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The map label for this gene is 78355331

Identifier: 78355331

GI number: 78355331

Start: 273935

End: 274528

Strand: Direct

Name: 78355331

Synonym: Dde_0284

Alternate gene names: NA

Gene position: 273935-274528 (Clockwise)

Preceding gene: 78355326

Following gene: 78355332

Centisome position: 7.34

GC content: 54.21

Gene sequence:

>594_bases
ATGAAAAGAATGAAGGTTAACATACAGCTGCTGTGGTTTATAGCTGTCTGCTGTGCGGCATTTGTACCGCAGCAGGCGGC
TGCGCATCCGCATGTGTTTGTGGAGGCGCTGGTACAGCTGGAGATTGAAAACGGCCGCCTGAAGGCTCTGCACGAGACGT
GGAGCTTTGACGAGATGTCCAGTGCCTTGTTTCTGGGCGATCTTGATTTGAATCAGGACGGTGCGCTGACGCCTGATGAA
TGGGAAAAACTGAAGGCGGACATTACCGGCTACCTGCACGAGGAAGGCTTTTACACGCACATTTATGCGGGCGGAAAGAC
CGCCGGTGTCACACGGGTGGAGCATTTCACCGCCACGTTCAGCGACGGCATGCTGCGGTATTCCTTCACGGTGCCGCTCG
ATCTGCCTGCGGCTGCAGGAGAAGTGGTCAAAGTGGCCTTGTACGACCCTACCTATTACACGGCCTTTTTCTTTGATGAA
CGGCATGTGACGGTGAAGGGTGCGGACAAAGCAAGGGTGGTGCTGCAGGAAGCTCCTGAACTTGCATATTATTACGGGCA
GATAGTGCCCTATGCCATAGAGCTGGAGTTGTAA

Upstream 100 bases:

>100_bases
ACTTGGCTGTCAGCCTGTGCTAACAGTGCGGTCCTGAAAACCGCGGCGGGCGGTCTGCGCCCCGCATGGCCGCACGTAGA
AAACAGTCCGGAAAAAAATA

Downstream 100 bases:

>100_bases
TGGTGCTGAAAAGAGTGTTTCCGGCGGTGGTTGCCGTATGTCTGCTGGCATGTGCCGCCCATGCGTCGCCGTTTACAGGC
AGCGGGGGCAATGCCCGCGG

Product: ABC transporter periplasmic component-like

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKRMKVNIQLLWFIAVCCAAFVPQQAAAHPHVFVEALVQLEIENGRLKALHETWSFDEMSSALFLGDLDLNQDGALTPDE
WEKLKADITGYLHEEGFYTHIYAGGKTAGVTRVEHFTATFSDGMLRYSFTVPLDLPAAAGEVVKVALYDPTYYTAFFFDE
RHVTVKGADKARVVLQEAPELAYYYGQIVPYAIELEL

Sequences:

>Translated_197_residues
MKRMKVNIQLLWFIAVCCAAFVPQQAAAHPHVFVEALVQLEIENGRLKALHETWSFDEMSSALFLGDLDLNQDGALTPDE
WEKLKADITGYLHEEGFYTHIYAGGKTAGVTRVEHFTATFSDGMLRYSFTVPLDLPAAAGEVVKVALYDPTYYTAFFFDE
RHVTVKGADKARVVLQEAPELAYYYGQIVPYAIELEL
>Mature_197_residues
MKRMKVNIQLLWFIAVCCAAFVPQQAAAHPHVFVEALVQLEIENGRLKALHETWSFDEMSSALFLGDLDLNQDGALTPDE
WEKLKADITGYLHEEGFYTHIYAGGKTAGVTRVEHFTATFSDGMLRYSFTVPLDLPAAAGEVVKVALYDPTYYTAFFFDE
RHVTVKGADKARVVLQEAPELAYYYGQIVPYAIELEL

Specific function: Unknown

COG id: COG3683

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010412 [H]

Pfam domain/function: PF06226 DUF1007 [H]

EC number: NA

Molecular weight: Translated: 22160; Mature: 22160

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMKVNIQLLWFIAVCCAAFVPQQAAAHPHVFVEALVQLEIENGRLKALHETWSFDEMS
CCCEEEEHHHHHHHHHHHHHHCCHHHCCCHHHHHEEEEEEEECCCEEEEEECCCCHHHHC
SALFLGDLDLNQDGALTPDEWEKLKADITGYLHEEGFYTHIYAGGKTAGVTRVEHFTATF
CEEEEEECCCCCCCCCCCHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCEEEEEEEEEC
SDGMLRYSFTVPLDLPAAAGEVVKVALYDPTYYTAFFFDERHVTVKGADKARVVLQEAPE
CCCEEEEEEEECEECCCCCCCEEEEEEECCCEEEEEEEECEEEEEECCCCEEEEECCCCH
LAYYYGQIVPYAIELEL
HHHHHHCEEEEEEEEEC
>Mature Secondary Structure
MKRMKVNIQLLWFIAVCCAAFVPQQAAAHPHVFVEALVQLEIENGRLKALHETWSFDEMS
CCCEEEEHHHHHHHHHHHHHHCCHHHCCCHHHHHEEEEEEEECCCEEEEEECCCCHHHHC
SALFLGDLDLNQDGALTPDEWEKLKADITGYLHEEGFYTHIYAGGKTAGVTRVEHFTATF
CEEEEEECCCCCCCCCCCHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCEEEEEEEEEC
SDGMLRYSFTVPLDLPAAAGEVVKVALYDPTYYTAFFFDERHVTVKGADKARVVLQEAPE
CCCEEEEEEEECEECCCCCCCEEEEEEECCCEEEEEEEECEEEEEECCCCEEEEECCCCH
LAYYYGQIVPYAIELEL
HHHHHHCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1987149 [H]