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The map label for this gene is yesN [H]

Identifier: 78355375

GI number: 78355375

Start: 315970

End: 317190

Strand: Direct

Name: yesN [H]

Synonym: Dde_0328

Alternate gene names: 78355375

Gene position: 315970-317190 (Clockwise)

Preceding gene: 78355374

Following gene: 78355380

Centisome position: 8.47

GC content: 58.31

Gene sequence:

>1221_bases
ATGTCTGTCATCGCTGTCCACTATGGGATCTACTGCCACGAAGACCAGTACCTGAGCGCCATCCGGGAGGCTACCGGATA
CAGTTTTGTTACTGATGACACCGTGGTTGAAGAGGCTTCGCGCCGTTCCGGCATCAGTGCGTCGCGCCTGCGCAAGGCTT
TCGACGCCAAGCCGTCCATCTTCAATTCGTTCACCAACGACAGGGAACGCGCCAGAGCGTGGTTCCGCATGATTGTTGCT
GAATATCTGGTCAAGGAAAACGTCATGTTCGGCGGGTTTACCGCCATGATGGTGCCTGCGGCGGTAAAACATGCGCTCAA
GGTGTGTCTTATCGCCAACAGGGATGCACGGCTTGCGGCTGCCGCAACGCTGGGCATATCAGAGAGCGACGCGCAGAAAA
CCATGCGCGCAGGTGATTCCGATGCCGCGGAATGGGTGAACACCCTGACCGGCAATACCGACCCGTGGGCTGCCGGGCTG
TATGACATTGTCATACCCGTGGATAAAAGCACCCCGCTGGAGGCTGCCGCCCTTGTGAAGGAAATGCTGGGCCGTGAGGC
CGTGCAACCCGACGCCCGCAGCAGAAAAACAGCGCAGGATGCGCTGCTGGCTGCTCAGGTGGAAGTGCAGCTGGCCACCA
AGGGCCATTTTGTGGCTGTGGCGGCAGATGCCGGCACGGTCACACTGACGGTCAACGGTCATGTGTCCGACCTTGAGCGG
CTGGGCACCACGCTGCGGGCTGCTGTTATCGACATGCCCGGAGTGGATGACGTGCGTGTGGTGGGCGGTCGTGACATTCA
TACCCCGTCCATTTACCGGCAGTGCAATTTTGAATTGCCCAACAGAGTGCTGGTGGTGGACGATGAGCGCGACTTTGCCC
AGACGCTTTCGCAGCGGCTGGAAGTGCGCGAAATGGGTTCCGCCGTGGCATATGACGGTGAATCGGCACTGGAGATCGTG
GAACGCGATCAGCCGGAAGTGATGATTCTTGACCTGAAAATGCCCGGAGTGGACGGCAAGGAAGTACTGCGCCGCGTAAA
GGAAACCCGTCCTGAAGTGGAAGTGATCATTCTGACCGGTCAGGGTTCGGAAGCGGACCGCGAAGAATGCATGAAGCTGG
GCGCATTCGCGTATCTGGAAAAACCCGTGGATATCGAACAGCTCAGTTCCGTACTGCTTAAAGCAAATACCAAGGCGCGT
CAGAACCTGAAAAGCGCCTGA

Upstream 100 bases:

>100_bases
CGGAAGAAAAGACCCGTGAAAAGATTCAGGCCATTCTCGAAGAGAAAGGGTGGTAAGCAGGACCGCCCCGGCCGACCATG
CAGGTGTAAGGAGAGGAACT

Downstream 100 bases:

>100_bases
TGATAACCCGCCGGCGGTTCTGTAAAAGAACCGCCGGTTTCTGCGGGCAAGTGCCCGCAGCCGATTCTTCCGCACTCTGA
GTTTGTGACCGTACAGGCTC

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSVIAVHYGIYCHEDQYLSAIREATGYSFVTDDTVVEEASRRSGISASRLRKAFDAKPSIFNSFTNDRERARAWFRMIVA
EYLVKENVMFGGFTAMMVPAAVKHALKVCLIANRDARLAAAATLGISESDAQKTMRAGDSDAAEWVNTLTGNTDPWAAGL
YDIVIPVDKSTPLEAAALVKEMLGREAVQPDARSRKTAQDALLAAQVEVQLATKGHFVAVAADAGTVTLTVNGHVSDLER
LGTTLRAAVIDMPGVDDVRVVGGRDIHTPSIYRQCNFELPNRVLVVDDERDFAQTLSQRLEVREMGSAVAYDGESALEIV
ERDQPEVMILDLKMPGVDGKEVLRRVKETRPEVEVIILTGQGSEADREECMKLGAFAYLEKPVDIEQLSSVLLKANTKAR
QNLKSA

Sequences:

>Translated_406_residues
MSVIAVHYGIYCHEDQYLSAIREATGYSFVTDDTVVEEASRRSGISASRLRKAFDAKPSIFNSFTNDRERARAWFRMIVA
EYLVKENVMFGGFTAMMVPAAVKHALKVCLIANRDARLAAAATLGISESDAQKTMRAGDSDAAEWVNTLTGNTDPWAAGL
YDIVIPVDKSTPLEAAALVKEMLGREAVQPDARSRKTAQDALLAAQVEVQLATKGHFVAVAADAGTVTLTVNGHVSDLER
LGTTLRAAVIDMPGVDDVRVVGGRDIHTPSIYRQCNFELPNRVLVVDDERDFAQTLSQRLEVREMGSAVAYDGESALEIV
ERDQPEVMILDLKMPGVDGKEVLRRVKETRPEVEVIILTGQGSEADREECMKLGAFAYLEKPVDIEQLSSVLLKANTKAR
QNLKSA
>Mature_405_residues
SVIAVHYGIYCHEDQYLSAIREATGYSFVTDDTVVEEASRRSGISASRLRKAFDAKPSIFNSFTNDRERARAWFRMIVAE
YLVKENVMFGGFTAMMVPAAVKHALKVCLIANRDARLAAAATLGISESDAQKTMRAGDSDAAEWVNTLTGNTDPWAAGLY
DIVIPVDKSTPLEAAALVKEMLGREAVQPDARSRKTAQDALLAAQVEVQLATKGHFVAVAADAGTVTLTVNGHVSDLERL
GTTLRAAVIDMPGVDDVRVVGGRDIHTPSIYRQCNFELPNRVLVVDDERDFAQTLSQRLEVREMGSAVAYDGESALEIVE
RDQPEVMILDLKMPGVDGKEVLRRVKETRPEVEVIILTGQGSEADREECMKLGAFAYLEKPVDIEQLSSVLLKANTKARQ
NLKSA

Specific function: Member of the two-component regulatory system yesM/yesN [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=115, Percent_Identity=29.5652173913043, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790299, Length=113, Percent_Identity=30.9734513274336, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 44432; Mature: 44301

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIAVHYGIYCHEDQYLSAIREATGYSFVTDDTVVEEASRRSGISASRLRKAFDAKPSI
CEEEEEEEEEEECCHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCHH
FNSFTNDRERARAWFRMIVAEYLVKENVMFGGFTAMMVPAAVKHALKVCLIANRDARLAA
HHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHEEECCCCCEEH
AATLGISESDAQKTMRAGDSDAAEWVNTLTGNTDPWAAGLYDIVIPVDKSTPLEAAALVK
HEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH
EMLGREAVQPDARSRKTAQDALLAAQVEVQLATKGHFVAVAADAGTVTLTVNGHVSDLER
HHHCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCCEEEEEECCCHHHHHH
LGTTLRAAVIDMPGVDDVRVVGGRDIHTPSIYRQCNFELPNRVLVVDDERDFAQTLSQRL
HHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHHH
EVREMGSAVAYDGESALEIVERDQPEVMILDLKMPGVDGKEVLRRVKETRPEVEVIILTG
HHHHHCCEEEECCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEC
QGSEADREECMKLGAFAYLEKPVDIEQLSSVLLKANTKARQNLKSA
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure 
SVIAVHYGIYCHEDQYLSAIREATGYSFVTDDTVVEEASRRSGISASRLRKAFDAKPSI
EEEEEEEEEEECCHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCHH
FNSFTNDRERARAWFRMIVAEYLVKENVMFGGFTAMMVPAAVKHALKVCLIANRDARLAA
HHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHEEECCCCCEEH
AATLGISESDAQKTMRAGDSDAAEWVNTLTGNTDPWAAGLYDIVIPVDKSTPLEAAALVK
HEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH
EMLGREAVQPDARSRKTAQDALLAAQVEVQLATKGHFVAVAADAGTVTLTVNGHVSDLER
HHHCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCCEEEEEECCCHHHHHH
LGTTLRAAVIDMPGVDDVRVVGGRDIHTPSIYRQCNFELPNRVLVVDDERDFAQTLSQRL
HHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHHH
EVREMGSAVAYDGESALEIVERDQPEVMILDLKMPGVDGKEVLRRVKETRPEVEVIILTG
HHHHHCCEEEECCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEC
QGSEADREECMKLGAFAYLEKPVDIEQLSSVLLKANTKARQNLKSA
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]