Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78355293
Identifier: 78355293
GI number: 78355293
Start: 229587
End: 230999
Strand: Direct
Name: 78355293
Synonym: Dde_0246
Alternate gene names: NA
Gene position: 229587-230999 (Clockwise)
Preceding gene: 78355286
Following gene: 78355294
Centisome position: 6.15
GC content: 62.77
Gene sequence:
>1413_bases ATGAGCAGACGCCTGTTGGTAACGATGGCCGTTACGGGGCTTGCCTTACTCGTCGCCGCGGGGGGCTACTGGTGGACGCG CCGCGTGATGGTGTTTTCCGATTCCGCCTGGCCTGTGCCTGCGGTCTCCTCCCTTGCGCGCATTTCCATGATTTCCGGCG GTACGCCGTTTGATCTGATATCCGGCGACGGCCGCTGGGTGGTGCAGGACCCGCAGACAGGTATGATGTGTCTTGCCGAT TCCGCCCGCGTGAACCGGCTGGTGGACACGGTGCGGCAGAACCGCCCCGTGCAGCATCTGGGCGCGTTCGAGCCTTCTGC AGCCGCAGCCTACGGGCTGGACAAAAATCTGACCGGTCTTACGTTTTACGGGCGCAGGCAGTGGAGCATTCATGTGGGTG CCGAAGGCTGGCGCAAGCATACCGTGTATGCCCGCGCCACGCAGGAAGGCGACGACATGTACCTGCTGGACAGCGTGTAC CGCGACATGCTTTCGGCGGAGGCCGCATCGTACTGTGATATGGGGCTTGTGGGTGTTTCTGCCGCGCAGGTTGTCCGGCT GGCAGTGGAAGGCCCCGGCATTGGTGCGTGGGAGGTTGCCCGTACGGCTTCGGGATTTGCCTTTTCGGGGCAGCTGGCCG GTACAGACGCGCAGGTGTCTTCGCAGGCTGTCGATTTTTATCTGCATGTGCTGACGGGGATGAGGGCTTCCGGTCTTACG GAAACTGCACCGGAGGATCTGCCGCCCCCGCAGCTGCGCATCAGTGTGTGGCGGCAGGGAGCAGCCCGGCCGGAAGAGGT GCTCATTTATCATACCGGCAACGGCGGTTCTTCTTTTTTGTGTCAGGCCAGCCGGCAGCCCGGTTTTGTGCTGCTGGAAG ATGACCGCGTTGACAAGCTTTCGCGCTCTGCCTTTGATATGAGCGAGCGCCCTGTGCTTTCACGTCCGCTGAACGGGGTG GAAGGGCAGAAGATAACCCTGCGCAGAGACGGTGTGGAAACCACCTTTCTGCTGGGGCGCAAGGAACAGGGATGGCGTGA TCTGGTAACCGGCGGCACCGTGCTGGGGCTGGATGTCATCACCTACGGACTTGGTTCGCTGCAGTACGAGTTTCCGCCGC AGGACACGCCTCCGGAACAGGCCGTGCCCTGGCTTGTGTGGGAACTGTACGGAGAGGGCGGCGCAGCGGCGCTTGCCTTG TATTTTTATAAAGATCCGGCGCTGCCCGCGGGGTTTTGCCGGGTCAGGGTGGACGACACGGGACCGTGGTTTACGGTGGG AACGCGTCTTGTGGATGACATGCTGAGCAGGGTGCCCGCTCCGGCACCGGATCCGGTCATGCCGCAGACAGAGCCTCCGT CCGCACCGTCCTCTGCCGCCGCCAATGCCACAGAACAGGCAAACGGGCAGTGA
Upstream 100 bases:
>100_bases CGGCAGGACGCGCGACACGGCGCTGCGGCACAGCATTACCGGAAAACCGGCCGCCCGCTTCGCGGTATGCCTTTTTATTT TTATAGATACAAGTGCACTC
Downstream 100 bases:
>100_bases CCGCCCGCATTCAATATCGTCAAGGAGTCTAACATGGCACGCATTACCGTAGAAGATTGCATGGAGCGCGTAAGCAACCG CTTTCTGCTTGTACAGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MSRRLLVTMAVTGLALLVAAGGYWWTRRVMVFSDSAWPVPAVSSLARISMISGGTPFDLISGDGRWVVQDPQTGMMCLAD SARVNRLVDTVRQNRPVQHLGAFEPSAAAAYGLDKNLTGLTFYGRRQWSIHVGAEGWRKHTVYARATQEGDDMYLLDSVY RDMLSAEAASYCDMGLVGVSAAQVVRLAVEGPGIGAWEVARTASGFAFSGQLAGTDAQVSSQAVDFYLHVLTGMRASGLT ETAPEDLPPPQLRISVWRQGAARPEEVLIYHTGNGGSSFLCQASRQPGFVLLEDDRVDKLSRSAFDMSERPVLSRPLNGV EGQKITLRRDGVETTFLLGRKEQGWRDLVTGGTVLGLDVITYGLGSLQYEFPPQDTPPEQAVPWLVWELYGEGGAAALAL YFYKDPALPAGFCRVRVDDTGPWFTVGTRLVDDMLSRVPAPAPDPVMPQTEPPSAPSSAAANATEQANGQ
Sequences:
>Translated_470_residues MSRRLLVTMAVTGLALLVAAGGYWWTRRVMVFSDSAWPVPAVSSLARISMISGGTPFDLISGDGRWVVQDPQTGMMCLAD SARVNRLVDTVRQNRPVQHLGAFEPSAAAAYGLDKNLTGLTFYGRRQWSIHVGAEGWRKHTVYARATQEGDDMYLLDSVY RDMLSAEAASYCDMGLVGVSAAQVVRLAVEGPGIGAWEVARTASGFAFSGQLAGTDAQVSSQAVDFYLHVLTGMRASGLT ETAPEDLPPPQLRISVWRQGAARPEEVLIYHTGNGGSSFLCQASRQPGFVLLEDDRVDKLSRSAFDMSERPVLSRPLNGV EGQKITLRRDGVETTFLLGRKEQGWRDLVTGGTVLGLDVITYGLGSLQYEFPPQDTPPEQAVPWLVWELYGEGGAAALAL YFYKDPALPAGFCRVRVDDTGPWFTVGTRLVDDMLSRVPAPAPDPVMPQTEPPSAPSSAAANATEQANGQ >Mature_469_residues SRRLLVTMAVTGLALLVAAGGYWWTRRVMVFSDSAWPVPAVSSLARISMISGGTPFDLISGDGRWVVQDPQTGMMCLADS ARVNRLVDTVRQNRPVQHLGAFEPSAAAAYGLDKNLTGLTFYGRRQWSIHVGAEGWRKHTVYARATQEGDDMYLLDSVYR DMLSAEAASYCDMGLVGVSAAQVVRLAVEGPGIGAWEVARTASGFAFSGQLAGTDAQVSSQAVDFYLHVLTGMRASGLTE TAPEDLPPPQLRISVWRQGAARPEEVLIYHTGNGGSSFLCQASRQPGFVLLEDDRVDKLSRSAFDMSERPVLSRPLNGVE GQKITLRRDGVETTFLLGRKEQGWRDLVTGGTVLGLDVITYGLGSLQYEFPPQDTPPEQAVPWLVWELYGEGGAAALALY FYKDPALPAGFCRVRVDDTGPWFTVGTRLVDDMLSRVPAPAPDPVMPQTEPPSAPSSAAANATEQANGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50803; Mature: 50672
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRLLVTMAVTGLALLVAAGGYWWTRRVMVFSDSAWPVPAVSSLARISMISGGTPFDLI CCCEEEEHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHEECCCCCEEEE SGDGRWVVQDPQTGMMCLADSARVNRLVDTVRQNRPVQHLGAFEPSAAAAYGLDKNLTGL CCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCCCCCCCEE TFYGRRQWSIHVGAEGWRKHTVYARATQEGDDMYLLDSVYRDMLSAEAASYCDMGLVGVS EEECCEEEEEEECCCCCEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHC AAQVVRLAVEGPGIGAWEVARTASGFAFSGQLAGTDAQVSSQAVDFYLHVLTGMRASGLT HHHEEEEEECCCCCCHHHHHHCCCCCEEECEECCCCHHHHHHHHHHHHHHHHCCCCCCCC ETAPEDLPPPQLRISVWRQGAARPEEVLIYHTGNGGSSFLCQASRQPGFVLLEDDRVDKL CCCCCCCCCCCEEHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEECCCHHHH SRSAFDMSERPVLSRPLNGVEGQKITLRRDGVETTFLLGRKEQGWRDLVTGGTVLGLDVI HHHHCCCCCCCHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHCCCEEEHHHHH TYGLGSLQYEFPPQDTPPEQAVPWLVWELYGEGGAAALALYFYKDPALPAGFCRVRVDDT HHCCCCEEEECCCCCCCHHHCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCC GPWFTVGTRLVDDMLSRVPAPAPDPVMPQTEPPSAPSSAAANATEQANGQ CCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCC >Mature Secondary Structure SRRLLVTMAVTGLALLVAAGGYWWTRRVMVFSDSAWPVPAVSSLARISMISGGTPFDLI CCEEEEHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHEECCCCCEEEE SGDGRWVVQDPQTGMMCLADSARVNRLVDTVRQNRPVQHLGAFEPSAAAAYGLDKNLTGL CCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCCCCCCCEE TFYGRRQWSIHVGAEGWRKHTVYARATQEGDDMYLLDSVYRDMLSAEAASYCDMGLVGVS EEECCEEEEEEECCCCCEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHC AAQVVRLAVEGPGIGAWEVARTASGFAFSGQLAGTDAQVSSQAVDFYLHVLTGMRASGLT HHHEEEEEECCCCCCHHHHHHCCCCCEEECEECCCCHHHHHHHHHHHHHHHHCCCCCCCC ETAPEDLPPPQLRISVWRQGAARPEEVLIYHTGNGGSSFLCQASRQPGFVLLEDDRVDKL CCCCCCCCCCCEEHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEECCCHHHH SRSAFDMSERPVLSRPLNGVEGQKITLRRDGVETTFLLGRKEQGWRDLVTGGTVLGLDVI HHHHCCCCCCCHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHCCCEEEHHHHH TYGLGSLQYEFPPQDTPPEQAVPWLVWELYGEGGAAALALYFYKDPALPAGFCRVRVDDT HHCCCCEEEECCCCCCCHHHCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEECCC GPWFTVGTRLVDDMLSRVPAPAPDPVMPQTEPPSAPSSAAANATEQANGQ CCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA