Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
---|---|
Accession | NC_007519 |
Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78355428
Identifier: 78355428
GI number: 78355428
Start: 377175
End: 378263
Strand: Direct
Name: 78355428
Synonym: Dde_0381
Alternate gene names: NA
Gene position: 377175-378263 (Clockwise)
Preceding gene: 78355427
Following gene: 78355429
Centisome position: 10.11
GC content: 62.81
Gene sequence:
>1089_bases ATGCAGGTGAGAACATTCAAAGGCCCCAGCGCCAAAACAGTGCTGGATATGATCAAGGCGGAGATCGGCCCCGAGGCGGT CATTCTGTCGTCACGCGACTGTTCCGGTGACGGGGTCACATGGTGCGAAATGACCGTGGGGGTGGAGCGTGAAGCCGCAG CCGCACCCCGCATGGGCCGGGACGAACCCGCAGCCGGTGATCAAACGCCTCCGGCCGGATGGGATGAGTGGCACAGGGAA TGGGACGAGATAAAAGGGCACATCATGGCGTTGATGAAGCCCGCCCTGCGCCTTGACGAGCTTGCCCCCCGCCAGCGGGT GGCGCTGGAATATCTGGAACGCGAAGGCGTTGAGGATAATGTGATTCTGGCCCTGTACAGAAGGCTGCGCGGTGCGCCCT CGCTGTCTGTTCTTGAGCCGCTGTCCGCCGTGGTGCCGGTGAAAGGCTGGGGCGGGGCGGACTGGCCGCAGAAAATGCAG ATAGTATGCGGGCCTTCCGGCGTGGGTAAAACCAGTGCCGTGGTGCGCATGGCGCTGGCACTCCGGCGGCAGAATGCGGG GGTGCGCATCTGTGTGCTGAATGCGGACAGCCAGCGCGGCAGCGGCCGCATGGTGCTGCGCCATTATGCCGAACTGTGCG GCATGGGTTATCATGAAATTTCCGGCCCGGCAGACGCCGCGGCCTTGCTGGGTGAACTGGACGGATACGACAAGATTCTT GTGGATACTCCTGTTCCCGGACGCGGCGCAACGCTGCGCAGTCTGCTGGAAGAGACCGGTCTGGATGTGCTGGAGCAACA GGTGCCCGCAGCGGTGCAGCTGGTGATGTCGCCGCTGTACGGCGATGCCCAGATAAGTTTCTTTCTGCGGCAGTACGAGT GCGGACTGCCGTGCGGCCTTGTCTGGACGAAGCTGGACGAAGCCTGTAACTTCGGAGCGCTGATAAATGTTCCGGCGGCT TCGGGCCTGCCGGTGACGGCGCTTTCATTCGGTTCCGGCCTGAAGAATTCTCTGGCGTCCGCGCGCGGAACCATGATCTG GCGGCTGGTGTTTAAAAAACAGCTGCCGGGCGATGTGGCCGCACGCTGA
Upstream 100 bases:
>100_bases AGCTGCTCCAGAGGTTTCTGCCCACAGTTCCTGTTATTTCGCAGGCGGAAATTCCTGCTGACATACGGCTGACCGCCGTG GCAAACGTGGTGCTTGACTG
Downstream 100 bases:
>100_bases CGGCATTTTTCTGTAACGCTGATTTTTTGTGGCAGGCGAACGTGAACCTGTTGGAGCATAGCTGATGAGTGCTGAACTAC CTCTGGTTTTTTCCGTCACC
Product: flagellar biosynthesis protein FlhF
Products: NA
Alternate protein names: Flagellar Biosynthetic Protein FlhF; Flagellar Biosynthesis Regulator FlhF; Flagellar Biosynthetic Protein Flhf
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MQVRTFKGPSAKTVLDMIKAEIGPEAVILSSRDCSGDGVTWCEMTVGVEREAAAAPRMGRDEPAAGDQTPPAGWDEWHRE WDEIKGHIMALMKPALRLDELAPRQRVALEYLEREGVEDNVILALYRRLRGAPSLSVLEPLSAVVPVKGWGGADWPQKMQ IVCGPSGVGKTSAVVRMALALRRQNAGVRICVLNADSQRGSGRMVLRHYAELCGMGYHEISGPADAAALLGELDGYDKIL VDTPVPGRGATLRSLLEETGLDVLEQQVPAAVQLVMSPLYGDAQISFFLRQYECGLPCGLVWTKLDEACNFGALINVPAA SGLPVTALSFGSGLKNSLASARGTMIWRLVFKKQLPGDVAAR
Sequences:
>Translated_362_residues MQVRTFKGPSAKTVLDMIKAEIGPEAVILSSRDCSGDGVTWCEMTVGVEREAAAAPRMGRDEPAAGDQTPPAGWDEWHRE WDEIKGHIMALMKPALRLDELAPRQRVALEYLEREGVEDNVILALYRRLRGAPSLSVLEPLSAVVPVKGWGGADWPQKMQ IVCGPSGVGKTSAVVRMALALRRQNAGVRICVLNADSQRGSGRMVLRHYAELCGMGYHEISGPADAAALLGELDGYDKIL VDTPVPGRGATLRSLLEETGLDVLEQQVPAAVQLVMSPLYGDAQISFFLRQYECGLPCGLVWTKLDEACNFGALINVPAA SGLPVTALSFGSGLKNSLASARGTMIWRLVFKKQLPGDVAAR >Mature_362_residues MQVRTFKGPSAKTVLDMIKAEIGPEAVILSSRDCSGDGVTWCEMTVGVEREAAAAPRMGRDEPAAGDQTPPAGWDEWHRE WDEIKGHIMALMKPALRLDELAPRQRVALEYLEREGVEDNVILALYRRLRGAPSLSVLEPLSAVVPVKGWGGADWPQKMQ IVCGPSGVGKTSAVVRMALALRRQNAGVRICVLNADSQRGSGRMVLRHYAELCGMGYHEISGPADAAALLGELDGYDKIL VDTPVPGRGATLRSLLEETGLDVLEQQVPAAVQLVMSPLYGDAQISFFLRQYECGLPCGLVWTKLDEACNFGALINVPAA SGLPVTALSFGSGLKNSLASARGTMIWRLVFKKQLPGDVAAR
Specific function: Unknown
COG id: COG1419
COG function: function code N; Flagellar GTP-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39016; Mature: 39016
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVRTFKGPSAKTVLDMIKAEIGPEAVILSSRDCSGDGVTWCEMTVGVEREAAAAPRMGR CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCHHHHCCCCCCC DEPAAGDQTPPAGWDEWHREWDEIKGHIMALMKPALRLDELAPRQRVALEYLEREGVEDN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCH VILALYRRLRGAPSLSVLEPLSAVVPVKGWGGADWPQKMQIVCGPSGVGKTSAVVRMALA HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH LRRQNAGVRICVLNADSQRGSGRMVLRHYAELCGMGYHEISGPADAAALLGELDGYDKIL HHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCCCCCEEE VDTPVPGRGATLRSLLEETGLDVLEQQVPAAVQLVMSPLYGDAQISFFLRQYECGLPCGL EECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHH VWTKLDEACNFGALINVPAASGLPVTALSFGSGLKNSLASARGTMIWRLVFKKQLPGDVA HHHHHHHHCCCCCEEECCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHC AR CC >Mature Secondary Structure MQVRTFKGPSAKTVLDMIKAEIGPEAVILSSRDCSGDGVTWCEMTVGVEREAAAAPRMGR CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCHHHHCCCCCCC DEPAAGDQTPPAGWDEWHREWDEIKGHIMALMKPALRLDELAPRQRVALEYLEREGVEDN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCH VILALYRRLRGAPSLSVLEPLSAVVPVKGWGGADWPQKMQIVCGPSGVGKTSAVVRMALA HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH LRRQNAGVRICVLNADSQRGSGRMVLRHYAELCGMGYHEISGPADAAALLGELDGYDKIL HHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCCCCCEEE VDTPVPGRGATLRSLLEETGLDVLEQQVPAAVQLVMSPLYGDAQISFFLRQYECGLPCGL EECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHH VWTKLDEACNFGALINVPAASGLPVTALSFGSGLKNSLASARGTMIWRLVFKKQLPGDVA HHHHHHHHCCCCCEEECCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHC AR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA