Click here to switch to the map view.

The map label for this gene is 78222531

Identifier: 78222531

GI number: 78222531

Start: 1477761

End: 1478177

Strand: Direct

Name: 78222531

Synonym: Gmet_1317

Alternate gene names: NA

Gene position: 1477761-1478177 (Clockwise)

Preceding gene: 78222530

Following gene: 78222532

Centisome position: 36.97

GC content: 44.12

Gene sequence:

>417_bases
GTGGAGCGCATACGGCAGAAGATAGGAAGAATCAACGAACATCTTTCTATAATTCGCGCAATCAAGGATGATTGCAGTCG
CAAATTTGCTGTTGATCCGATATATCGCGGTGCATTGCTCCACTATCTCTATCTGCTTTCTGATGGTTGCATCGTGCTGG
CAGAGTTGGTAATAAAGCATAAAGGGTTACGACTCCCTCAGTCTTATGCGGAATCGTTCGATATCCTCGGTGAGAGCAAG
GTACTTGATGAGGACTTCGCTTATCGTTTTGCGAGTATTGCCGGTTTCCGTAACTTTCTCGCCCATGACTATGAAAAGAT
TGATCAGGAAGTAATTTGTGGCGCGATAATGAACAGCCTGAATGATGTAGATATCTTCCTGCAACATATTCGTAAGTCAA
TGGGGTTAGTTGGTTGA

Upstream 100 bases:

>100_bases
TCTACGTGACCGACCATGATGCCCGAGACGACTTTGAGCTCAAGGTTCTCCATAGGTGCACGGATTTCAAATTTCAGCGT
CGATACGCCATGGGGGTTTA

Downstream 100 bases:

>100_bases
TTAAATTGCTCAAGAGCAGTTGGAAGAGAATATTGCATCATGGATAACGATTCGGTCAGAAGGATTGAGGAACAGTTCAA
GCATCACATTGGTGTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MERIRQKIGRINEHLSIIRAIKDDCSRKFAVDPIYRGALLHYLYLLSDGCIVLAELVIKHKGLRLPQSYAESFDILGESK
VLDEDFAYRFASIAGFRNFLAHDYEKIDQEVICGAIMNSLNDVDIFLQHIRKSMGLVG

Sequences:

>Translated_138_residues
MERIRQKIGRINEHLSIIRAIKDDCSRKFAVDPIYRGALLHYLYLLSDGCIVLAELVIKHKGLRLPQSYAESFDILGESK
VLDEDFAYRFASIAGFRNFLAHDYEKIDQEVICGAIMNSLNDVDIFLQHIRKSMGLVG
>Mature_138_residues
MERIRQKIGRINEHLSIIRAIKDDCSRKFAVDPIYRGALLHYLYLLSDGCIVLAELVIKHKGLRLPQSYAESFDILGESK
VLDEDFAYRFASIAGFRNFLAHDYEKIDQEVICGAIMNSLNDVDIFLQHIRKSMGLVG

Specific function: Unknown

COG id: COG2445

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15789; Mature: 15789

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIRQKIGRINEHLSIIRAIKDDCSRKFAVDPIYRGALLHYLYLLSDGCIVLAELVIKH
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KGLRLPQSYAESFDILGESKVLDEDFAYRFASIAGFRNFLAHDYEKIDQEVICGAIMNSL
CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NDVDIFLQHIRKSMGLVG
CHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MERIRQKIGRINEHLSIIRAIKDDCSRKFAVDPIYRGALLHYLYLLSDGCIVLAELVIKH
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KGLRLPQSYAESFDILGESKVLDEDFAYRFASIAGFRNFLAHDYEKIDQEVICGAIMNSL
CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NDVDIFLQHIRKSMGLVG
CHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA