Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78355293

Identifier: 78355293

GI number: 78355293

Start: 229587

End: 230999

Strand: Direct

Name: 78355293

Synonym: Dde_0246

Alternate gene names: NA

Gene position: 229587-230999 (Clockwise)

Preceding gene: 78355286

Following gene: 78355294

Centisome position: 6.15

GC content: 62.77

Gene sequence:

>1413_bases
ATGAGCAGACGCCTGTTGGTAACGATGGCCGTTACGGGGCTTGCCTTACTCGTCGCCGCGGGGGGCTACTGGTGGACGCG
CCGCGTGATGGTGTTTTCCGATTCCGCCTGGCCTGTGCCTGCGGTCTCCTCCCTTGCGCGCATTTCCATGATTTCCGGCG
GTACGCCGTTTGATCTGATATCCGGCGACGGCCGCTGGGTGGTGCAGGACCCGCAGACAGGTATGATGTGTCTTGCCGAT
TCCGCCCGCGTGAACCGGCTGGTGGACACGGTGCGGCAGAACCGCCCCGTGCAGCATCTGGGCGCGTTCGAGCCTTCTGC
AGCCGCAGCCTACGGGCTGGACAAAAATCTGACCGGTCTTACGTTTTACGGGCGCAGGCAGTGGAGCATTCATGTGGGTG
CCGAAGGCTGGCGCAAGCATACCGTGTATGCCCGCGCCACGCAGGAAGGCGACGACATGTACCTGCTGGACAGCGTGTAC
CGCGACATGCTTTCGGCGGAGGCCGCATCGTACTGTGATATGGGGCTTGTGGGTGTTTCTGCCGCGCAGGTTGTCCGGCT
GGCAGTGGAAGGCCCCGGCATTGGTGCGTGGGAGGTTGCCCGTACGGCTTCGGGATTTGCCTTTTCGGGGCAGCTGGCCG
GTACAGACGCGCAGGTGTCTTCGCAGGCTGTCGATTTTTATCTGCATGTGCTGACGGGGATGAGGGCTTCCGGTCTTACG
GAAACTGCACCGGAGGATCTGCCGCCCCCGCAGCTGCGCATCAGTGTGTGGCGGCAGGGAGCAGCCCGGCCGGAAGAGGT
GCTCATTTATCATACCGGCAACGGCGGTTCTTCTTTTTTGTGTCAGGCCAGCCGGCAGCCCGGTTTTGTGCTGCTGGAAG
ATGACCGCGTTGACAAGCTTTCGCGCTCTGCCTTTGATATGAGCGAGCGCCCTGTGCTTTCACGTCCGCTGAACGGGGTG
GAAGGGCAGAAGATAACCCTGCGCAGAGACGGTGTGGAAACCACCTTTCTGCTGGGGCGCAAGGAACAGGGATGGCGTGA
TCTGGTAACCGGCGGCACCGTGCTGGGGCTGGATGTCATCACCTACGGACTTGGTTCGCTGCAGTACGAGTTTCCGCCGC
AGGACACGCCTCCGGAACAGGCCGTGCCCTGGCTTGTGTGGGAACTGTACGGAGAGGGCGGCGCAGCGGCGCTTGCCTTG
TATTTTTATAAAGATCCGGCGCTGCCCGCGGGGTTTTGCCGGGTCAGGGTGGACGACACGGGACCGTGGTTTACGGTGGG
AACGCGTCTTGTGGATGACATGCTGAGCAGGGTGCCCGCTCCGGCACCGGATCCGGTCATGCCGCAGACAGAGCCTCCGT
CCGCACCGTCCTCTGCCGCCGCCAATGCCACAGAACAGGCAAACGGGCAGTGA

Upstream 100 bases:

>100_bases
CGGCAGGACGCGCGACACGGCGCTGCGGCACAGCATTACCGGAAAACCGGCCGCCCGCTTCGCGGTATGCCTTTTTATTT
TTATAGATACAAGTGCACTC

Downstream 100 bases:

>100_bases
CCGCCCGCATTCAATATCGTCAAGGAGTCTAACATGGCACGCATTACCGTAGAAGATTGCATGGAGCGCGTAAGCAACCG
CTTTCTGCTTGTACAGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MSRRLLVTMAVTGLALLVAAGGYWWTRRVMVFSDSAWPVPAVSSLARISMISGGTPFDLISGDGRWVVQDPQTGMMCLAD
SARVNRLVDTVRQNRPVQHLGAFEPSAAAAYGLDKNLTGLTFYGRRQWSIHVGAEGWRKHTVYARATQEGDDMYLLDSVY
RDMLSAEAASYCDMGLVGVSAAQVVRLAVEGPGIGAWEVARTASGFAFSGQLAGTDAQVSSQAVDFYLHVLTGMRASGLT
ETAPEDLPPPQLRISVWRQGAARPEEVLIYHTGNGGSSFLCQASRQPGFVLLEDDRVDKLSRSAFDMSERPVLSRPLNGV
EGQKITLRRDGVETTFLLGRKEQGWRDLVTGGTVLGLDVITYGLGSLQYEFPPQDTPPEQAVPWLVWELYGEGGAAALAL
YFYKDPALPAGFCRVRVDDTGPWFTVGTRLVDDMLSRVPAPAPDPVMPQTEPPSAPSSAAANATEQANGQ

Sequences:

>Translated_470_residues
MSRRLLVTMAVTGLALLVAAGGYWWTRRVMVFSDSAWPVPAVSSLARISMISGGTPFDLISGDGRWVVQDPQTGMMCLAD
SARVNRLVDTVRQNRPVQHLGAFEPSAAAAYGLDKNLTGLTFYGRRQWSIHVGAEGWRKHTVYARATQEGDDMYLLDSVY
RDMLSAEAASYCDMGLVGVSAAQVVRLAVEGPGIGAWEVARTASGFAFSGQLAGTDAQVSSQAVDFYLHVLTGMRASGLT
ETAPEDLPPPQLRISVWRQGAARPEEVLIYHTGNGGSSFLCQASRQPGFVLLEDDRVDKLSRSAFDMSERPVLSRPLNGV
EGQKITLRRDGVETTFLLGRKEQGWRDLVTGGTVLGLDVITYGLGSLQYEFPPQDTPPEQAVPWLVWELYGEGGAAALAL
YFYKDPALPAGFCRVRVDDTGPWFTVGTRLVDDMLSRVPAPAPDPVMPQTEPPSAPSSAAANATEQANGQ
>Mature_469_residues
SRRLLVTMAVTGLALLVAAGGYWWTRRVMVFSDSAWPVPAVSSLARISMISGGTPFDLISGDGRWVVQDPQTGMMCLADS
ARVNRLVDTVRQNRPVQHLGAFEPSAAAAYGLDKNLTGLTFYGRRQWSIHVGAEGWRKHTVYARATQEGDDMYLLDSVYR
DMLSAEAASYCDMGLVGVSAAQVVRLAVEGPGIGAWEVARTASGFAFSGQLAGTDAQVSSQAVDFYLHVLTGMRASGLTE
TAPEDLPPPQLRISVWRQGAARPEEVLIYHTGNGGSSFLCQASRQPGFVLLEDDRVDKLSRSAFDMSERPVLSRPLNGVE
GQKITLRRDGVETTFLLGRKEQGWRDLVTGGTVLGLDVITYGLGSLQYEFPPQDTPPEQAVPWLVWELYGEGGAAALALY
FYKDPALPAGFCRVRVDDTGPWFTVGTRLVDDMLSRVPAPAPDPVMPQTEPPSAPSSAAANATEQANGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50803; Mature: 50672

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRLLVTMAVTGLALLVAAGGYWWTRRVMVFSDSAWPVPAVSSLARISMISGGTPFDLI
CCCEEEEHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHEECCCCCEEEE
SGDGRWVVQDPQTGMMCLADSARVNRLVDTVRQNRPVQHLGAFEPSAAAAYGLDKNLTGL
CCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCCCCCCCEE
TFYGRRQWSIHVGAEGWRKHTVYARATQEGDDMYLLDSVYRDMLSAEAASYCDMGLVGVS
EEECCEEEEEEECCCCCEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHC
AAQVVRLAVEGPGIGAWEVARTASGFAFSGQLAGTDAQVSSQAVDFYLHVLTGMRASGLT
HHHEEEEEECCCCCCHHHHHHCCCCCEEECEECCCCHHHHHHHHHHHHHHHHCCCCCCCC
ETAPEDLPPPQLRISVWRQGAARPEEVLIYHTGNGGSSFLCQASRQPGFVLLEDDRVDKL
CCCCCCCCCCCEEHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEECCCHHHH
SRSAFDMSERPVLSRPLNGVEGQKITLRRDGVETTFLLGRKEQGWRDLVTGGTVLGLDVI
HHHHCCCCCCCHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHCCCEEEHHHHH
TYGLGSLQYEFPPQDTPPEQAVPWLVWELYGEGGAAALALYFYKDPALPAGFCRVRVDDT
HHCCCCEEEECCCCCCCHHHCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCC
GPWFTVGTRLVDDMLSRVPAPAPDPVMPQTEPPSAPSSAAANATEQANGQ
CCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCC
>Mature Secondary Structure 
SRRLLVTMAVTGLALLVAAGGYWWTRRVMVFSDSAWPVPAVSSLARISMISGGTPFDLI
CCEEEEHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHEECCCCCEEEE
SGDGRWVVQDPQTGMMCLADSARVNRLVDTVRQNRPVQHLGAFEPSAAAAYGLDKNLTGL
CCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCCCCCCCEE
TFYGRRQWSIHVGAEGWRKHTVYARATQEGDDMYLLDSVYRDMLSAEAASYCDMGLVGVS
EEECCEEEEEEECCCCCEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHC
AAQVVRLAVEGPGIGAWEVARTASGFAFSGQLAGTDAQVSSQAVDFYLHVLTGMRASGLT
HHHEEEEEECCCCCCHHHHHHCCCCCEEECEECCCCHHHHHHHHHHHHHHHHCCCCCCCC
ETAPEDLPPPQLRISVWRQGAARPEEVLIYHTGNGGSSFLCQASRQPGFVLLEDDRVDKL
CCCCCCCCCCCEEHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEECCCHHHH
SRSAFDMSERPVLSRPLNGVEGQKITLRRDGVETTFLLGRKEQGWRDLVTGGTVLGLDVI
HHHHCCCCCCCHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHCCCEEEHHHHH
TYGLGSLQYEFPPQDTPPEQAVPWLVWELYGEGGAAALALYFYKDPALPAGFCRVRVDDT
HHCCCCEEEECCCCCCCHHHCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCC
GPWFTVGTRLVDDMLSRVPAPAPDPVMPQTEPPSAPSSAAANATEQANGQ
CCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA