Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222654
Identifier: 78222654
GI number: 78222654
Start: 1611315
End: 1611968
Strand: Direct
Name: 78222654
Synonym: Gmet_1442
Alternate gene names: NA
Gene position: 1611315-1611968 (Clockwise)
Preceding gene: 78222653
Following gene: 78222655
Centisome position: 40.31
GC content: 53.67
Gene sequence:
>654_bases ATGAAGGTCTATGCTGTAAATGGCAGCCCAAGGAAGAACTGGAACACCGCGATGTTGCTCGAACATGCGCTTTCAGGTGC TGCGTCGCAGGGGGCGGAAACGGAGCTTATCCATCTCTATGATCTCACTTTCAAGGGGTGTACGAGCTGTTTTGCCTGCA AATTGAAGGAGGGCAAGAGCTACGGCAAATGTGCCATGAAAGACGGACTCACGCCGGCCCTCGAAAAGCTCGCCACCGCT GATGCCTTCATCCTCGGCTCGCCCATCTATTTCGGAACCGTGACAGGAGAGATGCGTTCCTTCATGGAACGGCTCCTTTT CCAGTATCTGGCATACACCCGGCCACCGAGCTCACTCTTCACCAGAAATATTCCGACCGCGTTCATCTACACCATGAACG TCTCGGAAGAGATCATGAAGGAGAATCAGTACCCGATCCATATCGGGATGAACGAAAACTACCTGGCTCGGATTTTCGGT CAGGCGGAAACGCTCTGTTCCTATGAAACACTCCAGTTCGAGGATTACGACAAGGTGGTGTTCAACTACTTCGATCCCGA AGAGCGCCGGCAGCGGCGCAGGGACGTGTTCCCGGAAGATTGCAGAAAAGCTTCAGAGTTGGGCGCCCGATTGGCAAGAT CAGCCAGAGGGTAA
Upstream 100 bases:
>100_bases TGGTCTCCGGGGGTTCATACACCTCGGCTGACTGGAGTCTCTCCCCAAAGAACTGCAACGCTGATAATCCATTATCACTG ATCTCTCAAGGAGGATTTGC
Downstream 100 bases:
>100_bases AACTGAAAACATAGATTGGAGACCACATGAAACAATCACTCGGTGCCAAGACGCTGCTGTTCCCTACACCGGTCCTGATG GTGGGGACATACGACCACGC
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKVYAVNGSPRKNWNTAMLLEHALSGAASQGAETELIHLYDLTFKGCTSCFACKLKEGKSYGKCAMKDGLTPALEKLATA DAFILGSPIYFGTVTGEMRSFMERLLFQYLAYTRPPSSLFTRNIPTAFIYTMNVSEEIMKENQYPIHIGMNENYLARIFG QAETLCSYETLQFEDYDKVVFNYFDPEERRQRRRDVFPEDCRKASELGARLARSARG
Sequences:
>Translated_217_residues MKVYAVNGSPRKNWNTAMLLEHALSGAASQGAETELIHLYDLTFKGCTSCFACKLKEGKSYGKCAMKDGLTPALEKLATA DAFILGSPIYFGTVTGEMRSFMERLLFQYLAYTRPPSSLFTRNIPTAFIYTMNVSEEIMKENQYPIHIGMNENYLARIFG QAETLCSYETLQFEDYDKVVFNYFDPEERRQRRRDVFPEDCRKASELGARLARSARG >Mature_217_residues MKVYAVNGSPRKNWNTAMLLEHALSGAASQGAETELIHLYDLTFKGCTSCFACKLKEGKSYGKCAMKDGLTPALEKLATA DAFILGSPIYFGTVTGEMRSFMERLLFQYLAYTRPPSSLFTRNIPTAFIYTMNVSEEIMKENQYPIHIGMNENYLARIFG QAETLCSYETLQFEDYDKVVFNYFDPEERRQRRRDVFPEDCRKASELGARLARSARG
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 24694; Mature: 24694
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVYAVNGSPRKNWNTAMLLEHALSGAASQGAETELIHLYDLTFKGCTSCFACKLKEGKS CEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCC YGKCAMKDGLTPALEKLATADAFILGSPIYFGTVTGEMRSFMERLLFQYLAYTRPPSSLF CCCHHHHCCCCHHHHHHHHHHHHEECCCEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHH TRNIPTAFIYTMNVSEEIMKENQYPIHIGMNENYLARIFGQAETLCSYETLQFEDYDKVV HCCCCEEEEEEECCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH FNYFDPEERRQRRRDVFPEDCRKASELGARLARSARG EECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVYAVNGSPRKNWNTAMLLEHALSGAASQGAETELIHLYDLTFKGCTSCFACKLKEGKS CEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCC YGKCAMKDGLTPALEKLATADAFILGSPIYFGTVTGEMRSFMERLLFQYLAYTRPPSSLF CCCHHHHCCCCHHHHHHHHHHHHEECCCEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHH TRNIPTAFIYTMNVSEEIMKENQYPIHIGMNENYLARIFGQAETLCSYETLQFEDYDKVV HCCCCEEEEEEECCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH FNYFDPEERRQRRRDVFPEDCRKASELGARLARSARG EECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]