| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is folD
Identifier: 78355343
GI number: 78355343
Start: 286436
End: 287296
Strand: Direct
Name: folD
Synonym: Dde_0296
Alternate gene names: 78355343
Gene position: 286436-287296 (Clockwise)
Preceding gene: 78355342
Following gene: 78355344
Centisome position: 7.68
GC content: 61.32
Gene sequence:
>861_bases ATGATTCTGCTGGACGGTAAAGCCACCGCCGCGGCTGTGCGCGAAGAATTGAAAAAGGATGTGGACGCCCTGAAAGACCG CGCCGGAAGAGCGCCCGGGCTGGCTGTTATTCTGGTGGGCGACGACCCCGCATCGCAGGTGTACGTGCGCAACAAAGAAC GTGCCTGCGCCGACGCCGGAATCCGTTCCGAAGCGTTCCGCATCTCTGCACAGACCACGCAGCAGGAGCTTGAGGAACGC ATTGCCGCCCTCAACGCCCGTGAAGACATAGACGGCATTCTGCTGCAGCTGCCTCTGCCCGCCGGACTGGACAGCCAGCG CTGTCTTGAACTTATCGACCCCGCCAAGGATGTGGACGGCTTTCATCCTGTCAACATGGGCAAACTGACGCTGGGGCTTC CCGGCTTCCGGCCCTGTACGCCGGCAGGCGTGATGACACTGCTGGAACGCTACAACCTGTCGCCGGCGGGCAAAAAAGCC GTTGTGCTCGGCCGCTCGAATATTGTGGGCAAGCCTTTGGCGCTCATGCTGGGCGCTTCGGGTCCTTTTGCCAATGCCAC TGTCACCGTGTGTCATTCGCGCACTCCCGACCTTGCGCAGCAGTGCCGCGAAGCGGATTTTCTGTTTGTGGCCATCGGCA GGGCCAACTTTGTCACCGCAGACATGGTGAAACCCGGTGCCGTGGTGGTGGACGTGGGCATCAACCGGACGGAAAACGGC CTTGCGGGAGATGTTGATTTCGGCCCTGTAAGCAAGGTGGCCTCTGCCATTACGCCTGTGCCGGGCGGAATAGGCCCCAT GACCATCGCGCAGCTGCTGGTGAATACCGTGGCTTCGTGGAAGAAACGCTGCGGCGTGTAA
Upstream 100 bases:
>100_bases GCTGTCTGCTCCGGCCGGTTTTTTTGTTGCGCCGGTCTGGCGGCGCGCGACAGGCTGCATAACCATACTATGTGCTGCAT ACACTGCAAGGAGTACGCCC
Downstream 100 bases:
>100_bases CTGCGGGGTAACCGCATGCCGTCCGCCGCTGTCTCTGCCCCGGCTGCAGGAACACCGCCGTGGGGGCTGCCTTTCGCCGC GCATGGCGGACGGCCGCGCG
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MILLDGKATAAAVREELKKDVDALKDRAGRAPGLAVILVGDDPASQVYVRNKERACADAGIRSEAFRISAQTTQQELEER IAALNAREDIDGILLQLPLPAGLDSQRCLELIDPAKDVDGFHPVNMGKLTLGLPGFRPCTPAGVMTLLERYNLSPAGKKA VVLGRSNIVGKPLALMLGASGPFANATVTVCHSRTPDLAQQCREADFLFVAIGRANFVTADMVKPGAVVVDVGINRTENG LAGDVDFGPVSKVASAITPVPGGIGPMTIAQLLVNTVASWKKRCGV
Sequences:
>Translated_286_residues MILLDGKATAAAVREELKKDVDALKDRAGRAPGLAVILVGDDPASQVYVRNKERACADAGIRSEAFRISAQTTQQELEER IAALNAREDIDGILLQLPLPAGLDSQRCLELIDPAKDVDGFHPVNMGKLTLGLPGFRPCTPAGVMTLLERYNLSPAGKKA VVLGRSNIVGKPLALMLGASGPFANATVTVCHSRTPDLAQQCREADFLFVAIGRANFVTADMVKPGAVVVDVGINRTENG LAGDVDFGPVSKVASAITPVPGGIGPMTIAQLLVNTVASWKKRCGV >Mature_286_residues MILLDGKATAAAVREELKKDVDALKDRAGRAPGLAVILVGDDPASQVYVRNKERACADAGIRSEAFRISAQTTQQELEER IAALNAREDIDGILLQLPLPAGLDSQRCLELIDPAKDVDGFHPVNMGKLTLGLPGFRPCTPAGVMTLLERYNLSPAGKKA VVLGRSNIVGKPLALMLGASGPFANATVTVCHSRTPDLAQQCREADFLFVAIGRANFVTADMVKPGAVVVDVGINRTENG LAGDVDFGPVSKVASAITPVPGGIGPMTIAQLLVNTVASWKKRCGV
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI94721354, Length=293, Percent_Identity=42.320819112628, Blast_Score=224, Evalue=9e-59, Organism=Homo sapiens, GI222418558, Length=293, Percent_Identity=42.6621160409556, Blast_Score=217, Evalue=9e-57, Organism=Homo sapiens, GI222136639, Length=292, Percent_Identity=39.3835616438356, Blast_Score=198, Evalue=5e-51, Organism=Escherichia coli, GI1786741, Length=278, Percent_Identity=51.0791366906475, Blast_Score=274, Evalue=5e-75, Organism=Caenorhabditis elegans, GI17568735, Length=261, Percent_Identity=42.1455938697318, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6319558, Length=291, Percent_Identity=42.9553264604811, Blast_Score=221, Evalue=9e-59, Organism=Saccharomyces cerevisiae, GI6321643, Length=299, Percent_Identity=40.133779264214, Blast_Score=210, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6322933, Length=309, Percent_Identity=24.5954692556634, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI17136816, Length=293, Percent_Identity=45.7337883959044, Blast_Score=254, Evalue=5e-68, Organism=Drosophila melanogaster, GI17136818, Length=293, Percent_Identity=45.7337883959044, Blast_Score=254, Evalue=6e-68, Organism=Drosophila melanogaster, GI62472483, Length=288, Percent_Identity=44.7916666666667, Blast_Score=225, Evalue=2e-59, Organism=Drosophila melanogaster, GI45551871, Length=288, Percent_Identity=44.7916666666667, Blast_Score=225, Evalue=2e-59, Organism=Drosophila melanogaster, GI24645718, Length=288, Percent_Identity=44.7916666666667, Blast_Score=225, Evalue=3e-59, Organism=Drosophila melanogaster, GI17137370, Length=288, Percent_Identity=44.7916666666667, Blast_Score=225, Evalue=3e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_DESDG (Q316P9)
Other databases:
- EMBL: CP000112 - RefSeq: YP_386792.1 - ProteinModelPortal: Q316P9 - SMR: Q316P9 - STRING: Q316P9 - GeneID: 3755117 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_0296 - NMPDR: fig|207559.3.peg.1086 - eggNOG: COG0190 - HOGENOM: HBG328751 - OMA: DVVYETA - ProtClustDB: PRK14184 - BioCyc: DDES207559:DDE_0296-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 30071; Mature: 30071
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLDGKATAAAVREELKKDVDALKDRAGRAPGLAVILVGDDPASQVYVRNKERACADAG CEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCHHHHHHCC IRSEAFRISAQTTQQELEERIAALNAREDIDGILLQLPLPAGLDSQRCLELIDPAKDVDG CCCHHEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCHHHCCC FHPVNMGKLTLGLPGFRPCTPAGVMTLLERYNLSPAGKKAVVLGRSNIVGKPLALMLGAS CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECC GPFANATVTVCHSRTPDLAQQCREADFLFVAIGRANFVTADMVKPGAVVVDVGINRTENG CCCCCCEEEEEECCCHHHHHHHHCCCEEEEEECCCCEEECCCCCCCEEEEEECCCCCCCC LAGDVDFGPVSKVASAITPVPGGIGPMTIAQLLVNTVASWKKRCGV CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILLDGKATAAAVREELKKDVDALKDRAGRAPGLAVILVGDDPASQVYVRNKERACADAG CEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCHHHHHHCC IRSEAFRISAQTTQQELEERIAALNAREDIDGILLQLPLPAGLDSQRCLELIDPAKDVDG CCCHHEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCHHHCCC FHPVNMGKLTLGLPGFRPCTPAGVMTLLERYNLSPAGKKAVVLGRSNIVGKPLALMLGAS CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECC GPFANATVTVCHSRTPDLAQQCREADFLFVAIGRANFVTADMVKPGAVVVDVGINRTENG CCCCCCEEEEEECCCHHHHHHHHCCCEEEEEECCCCEEECCCCCCCEEEEEECCCCCCCC LAGDVDFGPVSKVASAITPVPGGIGPMTIAQLLVNTVASWKKRCGV CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA