Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
---|---|
Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is rocA [H]
Identifier: 78224695
GI number: 78224695
Start: 3943821
End: 3946832
Strand: Direct
Name: rocA [H]
Synonym: Gmet_3512
Alternate gene names: 78224695
Gene position: 3943821-3946832 (Clockwise)
Preceding gene: 78224693
Following gene: 78224698
Centisome position: 98.66
GC content: 65.9
Gene sequence:
>3012_bases ATGCACAGCAGCGAACTGAACGCCAGAATCGTCAGCCGCGGCAAGGAATTTTTCACCAGCATCGCCGGCGAGAAGCCGTC CCTCTTCGACAAGGGGGCCTGGATGGGAAAGGCCATGGACTGGAGCATGCGGAACGACCAGTTCAAGGTCCAGCTGTTCC GGTTCGTGGACGTGTTCCCCTCCCTCACCACCAGCAGGCTCCTGACGGAGCACATCCGCGAGTACTTCGGGGATGAGGAG GCAATGCCCCCGTTCATGGCCACTGGGGCCAAGGTGGCGGGGATGCTCGGCTCCTTCGGCGGCGCCGTGCTGAACCGGGT GCTCACCTCCAATGTCGAGGATATGGCCCGCCAGTTCATCGTGGGTGAAACCACGAAGGAGGCGGTGAAGAACCTGGAAA AACTCCGGAAAGACGGCTTCGCCGCCGTGGTGGATGTCCTCGGCGAGGCGACTCTTTCGGAGGAGGAGGCCGAGGCCTAC ACGAACACGTACCTGGAGCTTCTGGAGACGCTGAAGAAGGAGCAGGGAACCTGGAAGGGACTACCGGGCACGGGGGGCGA TCCGGATCTCGACTGGGGCCACGCCCCCAGGGTGAATATCGCGGTAAAGCCCACGGCCCTCTACTGTCTCGCCAATCCCC AGGATTTCGAGGGGTCGGTGGTCGCCATCCTGAACCGGATGCGCCGCATCTTCCGGAAGGTCATGGCGCTAAACGGCTTC CTCTGTATCGACATGGAATCGTACCGCTTCAAGGACATGACTCTGGAGGTCTTTCGCCGCCTCAGGCTGGAGCATCCGGG CTATCCCCACCTGGGGATCGCGCTCCAGGCCTACCAGAAGGATACGGACCGGGACCTGGACGGCCTCCTGGCCTGGGCGA AGGAGCAGGGGGTCCCGATCTCCATCCGCCTCGTGAAGGGGGCCTACTGGGACTACGAGACCGTCCGGGCCCGGCAGAAC GGCTGGGAGGTGCCGGTATGGACCATCAAGGCCGAAACCGATGCCGCCTTCGAGCGCCAGTCCCGAAAGATTCTGGAAAA CCACGCCGTCTGCCACTTCGCCTGCGGCTCCCACAACATCCGCACCATTTCGGCGGTCATGGAGCTGGCGCGGGAACTGA ACGTCCCCCCTGACCGCTACGAGTTCCAGGTCCTCTACGGCATGGCCGAGCCGGTCCGCAAGGGGATCCTCAGGGTTGCG GGGCGCATCCGCCTCTACTGTCCCTACGGGAGCATGGTGCCGGGGATGGGGTACCTGGTGCGCCGGCTCCTGGAGAACAC CGCCAACGAATCGTTTCTGCGCAAGAGCTTTGCCGAGGAGGCCCGGATCGAACAGCTCCTGGAAGACCCGGCCGTGGCGG CGGAGCGGGAGCGGGAAGCCCGGGCCGCCAGGCCGGAAAAGGAGCGGACGGGCCCCGACGGTCTCCCCCCCTTCGGGAAC GAGCCGATGGTGGATTTCACCCGGCCCGACCACCGCGCCGCCTTTCCGGATGCGTTGGCCCGGGTGCGGACTCAACGTGG AAAAACCTATCCCCTCTTCATCAACGGTAAAGAGGTCCTGACCGCCGAACTCATGCCGACCGTGAACCCCAACAACCCCT CCGAGGTCCTGGGGCAGATCTGCCAGGCCGGGACAAAGGAGGCGGGGGATGCCGTCGCCGCAGCCAAGGCCGCCTTTCCG GCGTGGCGCGACACCGATCCCCGGACCCGCGCCGACTATCTCCTCAAGGCAGCTCTGATAGCCCGCACGCGGATTTTCGA CCTCTCCGCCTGGCAGATCCTCGAAATCGGCAAGCAGTGGGACCAGGCCTATGCCGACGTGACCGAGGCCATTGATTTTC TGGAATACTACGCCCGGGAGATGATGCGGTTGGGAGAGCCCCAACGGCTCGGCCACGCACCGGGGGAGCTGAACCATTAC TGCTACGAGCCCCGGGGAGTGGCCGCGGTCATCGCCCCCTGGAACTTCCCCCTGGCCATCAGCACGGGGATGGCTGCGGC GGCAATCGTCACCGGCAACTGCGTGGTCTACAAGCCGTCGGGCCTCACCCCCATCGTCGGCTGGCACCTGGCGGAGCTCT TCCGGGAGGCGAGGCTCCCCGACGGGGTCTTCAACTACGTGCCGGGGCGGAGCTCGGTCATGGGAGACTACTTGGTGGAC CACCCGGACGTGAGCCTCATCGCCTTCACCGGCTCCCTGGAGACGGGCTTGAGGATCAACGAGCGGGCCGCCAGGGTCCA GCCTGGTCAGGCCAACGTGAAACGGGTCATCTGCGAGATGGGGGGGAAGAACGCCATCATCATCGACGACGACGCGGACC TGGACGAGGCGGTCCCCCAGGTGCTCTCATCGGCCTTCGGGTTCCAGGGGCAGAAGTGCTCGGCCTGCTCCCGGGTCATC GTGCTGGACGCCATCCATGACCGGTTCGTGGCGCGGCTCGTGGCCATGGCCCGGGCCATCTCGGTGGGTCCGCCGGAGGA CCCGGCCCACTCCATGGGGGCCGTGGCCGACGACAACGCCATGAAGAGGATCAGGGAGTACATTGAAATCGGGAAAACGG AGGGGCAGCTCCTCCACGAAGGGCCGGTGCCGGCCGGCACCGGGTACTACGTCCCCATGACCATCATCGGCGGCATCCGG CCCGAGCACTGCATCGCCCGGGAGGAGATCTTCGGCCCGGTGCTGGCGGTCATGCGGGCCAAGGACTTCGATGAGGCCAT CCAATGGGCAAACGCCCCCCGGTTTGCCCTCACGGGAGGGGTCTTCAGCCGCAGCCCCGAGCACCTGGCAAAGGCGAGGC GGGAGTTTCGGGTGGGAAACCTCTACCTCAACCGCGGCATCACCGGCGCCCTCGTGGAGCGGCAACCCTTTGGCGGCTCC CGCATGTCGGGGGGAGGGACCAAGGCGGGGGGACCTGACTACCTCCTCCACTTCATGGACCCGCGAACGGTGACCGAGAA CACCATGCGGCGCGGCTTCGCGCCGAGCGACGAGGAGAGCGGCCGCCTTTAA
Upstream 100 bases:
>100_bases ATGGTTGTACCCTTTTATAGCATCTCACCGGGTTTTTTAAAAAGACAGACTACGCGACACCACGAGCTTCGCCCCGGTGG CCCTCACGAAGGAGCACAGC
Downstream 100 bases:
>100_bases AACTCAGAAGGCAAACCCCACCTTAAGCCCGACATGGTGCGCCACGGAATCGGGCTGGAAGGCACCGGAGGCTACCAGGA CCGCACCTGCGGAACCGGAA
Product: L-proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase
Products: NA
Alternate protein names: P5C dehydrogenase [H]
Number of amino acids: Translated: 1003; Mature: 1003
Protein sequence:
>1003_residues MHSSELNARIVSRGKEFFTSIAGEKPSLFDKGAWMGKAMDWSMRNDQFKVQLFRFVDVFPSLTTSRLLTEHIREYFGDEE AMPPFMATGAKVAGMLGSFGGAVLNRVLTSNVEDMARQFIVGETTKEAVKNLEKLRKDGFAAVVDVLGEATLSEEEAEAY TNTYLELLETLKKEQGTWKGLPGTGGDPDLDWGHAPRVNIAVKPTALYCLANPQDFEGSVVAILNRMRRIFRKVMALNGF LCIDMESYRFKDMTLEVFRRLRLEHPGYPHLGIALQAYQKDTDRDLDGLLAWAKEQGVPISIRLVKGAYWDYETVRARQN GWEVPVWTIKAETDAAFERQSRKILENHAVCHFACGSHNIRTISAVMELARELNVPPDRYEFQVLYGMAEPVRKGILRVA GRIRLYCPYGSMVPGMGYLVRRLLENTANESFLRKSFAEEARIEQLLEDPAVAAEREREARAARPEKERTGPDGLPPFGN EPMVDFTRPDHRAAFPDALARVRTQRGKTYPLFINGKEVLTAELMPTVNPNNPSEVLGQICQAGTKEAGDAVAAAKAAFP AWRDTDPRTRADYLLKAALIARTRIFDLSAWQILEIGKQWDQAYADVTEAIDFLEYYAREMMRLGEPQRLGHAPGELNHY CYEPRGVAAVIAPWNFPLAISTGMAAAAIVTGNCVVYKPSGLTPIVGWHLAELFREARLPDGVFNYVPGRSSVMGDYLVD HPDVSLIAFTGSLETGLRINERAARVQPGQANVKRVICEMGGKNAIIIDDDADLDEAVPQVLSSAFGFQGQKCSACSRVI VLDAIHDRFVARLVAMARAISVGPPEDPAHSMGAVADDNAMKRIREYIEIGKTEGQLLHEGPVPAGTGYYVPMTIIGGIR PEHCIAREEIFGPVLAVMRAKDFDEAIQWANAPRFALTGGVFSRSPEHLAKARREFRVGNLYLNRGITGALVERQPFGGS RMSGGGTKAGGPDYLLHFMDPRTVTENTMRRGFAPSDEESGRL
Sequences:
>Translated_1003_residues MHSSELNARIVSRGKEFFTSIAGEKPSLFDKGAWMGKAMDWSMRNDQFKVQLFRFVDVFPSLTTSRLLTEHIREYFGDEE AMPPFMATGAKVAGMLGSFGGAVLNRVLTSNVEDMARQFIVGETTKEAVKNLEKLRKDGFAAVVDVLGEATLSEEEAEAY TNTYLELLETLKKEQGTWKGLPGTGGDPDLDWGHAPRVNIAVKPTALYCLANPQDFEGSVVAILNRMRRIFRKVMALNGF LCIDMESYRFKDMTLEVFRRLRLEHPGYPHLGIALQAYQKDTDRDLDGLLAWAKEQGVPISIRLVKGAYWDYETVRARQN GWEVPVWTIKAETDAAFERQSRKILENHAVCHFACGSHNIRTISAVMELARELNVPPDRYEFQVLYGMAEPVRKGILRVA GRIRLYCPYGSMVPGMGYLVRRLLENTANESFLRKSFAEEARIEQLLEDPAVAAEREREARAARPEKERTGPDGLPPFGN EPMVDFTRPDHRAAFPDALARVRTQRGKTYPLFINGKEVLTAELMPTVNPNNPSEVLGQICQAGTKEAGDAVAAAKAAFP AWRDTDPRTRADYLLKAALIARTRIFDLSAWQILEIGKQWDQAYADVTEAIDFLEYYAREMMRLGEPQRLGHAPGELNHY CYEPRGVAAVIAPWNFPLAISTGMAAAAIVTGNCVVYKPSGLTPIVGWHLAELFREARLPDGVFNYVPGRSSVMGDYLVD HPDVSLIAFTGSLETGLRINERAARVQPGQANVKRVICEMGGKNAIIIDDDADLDEAVPQVLSSAFGFQGQKCSACSRVI VLDAIHDRFVARLVAMARAISVGPPEDPAHSMGAVADDNAMKRIREYIEIGKTEGQLLHEGPVPAGTGYYVPMTIIGGIR PEHCIAREEIFGPVLAVMRAKDFDEAIQWANAPRFALTGGVFSRSPEHLAKARREFRVGNLYLNRGITGALVERQPFGGS RMSGGGTKAGGPDYLLHFMDPRTVTENTMRRGFAPSDEESGRL >Mature_1003_residues MHSSELNARIVSRGKEFFTSIAGEKPSLFDKGAWMGKAMDWSMRNDQFKVQLFRFVDVFPSLTTSRLLTEHIREYFGDEE AMPPFMATGAKVAGMLGSFGGAVLNRVLTSNVEDMARQFIVGETTKEAVKNLEKLRKDGFAAVVDVLGEATLSEEEAEAY TNTYLELLETLKKEQGTWKGLPGTGGDPDLDWGHAPRVNIAVKPTALYCLANPQDFEGSVVAILNRMRRIFRKVMALNGF LCIDMESYRFKDMTLEVFRRLRLEHPGYPHLGIALQAYQKDTDRDLDGLLAWAKEQGVPISIRLVKGAYWDYETVRARQN GWEVPVWTIKAETDAAFERQSRKILENHAVCHFACGSHNIRTISAVMELARELNVPPDRYEFQVLYGMAEPVRKGILRVA GRIRLYCPYGSMVPGMGYLVRRLLENTANESFLRKSFAEEARIEQLLEDPAVAAEREREARAARPEKERTGPDGLPPFGN EPMVDFTRPDHRAAFPDALARVRTQRGKTYPLFINGKEVLTAELMPTVNPNNPSEVLGQICQAGTKEAGDAVAAAKAAFP AWRDTDPRTRADYLLKAALIARTRIFDLSAWQILEIGKQWDQAYADVTEAIDFLEYYAREMMRLGEPQRLGHAPGELNHY CYEPRGVAAVIAPWNFPLAISTGMAAAAIVTGNCVVYKPSGLTPIVGWHLAELFREARLPDGVFNYVPGRSSVMGDYLVD HPDVSLIAFTGSLETGLRINERAARVQPGQANVKRVICEMGGKNAIIIDDDADLDEAVPQVLSSAFGFQGQKCSACSRVI VLDAIHDRFVARLVAMARAISVGPPEDPAHSMGAVADDNAMKRIREYIEIGKTEGQLLHEGPVPAGTGYYVPMTIIGGIR PEHCIAREEIFGPVLAVMRAKDFDEAIQWANAPRFALTGGVFSRSPEHLAKARREFRVGNLYLNRGITGALVERQPFGGS RMSGGGTKAGGPDYLLHFMDPRTVTENTMRRGFAPSDEESGRL
Specific function: Oxidizes Proline To Glutamate For Use As A Carbon And Nitrogen Source And Also Function As A Transcriptional Repressor Of The Put Operon. [C]
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family. RocA subfamily [H]
Homologues:
Organism=Homo sapiens, GI25777732, Length=487, Percent_Identity=36.1396303901437, Blast_Score=256, Evalue=9e-68, Organism=Homo sapiens, GI21361176, Length=503, Percent_Identity=35.3876739562624, Blast_Score=253, Evalue=5e-67, Organism=Homo sapiens, GI25777730, Length=485, Percent_Identity=34.020618556701, Blast_Score=249, Evalue=1e-65, Organism=Homo sapiens, GI153266822, Length=518, Percent_Identity=34.7490347490347, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI12007648, Length=483, Percent_Identity=31.8840579710145, Blast_Score=242, Evalue=1e-63, Organism=Homo sapiens, GI25777724, Length=477, Percent_Identity=35.0104821802935, Blast_Score=234, Evalue=5e-61, Organism=Homo sapiens, GI25777736, Length=520, Percent_Identity=32.6923076923077, Blast_Score=233, Evalue=8e-61, Organism=Homo sapiens, GI25777734, Length=520, Percent_Identity=32.6923076923077, Blast_Score=233, Evalue=8e-61, Organism=Homo sapiens, GI238859541, Length=488, Percent_Identity=32.7868852459016, Blast_Score=225, Evalue=2e-58, Organism=Homo sapiens, GI115387104, Length=443, Percent_Identity=32.5056433408578, Blast_Score=224, Evalue=4e-58, Organism=Homo sapiens, GI25777728, Length=414, Percent_Identity=36.231884057971, Blast_Score=218, Evalue=3e-56, Organism=Homo sapiens, GI21614513, Length=490, Percent_Identity=33.6734693877551, Blast_Score=209, Evalue=8e-54, Organism=Homo sapiens, GI238814322, Length=487, Percent_Identity=29.3634496919918, Blast_Score=200, Evalue=6e-51, Organism=Homo sapiens, GI11095441, Length=487, Percent_Identity=31.211498973306, Blast_Score=199, Evalue=1e-50, Organism=Homo sapiens, GI25777726, Length=492, Percent_Identity=31.5040650406504, Blast_Score=187, Evalue=6e-47, Organism=Homo sapiens, GI25952152, Length=475, Percent_Identity=29.0526315789474, Blast_Score=184, Evalue=4e-46, Organism=Homo sapiens, GI4507229, Length=475, Percent_Identity=30.9473684210526, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI188035924, Length=484, Percent_Identity=27.8925619834711, Blast_Score=172, Evalue=2e-42, Organism=Homo sapiens, GI310128103, Length=467, Percent_Identity=27.8372591006424, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI310128093, Length=467, Percent_Identity=27.6231263383298, Blast_Score=167, Evalue=5e-41, Organism=Homo sapiens, GI25777721, Length=488, Percent_Identity=29.9180327868852, Blast_Score=165, Evalue=2e-40, Organism=Homo sapiens, GI301500698, Length=289, Percent_Identity=33.5640138408304, Blast_Score=157, Evalue=4e-38, Organism=Homo sapiens, GI310128091, Length=467, Percent_Identity=26.9807280513919, Blast_Score=155, Evalue=2e-37, Organism=Homo sapiens, GI310128089, Length=333, Percent_Identity=27.6276276276276, Blast_Score=126, Evalue=1e-28, Organism=Homo sapiens, GI206597441, Length=433, Percent_Identity=25.635103926097, Blast_Score=125, Evalue=3e-28, Organism=Homo sapiens, GI206597439, Length=433, Percent_Identity=25.635103926097, Blast_Score=125, Evalue=3e-28, Organism=Homo sapiens, GI22907049, Length=433, Percent_Identity=25.635103926097, Blast_Score=125, Evalue=3e-28, Organism=Homo sapiens, GI310128097, Length=250, Percent_Identity=31.6, Blast_Score=116, Evalue=9e-26, Organism=Homo sapiens, GI4502043, Length=330, Percent_Identity=28.1818181818182, Blast_Score=115, Evalue=3e-25, Organism=Homo sapiens, GI238814371, Length=330, Percent_Identity=28.1818181818182, Blast_Score=115, Evalue=3e-25, Organism=Homo sapiens, GI71773324, Length=330, Percent_Identity=28.1818181818182, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI73695881, Length=330, Percent_Identity=27.8787878787879, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI73695879, Length=330, Percent_Identity=27.8787878787879, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI310128087, Length=295, Percent_Identity=27.1186440677966, Blast_Score=107, Evalue=6e-23, Organism=Homo sapiens, GI310128095, Length=309, Percent_Identity=26.537216828479, Blast_Score=103, Evalue=6e-22, Organism=Homo sapiens, GI4557303, Length=336, Percent_Identity=25.8928571428571, Blast_Score=103, Evalue=8e-22, Organism=Homo sapiens, GI73466520, Length=333, Percent_Identity=25.8258258258258, Blast_Score=103, Evalue=1e-21, Organism=Homo sapiens, GI223972651, Length=495, Percent_Identity=25.8585858585859, Blast_Score=80, Evalue=1e-14, Organism=Homo sapiens, GI183227691, Length=221, Percent_Identity=27.6018099547511, Blast_Score=74, Evalue=7e-13, Organism=Homo sapiens, GI310128099, Length=240, Percent_Identity=25.4166666666667, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI310128101, Length=240, Percent_Identity=25.4166666666667, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI1787250, Length=916, Percent_Identity=31.5502183406114, Blast_Score=397, Evalue=1e-111, Organism=Escherichia coli, GI1789015, Length=469, Percent_Identity=32.1961620469083, Blast_Score=219, Evalue=8e-58, Organism=Escherichia coli, GI1787558, Length=479, Percent_Identity=33.6116910229645, Blast_Score=218, Evalue=2e-57, Organism=Escherichia coli, GI1787715, Length=486, Percent_Identity=30.8641975308642, Blast_Score=213, Evalue=4e-56, Organism=Escherichia coli, GI1787684, Length=440, Percent_Identity=32.7272727272727, Blast_Score=210, Evalue=5e-55, Organism=Escherichia coli, GI87081896, Length=498, Percent_Identity=29.5180722891566, Blast_Score=197, Evalue=3e-51, Organism=Escherichia coli, GI1786504, Length=470, Percent_Identity=31.063829787234, Blast_Score=197, Evalue=4e-51, Organism=Escherichia coli, GI87082295, Length=480, Percent_Identity=32.5, Blast_Score=194, Evalue=2e-50, Organism=Escherichia coli, GI1788042, Length=464, Percent_Identity=34.2672413793103, Blast_Score=182, Evalue=1e-46, Organism=Escherichia coli, GI87081926, Length=443, Percent_Identity=28.6681715575621, Blast_Score=170, Evalue=4e-43, Organism=Escherichia coli, GI1787653, Length=304, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17562198, Length=537, Percent_Identity=33.5195530726257, Blast_Score=244, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17534447, Length=530, Percent_Identity=31.5094339622642, Blast_Score=238, Evalue=9e-63, Organism=Caenorhabditis elegans, GI25144435, Length=486, Percent_Identity=34.5679012345679, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI25143874, Length=447, Percent_Identity=32.8859060402685, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI25143876, Length=447, Percent_Identity=32.8859060402685, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI133930964, Length=485, Percent_Identity=32.5773195876289, Blast_Score=218, Evalue=2e-56, Organism=Caenorhabditis elegans, GI115532534, Length=411, Percent_Identity=34.0632603406326, Blast_Score=215, Evalue=1e-55, Organism=Caenorhabditis elegans, GI32564736, Length=415, Percent_Identity=35.1807228915663, Blast_Score=213, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17551164, Length=509, Percent_Identity=30.8447937131631, Blast_Score=212, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17534119, Length=465, Percent_Identity=31.6129032258064, Blast_Score=196, Evalue=5e-50, Organism=Caenorhabditis elegans, GI71986308, Length=463, Percent_Identity=31.9654427645788, Blast_Score=195, Evalue=9e-50, Organism=Caenorhabditis elegans, GI71995606, Length=467, Percent_Identity=31.6916488222698, Blast_Score=186, Evalue=8e-47, Organism=Caenorhabditis elegans, GI32564151, Length=468, Percent_Identity=29.0598290598291, Blast_Score=181, Evalue=2e-45, Organism=Caenorhabditis elegans, GI71995613, Length=424, Percent_Identity=32.7830188679245, Blast_Score=178, Evalue=1e-44, Organism=Caenorhabditis elegans, GI115534176, Length=486, Percent_Identity=28.3950617283951, Blast_Score=172, Evalue=9e-43, Organism=Caenorhabditis elegans, GI71990744, Length=356, Percent_Identity=27.8089887640449, Blast_Score=130, Evalue=4e-30, Organism=Caenorhabditis elegans, GI25146391, Length=358, Percent_Identity=25.9776536312849, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI32566756, Length=358, Percent_Identity=25.9776536312849, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI25146394, Length=358, Percent_Identity=25.9776536312849, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17564084, Length=384, Percent_Identity=23.1770833333333, Blast_Score=94, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6321826, Length=504, Percent_Identity=33.1349206349206, Blast_Score=232, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6323821, Length=474, Percent_Identity=32.4894514767932, Blast_Score=231, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6325196, Length=480, Percent_Identity=31.4583333333333, Blast_Score=230, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6320917, Length=466, Percent_Identity=32.4034334763949, Blast_Score=228, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6323822, Length=474, Percent_Identity=31.6455696202532, Blast_Score=222, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6324950, Length=482, Percent_Identity=31.1203319502075, Blast_Score=219, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6319478, Length=460, Percent_Identity=28.2608695652174, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6321828, Length=490, Percent_Identity=27.3469387755102, Blast_Score=143, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6323757, Length=323, Percent_Identity=26.0061919504644, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24668425, Length=526, Percent_Identity=34.0304182509506, Blast_Score=250, Evalue=4e-66, Organism=Drosophila melanogaster, GI24668417, Length=526, Percent_Identity=34.0304182509506, Blast_Score=250, Evalue=4e-66, Organism=Drosophila melanogaster, GI24668413, Length=526, Percent_Identity=34.0304182509506, Blast_Score=250, Evalue=4e-66, Organism=Drosophila melanogaster, GI20129399, Length=471, Percent_Identity=34.1825902335456, Blast_Score=233, Evalue=6e-61, Organism=Drosophila melanogaster, GI24650465, Length=486, Percent_Identity=33.7448559670782, Blast_Score=233, Evalue=7e-61, Organism=Drosophila melanogaster, GI281362580, Length=474, Percent_Identity=29.957805907173, Blast_Score=211, Evalue=3e-54, Organism=Drosophila melanogaster, GI62472918, Length=474, Percent_Identity=29.957805907173, Blast_Score=211, Evalue=3e-54, Organism=Drosophila melanogaster, GI62472926, Length=474, Percent_Identity=29.957805907173, Blast_Score=211, Evalue=3e-54, Organism=Drosophila melanogaster, GI62472936, Length=474, Percent_Identity=29.957805907173, Blast_Score=211, Evalue=3e-54, Organism=Drosophila melanogaster, GI21356737, Length=474, Percent_Identity=29.957805907173, Blast_Score=211, Evalue=3e-54, Organism=Drosophila melanogaster, GI24585660, Length=497, Percent_Identity=30.9859154929577, Blast_Score=206, Evalue=6e-53, Organism=Drosophila melanogaster, GI28571798, Length=548, Percent_Identity=28.1021897810219, Blast_Score=177, Evalue=4e-44, Organism=Drosophila melanogaster, GI28571796, Length=548, Percent_Identity=28.1021897810219, Blast_Score=177, Evalue=4e-44, Organism=Drosophila melanogaster, GI28571794, Length=548, Percent_Identity=28.1021897810219, Blast_Score=177, Evalue=4e-44, Organism=Drosophila melanogaster, GI28571802, Length=579, Percent_Identity=27.979274611399, Blast_Score=177, Evalue=4e-44, Organism=Drosophila melanogaster, GI28571800, Length=579, Percent_Identity=27.979274611399, Blast_Score=177, Evalue=4e-44, Organism=Drosophila melanogaster, GI28571806, Length=549, Percent_Identity=28.2331511839709, Blast_Score=177, Evalue=4e-44, Organism=Drosophila melanogaster, GI24666674, Length=480, Percent_Identity=27.7083333333333, Blast_Score=169, Evalue=1e-41, Organism=Drosophila melanogaster, GI24638876, Length=454, Percent_Identity=31.2775330396476, Blast_Score=165, Evalue=2e-40, Organism=Drosophila melanogaster, GI24638878, Length=454, Percent_Identity=31.2775330396476, Blast_Score=165, Evalue=2e-40, Organism=Drosophila melanogaster, GI28574525, Length=541, Percent_Identity=24.7689463955638, Blast_Score=150, Evalue=3e-36, Organism=Drosophila melanogaster, GI45552499, Length=333, Percent_Identity=27.9279279279279, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI281360303, Length=333, Percent_Identity=27.9279279279279, Blast_Score=107, Evalue=5e-23, Organism=Drosophila melanogaster, GI281360299, Length=333, Percent_Identity=27.027027027027, Blast_Score=100, Evalue=5e-21, Organism=Drosophila melanogaster, GI281360297, Length=333, Percent_Identity=27.027027027027, Blast_Score=100, Evalue=5e-21, Organism=Drosophila melanogaster, GI281360295, Length=333, Percent_Identity=27.027027027027, Blast_Score=100, Evalue=5e-21, Organism=Drosophila melanogaster, GI24586250, Length=333, Percent_Identity=27.027027027027, Blast_Score=100, Evalue=5e-21, Organism=Drosophila melanogaster, GI281360301, Length=333, Percent_Identity=27.027027027027, Blast_Score=100, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016160 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR005932 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.5.1.12 [H]
Molecular weight: Translated: 111301; Mature: 111301
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSSELNARIVSRGKEFFTSIAGEKPSLFDKGAWMGKAMDWSMRNDQFKVQLFRFVDVFP CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SLTTSRLLTEHIREYFGDEEAMPPFMATGAKVAGMLGSFGGAVLNRVLTSNVEDMARQFI HHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VGETTKEAVKNLEKLRKDGFAAVVDVLGEATLSEEEAEAYTNTYLELLETLKKEQGTWKG CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC LPGTGGDPDLDWGHAPRVNIAVKPTALYCLANPQDFEGSVVAILNRMRRIFRKVMALNGF CCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCE LCIDMESYRFKDMTLEVFRRLRLEHPGYPHLGIALQAYQKDTDRDLDGLLAWAKEQGVPI EEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCE SIRLVKGAYWDYETVRARQNGWEVPVWTIKAETDAAFERQSRKILENHAVCHFACGSHNI EEEEECCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCH RTISAVMELARELNVPPDRYEFQVLYGMAEPVRKGILRVAGRIRLYCPYGSMVPGMGYLV HHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHH RRLLENTANESFLRKSFAEEARIEQLLEDPAVAAEREREARAARPEKERTGPDGLPPFGN HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCC EPMVDFTRPDHRAAFPDALARVRTQRGKTYPLFINGKEVLTAELMPTVNPNNPSEVLGQI CCCEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHH CQAGTKEAGDAVAAAKAAFPAWRDTDPRTRADYLLKAALIARTRIFDLSAWQILEIGKQW HHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH DQAYADVTEAIDFLEYYAREMMRLGEPQRLGHAPGELNHYCYEPRGVAAVIAPWNFPLAI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEECCCCCEEEEECCCCCEEE STGMAAAAIVTGNCVVYKPSGLTPIVGWHLAELFREARLPDGVFNYVPGRSSVMGDYLVD ECCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHCCCHHCC HPDVSLIAFTGSLETGLRINERAARVQPGQANVKRVICEMGGKNAIIIDDDADLDEAVPQ CCCCEEEEEECCCCCCCEECCHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH VLSSAFGFQGQKCSACSRVIVLDAIHDRFVARLVAMARAISVGPPEDPAHSMGAVADDNA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHH MKRIREYIEIGKTEGQLLHEGPVPAGTGYYVPMTIIGGIRPEHCIAREEIFGPVLAVMRA HHHHHHHHHCCCCCCCEEECCCCCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHH KDFDEAIQWANAPRFALTGGVFSRSPEHLAKARREFRVGNLYLNRGITGALVERQPFGGS CCHHHHHHHCCCCCEEEECCHHCCCHHHHHHHHHHHHHCEEEECCCCCEEEEECCCCCCC RMSGGGTKAGGPDYLLHFMDPRTVTENTMRRGFAPSDEESGRL CCCCCCCCCCCHHHEEEECCCCHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MHSSELNARIVSRGKEFFTSIAGEKPSLFDKGAWMGKAMDWSMRNDQFKVQLFRFVDVFP CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SLTTSRLLTEHIREYFGDEEAMPPFMATGAKVAGMLGSFGGAVLNRVLTSNVEDMARQFI HHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VGETTKEAVKNLEKLRKDGFAAVVDVLGEATLSEEEAEAYTNTYLELLETLKKEQGTWKG CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC LPGTGGDPDLDWGHAPRVNIAVKPTALYCLANPQDFEGSVVAILNRMRRIFRKVMALNGF CCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCE LCIDMESYRFKDMTLEVFRRLRLEHPGYPHLGIALQAYQKDTDRDLDGLLAWAKEQGVPI EEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCE SIRLVKGAYWDYETVRARQNGWEVPVWTIKAETDAAFERQSRKILENHAVCHFACGSHNI EEEEECCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCH RTISAVMELARELNVPPDRYEFQVLYGMAEPVRKGILRVAGRIRLYCPYGSMVPGMGYLV HHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHH RRLLENTANESFLRKSFAEEARIEQLLEDPAVAAEREREARAARPEKERTGPDGLPPFGN HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCC EPMVDFTRPDHRAAFPDALARVRTQRGKTYPLFINGKEVLTAELMPTVNPNNPSEVLGQI CCCEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHH CQAGTKEAGDAVAAAKAAFPAWRDTDPRTRADYLLKAALIARTRIFDLSAWQILEIGKQW HHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH DQAYADVTEAIDFLEYYAREMMRLGEPQRLGHAPGELNHYCYEPRGVAAVIAPWNFPLAI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEECCCCCEEEEECCCCCEEE STGMAAAAIVTGNCVVYKPSGLTPIVGWHLAELFREARLPDGVFNYVPGRSSVMGDYLVD ECCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHCCCHHCC HPDVSLIAFTGSLETGLRINERAARVQPGQANVKRVICEMGGKNAIIIDDDADLDEAVPQ CCCCEEEEEECCCCCCCEECCHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH VLSSAFGFQGQKCSACSRVIVLDAIHDRFVARLVAMARAISVGPPEDPAHSMGAVADDNA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHH MKRIREYIEIGKTEGQLLHEGPVPAGTGYYVPMTIIGGIRPEHCIAREEIFGPVLAVMRA HHHHHHHHHCCCCCCCEEECCCCCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHH KDFDEAIQWANAPRFALTGGVFSRSPEHLAKARREFRVGNLYLNRGITGALVERQPFGGS CCHHHHHHHCCCCCEEEECCHHCCCHHHHHHHHHHHHHCEEEECCCCCEEEEECCCCCCC RMSGGGTKAGGPDYLLHFMDPRTVTENTMRRGFAPSDEESGRL CCCCCCCCCCCHHHEEEECCCCHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA