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The map label for this gene is ycgE [C]

Identifier: 78222630

GI number: 78222630

Start: 1586574

End: 1586924

Strand: Direct

Name: ycgE [C]

Synonym: Gmet_1418

Alternate gene names: 78222630

Gene position: 1586574-1586924 (Clockwise)

Preceding gene: 78222629

Following gene: 78222631

Centisome position: 39.69

GC content: 47.29

Gene sequence:

>351_bases
GTGGAAGCGAAGCTTCCTGATAAACAGTATTTTAGGATCGGTGAGGTTGCGCGATTGACAGCGCTCAAGACCTCAGTGCT
CCGGTTCTGGGAGACTGAGTTCAAGGATTTGAGCCCGCCCAAGAGCAGAACCGGTCAACGTCTTTACAGTAGGCAGGATA
TTGGGCTCCTCTTGGAGATAAAGCGCCTGCTCTATGTTGAGAAACTTACCATAGAAGGTGCTCGCAAGAAGCTGAAGACA
ACATCAAGAAGTGGCGAAACAATACTGACTGAATCAAATGATGTACATAGGCTGTTAAGTTTAGTGAAGGAAGTGCGGGA
CGAGTTGGAAACAATTCGCCTTATGTTGTAG

Upstream 100 bases:

>100_bases
GATGAGATTATCATTTCCGCCCGCAGGATTCTCACGTTCAAGCCCAGTCAGGTTCTCAAGTCCTCGATCAATTCCTGAGA
GGTTCTTCCCAGGAGGGAAG

Downstream 100 bases:

>100_bases
TAGTAACAGATATCGGGGCGTAGCGCAGCCTGGTAGCGCACCAGACTGGGGGTCTGGTGGTCGCTGGTTCGAATCCAGTC
GCCCCGACCATTTTCACCGT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator MerR Family Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; Transcriptional Regulator Protein; MerR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR MerR Family; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Domain-Containing Protein

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MEAKLPDKQYFRIGEVARLTALKTSVLRFWETEFKDLSPPKSRTGQRLYSRQDIGLLLEIKRLLYVEKLTIEGARKKLKT
TSRSGETILTESNDVHRLLSLVKEVRDELETIRLML

Sequences:

>Translated_116_residues
MEAKLPDKQYFRIGEVARLTALKTSVLRFWETEFKDLSPPKSRTGQRLYSRQDIGLLLEIKRLLYVEKLTIEGARKKLKT
TSRSGETILTESNDVHRLLSLVKEVRDELETIRLML
>Mature_116_residues
MEAKLPDKQYFRIGEVARLTALKTSVLRFWETEFKDLSPPKSRTGQRLYSRQDIGLLLEIKRLLYVEKLTIEGARKKLKT
TSRSGETILTESNDVHRLLSLVKEVRDELETIRLML

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13548; Mature: 13548

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAKLPDKQYFRIGEVARLTALKTSVLRFWETEFKDLSPPKSRTGQRLYSRQDIGLLLEI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHH
KRLLYVEKLTIEGARKKLKTTSRSGETILTESNDVHRLLSLVKEVRDELETIRLML
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEAKLPDKQYFRIGEVARLTALKTSVLRFWETEFKDLSPPKSRTGQRLYSRQDIGLLLEI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHH
KRLLYVEKLTIEGARKKLKTTSRSGETILTESNDVHRLLSLVKEVRDELETIRLML
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA