Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78224693
Identifier: 78224693
GI number: 78224693
Start: 3942687
End: 3943280
Strand: Direct
Name: 78224693
Synonym: Gmet_3510
Alternate gene names: NA
Gene position: 3942687-3943280 (Clockwise)
Preceding gene: 78224692
Following gene: 78224695
Centisome position: 98.63
GC content: 63.64
Gene sequence:
>594_bases ATGAACCGGATCACCATGACCGTGCTGGCCGTCGTCACCCTTGCCATCCTTGGCGGTTGCGCGGGGACTGCCGAACTGGC ACGAACCGCTGCCATCGCCACGCGGCAGGATGTTTTTGTCGAAAAAGCGCAGGGGCAGTCTCTACCGCCGGGCTATGCCG AGCTTCGGGTTGTGTCGTCCCTGAAGACCCATGGGCCGGAAATCTATTCACGCAGAGACGTCCACGGCACCCCGGAATAC AAACTGCTGTTGAACATCGGGGGGCAGACTGCGGAGCTTTCAGGCGATCCCCGCCCGGAGCGCAGCGAGCCCCTCGGACT CCGCGACCCGGAGGCCGGCGAGGGGATGAGGTACCGGTTCACGCAGACCCTGTATGTCAAGGCGGGCACCCACCACATGG TGGTTGCCCTCCCCGCCGACAACGTCGCCACCGAGCGGGAGATCATCCTCCCCGAGGGGAGCAGCACCACCATCGTGTTG GAGCCGGGATACGGTACAGCATCCCCCCGAAGGCGTCCTTCGTCCTACACCGTAACCGATTTCAGGGAAGGGATCCGCGC CCTGCGCGTAGTGCTCAATGACGAGACCATTTAA
Upstream 100 bases:
>100_bases CGGTTGTCGTGGGCGGACTGGTGACGTCCACCCTGCTGACGCTTCTGGTCATTCCGTCGGTGTATGGCTGGTTTGAAAAG AGGAAGGTGGAGGAAGAGGT
Downstream 100 bases:
>100_bases GGCGCGGGAACTCAGTGGGTCCAGTCGATGATCCGGGTCTCGGGACCGACCTTTTTCTCCACGGCGCCCTTGATGGCGGC GAAATGGGGGCAGGGATACC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MNRITMTVLAVVTLAILGGCAGTAELARTAAIATRQDVFVEKAQGQSLPPGYAELRVVSSLKTHGPEIYSRRDVHGTPEY KLLLNIGGQTAELSGDPRPERSEPLGLRDPEAGEGMRYRFTQTLYVKAGTHHMVVALPADNVATEREIILPEGSSTTIVL EPGYGTASPRRRPSSYTVTDFREGIRALRVVLNDETI
Sequences:
>Translated_197_residues MNRITMTVLAVVTLAILGGCAGTAELARTAAIATRQDVFVEKAQGQSLPPGYAELRVVSSLKTHGPEIYSRRDVHGTPEY KLLLNIGGQTAELSGDPRPERSEPLGLRDPEAGEGMRYRFTQTLYVKAGTHHMVVALPADNVATEREIILPEGSSTTIVL EPGYGTASPRRRPSSYTVTDFREGIRALRVVLNDETI >Mature_197_residues MNRITMTVLAVVTLAILGGCAGTAELARTAAIATRQDVFVEKAQGQSLPPGYAELRVVSSLKTHGPEIYSRRDVHGTPEY KLLLNIGGQTAELSGDPRPERSEPLGLRDPEAGEGMRYRFTQTLYVKAGTHHMVVALPADNVATEREIILPEGSSTTIVL EPGYGTASPRRRPSSYTVTDFREGIRALRVVLNDETI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21387; Mature: 21387
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRITMTVLAVVTLAILGGCAGTAELARTAAIATRQDVFVEKAQGQSLPPGYAELRVVSS CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LKTHGPEIYSRRDVHGTPEYKLLLNIGGQTAELSGDPRPERSEPLGLRDPEAGEGMRYRF HHHCCCCHHCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE TQTLYVKAGTHHMVVALPADNVATEREIILPEGSSTTIVLEPGYGTASPRRRPSSYTVTD EEEEEEEECCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHH FREGIRALRVVLNDETI HHHHHHHHHHHHCCCCC >Mature Secondary Structure MNRITMTVLAVVTLAILGGCAGTAELARTAAIATRQDVFVEKAQGQSLPPGYAELRVVSS CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LKTHGPEIYSRRDVHGTPEYKLLLNIGGQTAELSGDPRPERSEPLGLRDPEAGEGMRYRF HHHCCCCHHCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE TQTLYVKAGTHHMVVALPADNVATEREIILPEGSSTTIVLEPGYGTASPRRRPSSYTVTD EEEEEEEECCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHH FREGIRALRVVLNDETI HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA