=450, Evalue=1e-126,
Organism=Drosophila melanogaster, GI20130025, Length=531, Percent_Identity=45.7627118644068, Blast_Score=450, Evalue=1e-126,
Organism=Drosophila melanogaster, GI24586295, Length=532, Percent_Identity=38.5338345864662, Blast_Score=335, Evalue=4e-92,
Organism=Drosophila melanogaster, GI19921278, Length=545, Percent_Identity=34.4954128440367, Blast_Score=289, Evalue=3e-78,
Organism=Drosophila melanogaster, GI45550977, Length=398, Percent_Identity=32.6633165829146, Blast_Score=207, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 59930; Mature: 59930

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00977 FAD_G3PDH_1 ; PS00978 FAD_G3PDH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKREELLDRLKADKEFDLLVVGGGATGCGVALDAATRGLDVALVERADFAEGTSSKSTKL
CCHHHHHHHHCCCCCCEEEEECCCCCCCCEEHHHHHCCCEEEEEECCCCCCCCCCCCCHH
VHGGVRYLEKAVLKLDKEQFDLVREGLKERGLLLKNAPHLAHPLRLITPVHTAREAGYMY
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCHHCCHHHHHHHHHHHHCCHHH
AGLVMYDLLAGRLGLGRSRLVTRKKAQQLFPTLNLDGYKAAVIYYDGQFNDARMAVTLAR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEH
TANLHGATCANHVEVTALVREHGKIRGAVVRDNLTGDEWTIRARGVVNATGPMADRLRHM
HCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCEEECCCHHHHHHHHC
DDTRLPDILKVSSGIHIMLDAGFTPPDLSLMIPRTEDGRVLFMIPWMGHVVFGTTDEPAT
CCCCCCHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCEEEECCCCCCCC
PEYSPVPVEKDVEYLLEYARRYLNRPVDRSDVLSVWSGLRPLVFASGKSSTQELARTHVI
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHEEE
EVSPGGLLTITGGKWTSYRRMAEDTVDRADSLFGFNLRRPCVTEKLKVLGSRGYVPGAHA
EECCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHH
ELAREYAVSEELAAALYTTYGDEACAVLQVARETGFTEPLHPDHPYIGAEVVYQVRHEMA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
SHVSDVLVRRLPLGLVNIAHAVEVAPVVAEIMGSELSWDPARCKEESDAAIAMLHSWHMP
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHCCCC
QGSEG
CCCCC
>Mature Secondary Structure
MKREELLDRLKADKEFDLLVVGGGATGCGVALDAATRGLDVALVERADFAEGTSSKSTKL
CCHHHHHHHHCCCCCCEEEEECCCCCCCCEEHHHHHCCCEEEEEECCCCCCCCCCCCCHH
VHGGVRYLEKAVLKLDKEQFDLVREGLKERGLLLKNAPHLAHPLRLITPVHTAREAGYMY
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCHHCCHHHHHHHHHHHHCCHHH
AGLVMYDLLAGRLGLGRSRLVTRKKAQQLFPTLNLDGYKAAVIYYDGQFNDARMAVTLAR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEH
TANLHGATCANHVEVTALVREHGKIRGAVVRDNLTGDEWTIRARGVVNATGPMADRLRHM
HCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCEEECCCHHHHHHHHC
DDTRLPDILKVSSGIHIMLDAGFTPPDLSLMIPRTEDGRVLFMIPWMGHVVFGTTDEPAT
CCCCCCHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCEEEECCCCCCCC
PEYSPVPVEKDVEYLLEYARRYLNRPVDRSDVLSVWSGLRPLVFASGKSSTQELARTHVI
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHEEE
EVSPGGLLTITGGKWTSYRRMAEDTVDRADSLFGFNLRRPCVTEKLKVLGSRGYVPGAHA
EECCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHH
ELAREYAVSEELAAALYTTYGDEACAVLQVARETGFTEPLHPDHPYIGAEVVYQVRHEMA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
SHVSDVLVRRLPLGLVNIAHAVEVAPVVAEIMGSELSWDPARCKEESDAAIAMLHSWHMP
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHCCCC
QGSEG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA