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The map label for this gene is cpcE [H]

Identifier: 78223509

GI number: 78223509

Start: 2614136

End: 2616136

Strand: Reverse

Name: cpcE [H]

Synonym: Gmet_2306

Alternate gene names: 78223509

Gene position: 2616136-2614136 (Counterclockwise)

Preceding gene: 78223510

Following gene: 78223508

Centisome position: 65.45

GC content: 62.97

Gene sequence:

>2001_bases
GTGGGCGATCTTGAACACATACGTACTCAACTTACTGGTGCCGACGACGAGGAGCGTCGACAGGCCGTCATCGGCCTGGG
TCGCCATCCTCTCGCCAGGAGTCGTGAACTCTTTTTTTCAGCCATGGGGGACGGGAGCTGGCGGGTACGCAAGGAGGCGG
TCAACACGCTTCTCACCGTGCCCCTTGATGACTCAACCCTGAACGGGCTCATCGGCCTGCTTGCATCCTCCGACAACGCC
GGGCTCCGGAACTCGGCGGTGGAGGCCCTGGAGCGCCTGGAATCCCGGAGTGTGCCGCTTCTCCTTGACCACCTCAAAGA
CCCTGATCATGACGTACGGAAATTTGTCGCCGACATCCTCGGCAGCATCGGCGACCGTTCATCCATCCCATCCCTCGTGG
AAGCACTGCAGGATCCCGATGCCAACGTTTCTGCCGCAGCGGCGGAGAATCTCGGCAAGATCGGCGACCCTCGCGCGGTT
GCGCCTCTGGTTGAGGCCCTGGCAACGGGTGATGTCTGGTTCCGCTTTTCGGTTCTCGGCGCCCTTACCCGGATTGGGGA
ACCGGTTCCCATCCCGGTGTTTGCTCCCCTTGTAGCGGATCCTCTCCTGAAGCGTCCCGTCATAGAGTGCCTTGGCGCAG
TGGGAGACCGTGATGCCGTACCTGTAATCCTGGAGGGGCTCCAGGACCGTGTCCGGGCAGTCCGTGAAGCGGCGGCCTGC
GCCCTGGCGCGCCTCAGGGGGAGACTCCCCGCGGTGTACGCACGGGAGGTTGATGACCATCTCACGGGTTTCAGGGGGAA
ACCGTGCGTGGATGATCTCATCGCATCCCTTGATACCACCGATCGGCAGGTGAGAGAGTCACTTGTGGGGATTCTGGCGC
TTATCGGTGATGAGCGTGCGGCCCTGCCCCTTCTGGAGGGATGCCGCGACGAGCGGCTTCGGCGCACGTGTCTCCAGGGT
TTCCGGATTATGGGAGAGGGTGGGATGGCCGCATTGCTTGCAGCTTTCTCCAAAGCCGATGATGAGGAAAAAACCTTCAT
CATTTATCTGTGGGGAGAAATGGGCTTTGGTGGTGCGGCGCCGTATCTTGGCGAGGCCATGGCGAGTAACCGGTACTCGG
TCCGCAATGCCGCTGTGGTGGCTGCAGGTAAGATCGGCCTTACCGGGTTGCTGGATCAGATTCGAGTGCTGCTTGACGAC
AGCGAGCAAGACGTGCGCAAGGGGGCCGTGGATGCTCTTGTGCGTCTTGCCCCCACCGGCCGGGAGAAGGTGGCTGCCAT
CGCCAGGACTCTTTCCACGTCGCCCAACCCCGATAACCGACAGGATGCCGCGCGGATATTCGCGGCTCTGGCCGATCCGG
AGCGCCTTGCCCTTCTGGTGAAGGATGAGAGCCCCCTTGTGAGGCGTAGTGCTGTGACCGCTCTTGCGGGCCTGCGCCTT
CCCGAATGCCTCGGGAACCTGGTCATGGCGCTGGTGGACGAGGACCCTGATGTGCGGATCGCCGCCGCTACGGGACTCGG
TGAGATGCAGGGTGAGGGGAGCGTGGACTCTCTGATCCTTTCGCTCAACGATGAAGATCCGTGGGTCCGCTGCGCTGCCC
TCAGGAGCCTCGGCAAGATGGGCGGCGAGCGGGCGCTTGATGCCATCGAGGATCTGTTGGGCAAGGCGGATGGGGTCGTG
CTTATCACTGCGCTCGAAGCCTTGGCCGGTCTTGGGGACGACCGGGCACTTCTGCTCGTGAGAAGGGGCCTTGAGAGCAG
TGACGAGGAGGTGGTGAAATCTGCCATCGACATCCTCTCCCGCAGCGGTTCCTCCTGGATTGACGAGTACCGGGACAGCC
TTCTCCGACACCCCCACTGGGACGTGCGGTGTGCCACTGCCCGTGCCATGGCGCATCTTCTCGGCGAGGGAGCGGCCGAG
CACCTGCGCAAGGCTCTGGAAGCCGAGCAGGACGAACTCGTACGGGGTGAGCTCCGGGACCTTCTCGGAAGGTGGCGGTA
A

Upstream 100 bases:

>100_bases
TCTCACGGGCATCGGGCGCAACTCCCGCCCGATAATTCCGGAAAAAGAGGATACCCGCAGTGTGTGCGGGAATCCTGACA
GTTCGACAAGGAGACCGTCA

Downstream 100 bases:

>100_bases
TGTTCACCCTGGAACCGGAAATACCGCTATCCGATGAGGAGTTCCGCCTGATTCGGGATCTCATCTACAATCATTGTGGC
CTCTACTTTGATAGCGATGC

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: Phycocyanin operon protein CpcE [H]

Number of amino acids: Translated: 666; Mature: 665

Protein sequence:

>666_residues
MGDLEHIRTQLTGADDEERRQAVIGLGRHPLARSRELFFSAMGDGSWRVRKEAVNTLLTVPLDDSTLNGLIGLLASSDNA
GLRNSAVEALERLESRSVPLLLDHLKDPDHDVRKFVADILGSIGDRSSIPSLVEALQDPDANVSAAAAENLGKIGDPRAV
APLVEALATGDVWFRFSVLGALTRIGEPVPIPVFAPLVADPLLKRPVIECLGAVGDRDAVPVILEGLQDRVRAVREAAAC
ALARLRGRLPAVYAREVDDHLTGFRGKPCVDDLIASLDTTDRQVRESLVGILALIGDERAALPLLEGCRDERLRRTCLQG
FRIMGEGGMAALLAAFSKADDEEKTFIIYLWGEMGFGGAAPYLGEAMASNRYSVRNAAVVAAGKIGLTGLLDQIRVLLDD
SEQDVRKGAVDALVRLAPTGREKVAAIARTLSTSPNPDNRQDAARIFAALADPERLALLVKDESPLVRRSAVTALAGLRL
PECLGNLVMALVDEDPDVRIAAATGLGEMQGEGSVDSLILSLNDEDPWVRCAALRSLGKMGGERALDAIEDLLGKADGVV
LITALEALAGLGDDRALLLVRRGLESSDEEVVKSAIDILSRSGSSWIDEYRDSLLRHPHWDVRCATARAMAHLLGEGAAE
HLRKALEAEQDELVRGELRDLLGRWR

Sequences:

>Translated_666_residues
MGDLEHIRTQLTGADDEERRQAVIGLGRHPLARSRELFFSAMGDGSWRVRKEAVNTLLTVPLDDSTLNGLIGLLASSDNA
GLRNSAVEALERLESRSVPLLLDHLKDPDHDVRKFVADILGSIGDRSSIPSLVEALQDPDANVSAAAAENLGKIGDPRAV
APLVEALATGDVWFRFSVLGALTRIGEPVPIPVFAPLVADPLLKRPVIECLGAVGDRDAVPVILEGLQDRVRAVREAAAC
ALARLRGRLPAVYAREVDDHLTGFRGKPCVDDLIASLDTTDRQVRESLVGILALIGDERAALPLLEGCRDERLRRTCLQG
FRIMGEGGMAALLAAFSKADDEEKTFIIYLWGEMGFGGAAPYLGEAMASNRYSVRNAAVVAAGKIGLTGLLDQIRVLLDD
SEQDVRKGAVDALVRLAPTGREKVAAIARTLSTSPNPDNRQDAARIFAALADPERLALLVKDESPLVRRSAVTALAGLRL
PECLGNLVMALVDEDPDVRIAAATGLGEMQGEGSVDSLILSLNDEDPWVRCAALRSLGKMGGERALDAIEDLLGKADGVV
LITALEALAGLGDDRALLLVRRGLESSDEEVVKSAIDILSRSGSSWIDEYRDSLLRHPHWDVRCATARAMAHLLGEGAAE
HLRKALEAEQDELVRGELRDLLGRWR
>Mature_665_residues
GDLEHIRTQLTGADDEERRQAVIGLGRHPLARSRELFFSAMGDGSWRVRKEAVNTLLTVPLDDSTLNGLIGLLASSDNAG
LRNSAVEALERLESRSVPLLLDHLKDPDHDVRKFVADILGSIGDRSSIPSLVEALQDPDANVSAAAAENLGKIGDPRAVA
PLVEALATGDVWFRFSVLGALTRIGEPVPIPVFAPLVADPLLKRPVIECLGAVGDRDAVPVILEGLQDRVRAVREAAACA
LARLRGRLPAVYAREVDDHLTGFRGKPCVDDLIASLDTTDRQVRESLVGILALIGDERAALPLLEGCRDERLRRTCLQGF
RIMGEGGMAALLAAFSKADDEEKTFIIYLWGEMGFGGAAPYLGEAMASNRYSVRNAAVVAAGKIGLTGLLDQIRVLLDDS
EQDVRKGAVDALVRLAPTGREKVAAIARTLSTSPNPDNRQDAARIFAALADPERLALLVKDESPLVRRSAVTALAGLRLP
ECLGNLVMALVDEDPDVRIAAATGLGEMQGEGSVDSLILSLNDEDPWVRCAALRSLGKMGGERALDAIEDLLGKADGVVL
ITALEALAGLGDDRALLLVRRGLESSDEEVVKSAIDILSRSGSSWIDEYRDSLLRHPHWDVRCATARAMAHLLGEGAAEH
LRKALEAEQDELVRGELRDLLGRWR

Specific function: Required for the chromophorylation of the CpcA gene product [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcE/RpcE/PecE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 71615; Mature: 71484

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50077 HEAT_REPEAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDLEHIRTQLTGADDEERRQAVIGLGRHPLARSRELFFSAMGDGSWRVRKEAVNTLLTV
CCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEEEC
PLDDSTLNGLIGLLASSDNAGLRNSAVEALERLESRSVPLLLDHLKDPDHDVRKFVADIL
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHH
GSIGDRSSIPSLVEALQDPDANVSAAAAENLGKIGDPRAVAPLVEALATGDVWFRFSVLG
HCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
ALTRIGEPVPIPVFAPLVADPLLKRPVIECLGAVGDRDAVPVILEGLQDRVRAVREAAAC
HHHHCCCCCCCCEEHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALARLRGRLPAVYAREVDDHLTGFRGKPCVDDLIASLDTTDRQVRESLVGILALIGDERA
HHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH
ALPLLEGCRDERLRRTCLQGFRIMGEGGMAALLAAFSKADDEEKTFIIYLWGEMGFGGAA
HCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
PYLGEAMASNRYSVRNAAVVAAGKIGLTGLLDQIRVLLDDSEQDVRKGAVDALVRLAPTG
HHHHHHHHCCCCHHHHHHEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
REKVAAIARTLSTSPNPDNRQDAARIFAALADPERLALLVKDESPLVRRSAVTALAGLRL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCH
PECLGNLVMALVDEDPDVRIAAATGLGEMQGEGSVDSLILSLNDEDPWVRCAALRSLGKM
HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHC
GGERALDAIEDLLGKADGVVLITALEALAGLGDDRALLLVRRGLESSDEEVVKSAIDILS
CHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
RSGSSWIDEYRDSLLRHPHWDVRCATARAMAHLLGEGAAEHLRKALEAEQDELVRGELRD
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHH
LLGRWR
HHHCCC
>Mature Secondary Structure 
GDLEHIRTQLTGADDEERRQAVIGLGRHPLARSRELFFSAMGDGSWRVRKEAVNTLLTV
CCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEEEC
PLDDSTLNGLIGLLASSDNAGLRNSAVEALERLESRSVPLLLDHLKDPDHDVRKFVADIL
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHH
GSIGDRSSIPSLVEALQDPDANVSAAAAENLGKIGDPRAVAPLVEALATGDVWFRFSVLG
HCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
ALTRIGEPVPIPVFAPLVADPLLKRPVIECLGAVGDRDAVPVILEGLQDRVRAVREAAAC
HHHHCCCCCCCCEEHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALARLRGRLPAVYAREVDDHLTGFRGKPCVDDLIASLDTTDRQVRESLVGILALIGDERA
HHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH
ALPLLEGCRDERLRRTCLQGFRIMGEGGMAALLAAFSKADDEEKTFIIYLWGEMGFGGAA
HCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
PYLGEAMASNRYSVRNAAVVAAGKIGLTGLLDQIRVLLDDSEQDVRKGAVDALVRLAPTG
HHHHHHHHCCCCHHHHHHEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
REKVAAIARTLSTSPNPDNRQDAARIFAALADPERLALLVKDESPLVRRSAVTALAGLRL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCH
PECLGNLVMALVDEDPDVRIAAATGLGEMQGEGSVDSLILSLNDEDPWVRCAALRSLGKM
HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHC
GGERALDAIEDLLGKADGVVLITALEALAGLGDDRALLLVRRGLESSDEEVVKSAIDILS
CHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
RSGSSWIDEYRDSLLRHPHWDVRCATARAMAHLLGEGAAEHLRKALEAEQDELVRGELRD
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHH
LLGRWR
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]