| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yceG [C]
Identifier: 78355362
GI number: 78355362
Start: 305227
End: 306396
Strand: Direct
Name: yceG [C]
Synonym: Dde_0315
Alternate gene names: 78355362
Gene position: 305227-306396 (Clockwise)
Preceding gene: 78355361
Following gene: 78355363
Centisome position: 8.18
GC content: 61.54
Gene sequence:
>1170_bases ATGAACGAGAACCCGCAGCAGGAACCGGCAGAACGGCATCCGGCGGCATCTTCCGCAGATGGTGCGCCGGAGCAGGACAA CTCGGATGCGGCTCGCGGCGGTGCTGTGCGCCTGCGGCGCAGATTGCGCGTGCTGCCTGCCGCGGCGCTGGCGTTGCTGC TGGCCGTGGCGGTCTATGTGGTTCTGGATGCGTGGATGTTCATGACCACGCCGCCGGAAAAGAACGGGCGCGATGTGACC GTGCAGATACGGCCCGGTTCGACGTTTATCCGTGTGGCGTGGCAGCTCAGGCAGGCCGGAGCCATAACGGATGTGACGCG GTTCCGTCTGCTGGGCATGTACAGAAAGCAGACCGGAGCCGTACACGCGGGAGAATTTCTGGTGAATACCGGCTGGACCC CCGGCAGGGTGCTGGACGCCGTGGTGAACGGCACGCCGGTGGTTCATCCGCTGGCGCTGCGCGAAGGTTTGCCGTGGTGG GAGGTGGCCCGTCTGGTGGAACAGGGCGGTTTTGCCCGGTATGAAGATTTCAGGGCGGTTATCCACGATCCGGAATTTCT CGGGCACTGGAAAATCCCTTTCGATTCTGCAGAGGGCTACCTTTTTCCGGAAACGTACATGCTGCAGCGTCCGCCGGAGA TGAACAGGGCTTCCGCCCGTGCCGTGGCGGATATGCTGGTGAGTATGTTCTACCGTAAGTCTGCATTGCTGTGGTCCGTA CAAGCGCCGGAACACGAAGCCGGTGTCCGGCAGGATGAACCTCAGCCGGAAGAGCTGGGAAGGCTGGTCATTCTCGCCTC GCTGGTGGAAAAAGAAACCGGACTGCCTTCCGAACGCGAGCGCATAGCCGGTGTGTATGCCGCGCGCCTGAGGCGGGGCA TGCTTATGCAGTGTGACCCCACTGTCATCTACGGGCTTGGAGAATCCTTTGACGGCAACCTGACCCGCACTCATCTGCGC GATGCGGAAAATCCCTATAATACCTACCGGCATAAAGGCCTGCCGCCGGGCCCTATCTGTTCTCCGGGGCTGGATTCCCT TGCCGCGGCGCTGCGGCCGGAACAGCACAACTATCTGTATTTTGTCTCGCGCGGCGACGGCTCTCATCATTTCAGCAGTA CGCTGACAGAGCATAACCGCGCAGTACGCAAGTATCAGCTGGGCAGATAG
Upstream 100 bases:
>100_bases TCCGCGAGCGTGAAGCCGTGGTGGATCAGCAGGCCGCAGTGCGTATTCTTGAATCGTTTCTGAACCTGCCGGAAGACCGG CGTATACCTTTGGAAGGATA
Downstream 100 bases:
>100_bases GCGGTACCCTTTTCTCCCGTGTTCTGCGCGGGAGATTTTGTTTGTTGCAGCAGAGTACCCCGATTTTCTCTCTTGTTTCC TGCCGGATTGCCGGTTGCGT
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MNENPQQEPAERHPAASSADGAPEQDNSDAARGGAVRLRRRLRVLPAAALALLLAVAVYVVLDAWMFMTTPPEKNGRDVT VQIRPGSTFIRVAWQLRQAGAITDVTRFRLLGMYRKQTGAVHAGEFLVNTGWTPGRVLDAVVNGTPVVHPLALREGLPWW EVARLVEQGGFARYEDFRAVIHDPEFLGHWKIPFDSAEGYLFPETYMLQRPPEMNRASARAVADMLVSMFYRKSALLWSV QAPEHEAGVRQDEPQPEELGRLVILASLVEKETGLPSERERIAGVYAARLRRGMLMQCDPTVIYGLGESFDGNLTRTHLR DAENPYNTYRHKGLPPGPICSPGLDSLAAALRPEQHNYLYFVSRGDGSHHFSSTLTEHNRAVRKYQLGR
Sequences:
>Translated_389_residues MNENPQQEPAERHPAASSADGAPEQDNSDAARGGAVRLRRRLRVLPAAALALLLAVAVYVVLDAWMFMTTPPEKNGRDVT VQIRPGSTFIRVAWQLRQAGAITDVTRFRLLGMYRKQTGAVHAGEFLVNTGWTPGRVLDAVVNGTPVVHPLALREGLPWW EVARLVEQGGFARYEDFRAVIHDPEFLGHWKIPFDSAEGYLFPETYMLQRPPEMNRASARAVADMLVSMFYRKSALLWSV QAPEHEAGVRQDEPQPEELGRLVILASLVEKETGLPSERERIAGVYAARLRRGMLMQCDPTVIYGLGESFDGNLTRTHLR DAENPYNTYRHKGLPPGPICSPGLDSLAAALRPEQHNYLYFVSRGDGSHHFSSTLTEHNRAVRKYQLGR >Mature_389_residues MNENPQQEPAERHPAASSADGAPEQDNSDAARGGAVRLRRRLRVLPAAALALLLAVAVYVVLDAWMFMTTPPEKNGRDVT VQIRPGSTFIRVAWQLRQAGAITDVTRFRLLGMYRKQTGAVHAGEFLVNTGWTPGRVLDAVVNGTPVVHPLALREGLPWW EVARLVEQGGFARYEDFRAVIHDPEFLGHWKIPFDSAEGYLFPETYMLQRPPEMNRASARAVADMLVSMFYRKSALLWSV QAPEHEAGVRQDEPQPEELGRLVILASLVEKETGLPSERERIAGVYAARLRRGMLMQCDPTVIYGLGESFDGNLTRTHLR DAENPYNTYRHKGLPPGPICSPGLDSLAAALRPEQHNYLYFVSRGDGSHHFSSTLTEHNRAVRKYQLGR
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=319, Percent_Identity=31.0344827586207, Blast_Score=143, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 43466; Mature: 43466
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENPQQEPAERHPAASSADGAPEQDNSDAARGGAVRLRRRLRVLPAAALALLLAVAVYV CCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDAWMFMTTPPEKNGRDVTVQIRPGSTFIRVAWQLRQAGAITDVTRFRLLGMYRKQTGA HHHHHHHEECCCCCCCCEEEEEEECCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC VHAGEFLVNTGWTPGRVLDAVVNGTPVVHPLALREGLPWWEVARLVEQGGFARYEDFRAV EECCCEEEECCCCCHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH IHDPEFLGHWKIPFDSAEGYLFPETYMLQRPPEMNRASARAVADMLVSMFYRKSALLWSV HCCCHHCCEECCCCCCCCCEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEE QAPEHEAGVRQDEPQPEELGRLVILASLVEKETGLPSERERIAGVYAARLRRGMLMQCDP CCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCC TVIYGLGESFDGNLTRTHLRDAENPYNTYRHKGLPPGPICSPGLDSLAAALRPEQHNYLY EEEEECCCCCCCCCHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEE FVSRGDGSHHFSSTLTEHNRAVRKYQLGR EEECCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNENPQQEPAERHPAASSADGAPEQDNSDAARGGAVRLRRRLRVLPAAALALLLAVAVYV CCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDAWMFMTTPPEKNGRDVTVQIRPGSTFIRVAWQLRQAGAITDVTRFRLLGMYRKQTGA HHHHHHHEECCCCCCCCEEEEEEECCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC VHAGEFLVNTGWTPGRVLDAVVNGTPVVHPLALREGLPWWEVARLVEQGGFARYEDFRAV EECCCEEEECCCCCHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH IHDPEFLGHWKIPFDSAEGYLFPETYMLQRPPEMNRASARAVADMLVSMFYRKSALLWSV HCCCHHCCEECCCCCCCCCEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEE QAPEHEAGVRQDEPQPEELGRLVILASLVEKETGLPSERERIAGVYAARLRRGMLMQCDP CCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCC TVIYGLGESFDGNLTRTHLRDAENPYNTYRHKGLPPGPICSPGLDSLAAALRPEQHNYLY EEEEECCCCCCCCCHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEE FVSRGDGSHHFSSTLTEHNRAVRKYQLGR EEECCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]