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The map label for this gene is bphB [H]

Identifier: 78224622

GI number: 78224622

Start: 3852174

End: 3854564

Strand: Direct

Name: bphB [H]

Synonym: Gmet_3432

Alternate gene names: 78224622

Gene position: 3852174-3854564 (Clockwise)

Preceding gene: 78224621

Following gene: 78224628

Centisome position: 96.37

GC content: 61.77

Gene sequence:

>2391_bases
ATGCGCAACCACACAACATCGAAGATTAAGACCATTGCCGCCGCCCTGCTGCTCGGCACTCTTGGCTTTGCCGTCAACTG
GCTGAACCCGTCCCTCTTCTTTGGTGTCAACATCTTCTTCGGTTCCTTCTTTGTCATGCTCGCCCTGTTCCGCTACGGGA
CGGGGGCCGGCGTCCTGGCGGCAGCCCTGGCCGCAAGCTACTCTCTGATTTTCTGGCACAGTCCCTTGGGGGTGCTGGTC
TGGGTGGGCGAGGCCCTGGTCGTGGGGCGGATGCTGCGGCGGTCCCGCAATATCGCGTTTCTCGACACCCTCTACTGGTT
CTGCCTCGGCATGCCCTTTTACCTGTTTTACCATATGGCAAGCCAGACCGACCTGTCTCTGGCCGTCCTGCTGTCACTCA
AGTATGGAGTCAACGGCATCTTTAACGCCTTGGCCGCCGCCCTGCTCCTTCATCTGGTAAACCTCTCGCAGCCCTTCAGG
CGTCCTGGCGAACAGTCAACCCACTTCCACCACCTCCTCGCGACATCCATGGTGGCAGCCATCCTCATTCCGGGTATCTG
TTACGTCGTTCTCGAAATCCGACGGGACATATCCCAGGAAGAACAACGGATCCACCAGCGGTTGCAGACCACCACGAACC
TTACCCGCCAGGTGATCGAGACCTGGCTTGCCGACAAAACCCACGACGTTCAGACCCTGGCGTCCCAGGTTGGAGACCCC
CAGACTACCCCCGCCGCCATCATCCAGAATAAGGCTAATCTGATAAAGCTGCTTTCACCCCATTTTGTGAAGATGTCAGT
GCAGAACAGCAGGGCCATCTCCGTGGCCTTCGTTCCGGCGGTGGATCAGCAGGGGCGCTCCAATGTGGGGAGAGATTACT
CCACCATGCCCTACCACCGGATCGTACGGGAAACCCTGCGTCCGGCGGTCTCTGACATCGACTACGGAACCGTGTCGAAG
GTGCCCCGGCTGGCCCTCTTCGCCCCCATTGTCATAGATGGCGAATTCCGCGGTTACTGTACCGGCACCGTCGAGATCGC
GCGCATGACGGAACAGCTGCGCATCATCGCCGACAACCGCGCCATGGACATCACCCTCCTGGACCGGAAACGGCAGGTCA
TCGCCAGCACCGACTCAGCGAGAAAAATGATGGAGCGCTTCGCCCCCGGCATGGGGAAGGAACGACGCCGGCTGTCAGAT
GGACTTTACCAGTTCATTCCCCTCACCCCGGGGGGCCGCGACCTTCAGCGCTGGCAACAGGCGTCCTTCGGCATGGATTC
TCCCCTCAATGCTGACGTGCCGTGGTCCATTGTCATCACGACGCCGATGAAACCTTTCCTGGAGGGGCTCGAGAACAACG
CCAGCCGGGGTTTTGCCCTCCTCCTCGCCCTCATCCTCTTCTCCATCGCCACCGCACACGTGGCCAGCGCAGCGTTCACC
CGCCCCATCGCCCACCTGGAGCAGATATCCGCCACCCTCCCCGTGGACGTGATACGGCACCAGGAGATTGACTGGCCCCA
CAGCGGCATTCGGGAGGTGGCGGGGCTCATCGGCAACGTCCGGCAGATGGCGGCCACGCTCCAGAGTTACGTCCACGAAC
TGCAGACCCTCAACGAATCACTGGAACAGAGGGTGATCGAGCGTACCGAGGATATCCGCCGCCTCAACGAGGAGCTGGAG
GAGCGGGTCAATGAACGGACGGCGCAGCTGAAATCGGCCCTCCTCCATATGGAGTCCTTCTCCTACTCCATCTCCCACGA
CCTGCGGGCTCCCCTGAGGGCAGTGAACGGCTACGCCACCATCCTGCTGGAGGATTTCGCACCGCACCTCCCGGCCGAGG
CCCAACGGTATCTCGGCCAGATCGCCGGCAACGGCATCAGGATGGCCGCCCTCATCGACGACCTCCTGACCTTCTCGCGC
CTCAGCCGCCACCCCCTGAAGAGGGAGAACGTGGATCCTGCCGCCGTGGTCCGCGACGTTCTGGAAGAGTTGGAAGGGGA
ACGGGCGGGACGCACGGTGCAGGTTACGGTGGGAGAGCTCCCCCCCTGCCAGGCGGACCCCTCCCTCATCCGACAGGTCT
TCGCGAATCTTCTCTCCAATGCCTTCAAATACAGCCGCAAACGGGAGGATGCCCGGATAGAGGTGGGGAGTTTCAAAAAG
GACGGGGCAACGGTCTACTTTGTGCGGGACAACGGGGACGGCTTCGACATGGCGTACGCCGACAAGCTCTTCGGTGTCTT
CCAGCGTCTCCACCGCAGTGAGGATTTCGAGGGGACCGGCGTGGGGCTCGCCATCGTCCACAACATCGTCACCCGCCACG
GGGGAACGGTCTGGGCCGAAAGCGCGGCTGGCAAGGGGGCAACCTTCTTCTTTACCCTTGCTGAGGGGTAA

Upstream 100 bases:

>100_bases
AGTGTACAAAGTTTTTTATGTCCCTGACACCGGCGTCACGCTTATAATCCTCCAGAGGTTCACCTTGTTTCGTTCCGTCA
GGGAGGGGCATCTCTCGGCA

Downstream 100 bases:

>100_bases
CTGAATGAATTCAAGGAGTCAGAATTCAGGAGAAAGGCAACACGTTCTCCCTCTGCTTCGCCATCAAACGGCCAGCCCCC
TGAACCGCTCCACGGCCTCG

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 796; Mature: 796

Protein sequence:

>796_residues
MRNHTTSKIKTIAAALLLGTLGFAVNWLNPSLFFGVNIFFGSFFVMLALFRYGTGAGVLAAALAASYSLIFWHSPLGVLV
WVGEALVVGRMLRRSRNIAFLDTLYWFCLGMPFYLFYHMASQTDLSLAVLLSLKYGVNGIFNALAAALLLHLVNLSQPFR
RPGEQSTHFHHLLATSMVAAILIPGICYVVLEIRRDISQEEQRIHQRLQTTTNLTRQVIETWLADKTHDVQTLASQVGDP
QTTPAAIIQNKANLIKLLSPHFVKMSVQNSRAISVAFVPAVDQQGRSNVGRDYSTMPYHRIVRETLRPAVSDIDYGTVSK
VPRLALFAPIVIDGEFRGYCTGTVEIARMTEQLRIIADNRAMDITLLDRKRQVIASTDSARKMMERFAPGMGKERRRLSD
GLYQFIPLTPGGRDLQRWQQASFGMDSPLNADVPWSIVITTPMKPFLEGLENNASRGFALLLALILFSIATAHVASAAFT
RPIAHLEQISATLPVDVIRHQEIDWPHSGIREVAGLIGNVRQMAATLQSYVHELQTLNESLEQRVIERTEDIRRLNEELE
ERVNERTAQLKSALLHMESFSYSISHDLRAPLRAVNGYATILLEDFAPHLPAEAQRYLGQIAGNGIRMAALIDDLLTFSR
LSRHPLKRENVDPAAVVRDVLEELEGERAGRTVQVTVGELPPCQADPSLIRQVFANLLSNAFKYSRKREDARIEVGSFKK
DGATVYFVRDNGDGFDMAYADKLFGVFQRLHRSEDFEGTGVGLAIVHNIVTRHGGTVWAESAAGKGATFFFTLAEG

Sequences:

>Translated_796_residues
MRNHTTSKIKTIAAALLLGTLGFAVNWLNPSLFFGVNIFFGSFFVMLALFRYGTGAGVLAAALAASYSLIFWHSPLGVLV
WVGEALVVGRMLRRSRNIAFLDTLYWFCLGMPFYLFYHMASQTDLSLAVLLSLKYGVNGIFNALAAALLLHLVNLSQPFR
RPGEQSTHFHHLLATSMVAAILIPGICYVVLEIRRDISQEEQRIHQRLQTTTNLTRQVIETWLADKTHDVQTLASQVGDP
QTTPAAIIQNKANLIKLLSPHFVKMSVQNSRAISVAFVPAVDQQGRSNVGRDYSTMPYHRIVRETLRPAVSDIDYGTVSK
VPRLALFAPIVIDGEFRGYCTGTVEIARMTEQLRIIADNRAMDITLLDRKRQVIASTDSARKMMERFAPGMGKERRRLSD
GLYQFIPLTPGGRDLQRWQQASFGMDSPLNADVPWSIVITTPMKPFLEGLENNASRGFALLLALILFSIATAHVASAAFT
RPIAHLEQISATLPVDVIRHQEIDWPHSGIREVAGLIGNVRQMAATLQSYVHELQTLNESLEQRVIERTEDIRRLNEELE
ERVNERTAQLKSALLHMESFSYSISHDLRAPLRAVNGYATILLEDFAPHLPAEAQRYLGQIAGNGIRMAALIDDLLTFSR
LSRHPLKRENVDPAAVVRDVLEELEGERAGRTVQVTVGELPPCQADPSLIRQVFANLLSNAFKYSRKREDARIEVGSFKK
DGATVYFVRDNGDGFDMAYADKLFGVFQRLHRSEDFEGTGVGLAIVHNIVTRHGGTVWAESAAGKGATFFFTLAEG
>Mature_796_residues
MRNHTTSKIKTIAAALLLGTLGFAVNWLNPSLFFGVNIFFGSFFVMLALFRYGTGAGVLAAALAASYSLIFWHSPLGVLV
WVGEALVVGRMLRRSRNIAFLDTLYWFCLGMPFYLFYHMASQTDLSLAVLLSLKYGVNGIFNALAAALLLHLVNLSQPFR
RPGEQSTHFHHLLATSMVAAILIPGICYVVLEIRRDISQEEQRIHQRLQTTTNLTRQVIETWLADKTHDVQTLASQVGDP
QTTPAAIIQNKANLIKLLSPHFVKMSVQNSRAISVAFVPAVDQQGRSNVGRDYSTMPYHRIVRETLRPAVSDIDYGTVSK
VPRLALFAPIVIDGEFRGYCTGTVEIARMTEQLRIIADNRAMDITLLDRKRQVIASTDSARKMMERFAPGMGKERRRLSD
GLYQFIPLTPGGRDLQRWQQASFGMDSPLNADVPWSIVITTPMKPFLEGLENNASRGFALLLALILFSIATAHVASAAFT
RPIAHLEQISATLPVDVIRHQEIDWPHSGIREVAGLIGNVRQMAATLQSYVHELQTLNESLEQRVIERTEDIRRLNEELE
ERVNERTAQLKSALLHMESFSYSISHDLRAPLRAVNGYATILLEDFAPHLPAEAQRYLGQIAGNGIRMAALIDDLLTFSR
LSRHPLKRENVDPAAVVRDVLEELEGERAGRTVQVTVGELPPCQADPSLIRQVFANLLSNAFKYSRKREDARIEVGSFKK
DGATVYFVRDNGDGFDMAYADKLFGVFQRLHRSEDFEGTGVGLAIVHNIVTRHGGTVWAESAAGKGATFFFTLAEG

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=225, Percent_Identity=28.4444444444444, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI87081816, Length=366, Percent_Identity=28.1420765027322, Blast_Score=90, Evalue=7e-19,
Organism=Escherichia coli, GI1790436, Length=228, Percent_Identity=30.7017543859649, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1786912, Length=289, Percent_Identity=30.4498269896194, Blast_Score=87, Evalue=6e-18,
Organism=Escherichia coli, GI1788549, Length=215, Percent_Identity=31.6279069767442, Blast_Score=85, Evalue=2e-17,
Organism=Escherichia coli, GI1789149, Length=319, Percent_Identity=26.3322884012539, Blast_Score=84, Evalue=4e-17,
Organism=Escherichia coli, GI145693157, Length=274, Percent_Identity=27.007299270073, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1790861, Length=205, Percent_Identity=30.7317073170732, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI1786783, Length=296, Percent_Identity=26.3513513513513, Blast_Score=76, Evalue=8e-15,
Organism=Escherichia coli, GI1786600, Length=222, Percent_Identity=28.8288288288288, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790346, Length=226, Percent_Identity=28.7610619469027, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787894, Length=214, Percent_Identity=29.4392523364486, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788713, Length=239, Percent_Identity=22.5941422594142, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 88652; Mature: 88652

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCEEEEEECCC
>Mature Secondary Structure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CCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]