Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78355435
Identifier: 78355435
GI number: 78355435
Start: 382048
End: 382929
Strand: Direct
Name: 78355435
Synonym: Dde_0388
Alternate gene names: NA
Gene position: 382048-382929 (Clockwise)
Preceding gene: 78355434
Following gene: 78355436
Centisome position: 10.24
GC content: 65.99
Gene sequence:
>882_bases ATGGTGCGTATCGGACAATACGGAGGCCGCGGGGGTAGTGGCGGCGCCGGCGCGCGCGGAGGCAGAGCCGCTGTCTTCCG TCAGGGGCGTCGTGTGGGTGACCGGCTGTGCGGGACGGTTGTTTCCGCCGCGGACGGCGGCCATGCCTGGGTCGAGGTGG ACGGACAGCGCCTGCTGGCGCGTCTGGAAGTGGCGGCCGCGCCGGGCGATACCCTGGAATTTGTCATAACCAGCCTGCAT CCTGAAATAGTGCTGCGCACGATACAGGGCCGGGCCGGAGGACAGGGCGGCGGGGCAGGCGACAGCGAGCTGGCGGCACG GTACAGGGCGGCGCGTGATGCGTTCTGGCTGCGCTTGCGCGAAACGGAAACGGCTGATACGCAGCCCTGCGCGCAGAAGG ATTCCCGCGATCTGTTCCGTGACAGGCTGTGCCGGTTTCCGGAACTGACACTGGCTTTTATGGAGGCGGTCCACGCACTG AGCGCTGTCCGTGCTTTGCCCGTCATGCGGCAGGGAGCGCTGTGGTTGGCGCCGTGGCGGCTGCCCCGTGCTGATGCGGT GGAAATTTTTGTGTACGGAACACAGGCGCCTTCTGCTGCCATGACCAGAATGCTGGCCGCTTTCAGACCGGCGGGTTTTT CTTCCGGTGCGGGGCAGGTACTGGCGGACGTGCGCGCCGGTGGCGGGCTTGTTTCGTTTAAACTGTATGCGGAGCATCCG TCCGTGCTGGGTCATGTGGATATGGTGGCGCTTACGGGCGGATTTGCCGCCGAAGCCCGCTGCATCGGGGTGGAACGCCT GACATTTTTTCCGGGGGACGTCCCCGCTTTTCTGATGCAGGGCGGCAATGCGGGCTATACTGCCCCGCGGGGCCGCATCT GA
Upstream 100 bases:
>100_bases TCAGGCGGTGATGATGCAGTTTTTGCAGCGGCGCAAGCCGCTTTTTTTTACCGGCATGATGCTGCGCCCGCCGCGCGGCT GATGACGCGGAGAGAAGCGC
Downstream 100 bases:
>100_bases TATTTTGTGGAATGAACATGATGAAGGTTTCCCGCGAGTCTTGTTTTGATGCGGCATCAGTGGTGCCCGGCGTGCCATCC GGTTTTGCACAGCCCGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MVRIGQYGGRGGSGGAGARGGRAAVFRQGRRVGDRLCGTVVSAADGGHAWVEVDGQRLLARLEVAAAPGDTLEFVITSLH PEIVLRTIQGRAGGQGGGAGDSELAARYRAARDAFWLRLRETETADTQPCAQKDSRDLFRDRLCRFPELTLAFMEAVHAL SAVRALPVMRQGALWLAPWRLPRADAVEIFVYGTQAPSAAMTRMLAAFRPAGFSSGAGQVLADVRAGGGLVSFKLYAEHP SVLGHVDMVALTGGFAAEARCIGVERLTFFPGDVPAFLMQGGNAGYTAPRGRI
Sequences:
>Translated_293_residues MVRIGQYGGRGGSGGAGARGGRAAVFRQGRRVGDRLCGTVVSAADGGHAWVEVDGQRLLARLEVAAAPGDTLEFVITSLH PEIVLRTIQGRAGGQGGGAGDSELAARYRAARDAFWLRLRETETADTQPCAQKDSRDLFRDRLCRFPELTLAFMEAVHAL SAVRALPVMRQGALWLAPWRLPRADAVEIFVYGTQAPSAAMTRMLAAFRPAGFSSGAGQVLADVRAGGGLVSFKLYAEHP SVLGHVDMVALTGGFAAEARCIGVERLTFFPGDVPAFLMQGGNAGYTAPRGRI >Mature_293_residues MVRIGQYGGRGGSGGAGARGGRAAVFRQGRRVGDRLCGTVVSAADGGHAWVEVDGQRLLARLEVAAAPGDTLEFVITSLH PEIVLRTIQGRAGGQGGGAGDSELAARYRAARDAFWLRLRETETADTQPCAQKDSRDLFRDRLCRFPELTLAFMEAVHAL SAVRALPVMRQGALWLAPWRLPRADAVEIFVYGTQAPSAAMTRMLAAFRPAGFSSGAGQVLADVRAGGGLVSFKLYAEHP SVLGHVDMVALTGGFAAEARCIGVERLTFFPGDVPAFLMQGGNAGYTAPRGRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30995; Mature: 30995
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRIGQYGGRGGSGGAGARGGRAAVFRQGRRVGDRLCGTVVSAADGGHAWVEVDGQRLLA CEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHH RLEVAAAPGDTLEFVITSLHPEIVLRTIQGRAGGQGGGAGDSELAARYRAARDAFWLRLR HHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEE ETETADTQPCAQKDSRDLFRDRLCRFPELTLAFMEAVHALSAVRALPVMRQGALWLAPWR CCCCCCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC LPRADAVEIFVYGTQAPSAAMTRMLAAFRPAGFSSGAGQVLADVRAGGGLVSFKLYAEHP CCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCC SVLGHVDMVALTGGFAAEARCIGVERLTFFPGDVPAFLMQGGNAGYTAPRGRI CHHHHHEEEEEECCCHHCEEEEEEEEEEECCCCCHHHHEECCCCCCCCCCCCC >Mature Secondary Structure MVRIGQYGGRGGSGGAGARGGRAAVFRQGRRVGDRLCGTVVSAADGGHAWVEVDGQRLLA CEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHH RLEVAAAPGDTLEFVITSLHPEIVLRTIQGRAGGQGGGAGDSELAARYRAARDAFWLRLR HHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEE ETETADTQPCAQKDSRDLFRDRLCRFPELTLAFMEAVHALSAVRALPVMRQGALWLAPWR CCCCCCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC LPRADAVEIFVYGTQAPSAAMTRMLAAFRPAGFSSGAGQVLADVRAGGGLVSFKLYAEHP CCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCC SVLGHVDMVALTGGFAAEARCIGVERLTFFPGDVPAFLMQGGNAGYTAPRGRI CHHHHHEEEEEECCCHHCEEEEEEEEEEECCCCCHHHHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA