Click here to switch to the map view.

The map label for this gene is yhbH [C]

Identifier: 78222498

GI number: 78222498

Start: 1444956

End: 1445501

Strand: Direct

Name: yhbH [C]

Synonym: Gmet_1284

Alternate gene names: 78222498

Gene position: 1444956-1445501 (Clockwise)

Preceding gene: 78222497

Following gene: 78222499

Centisome position: 36.15

GC content: 54.21

Gene sequence:

>546_bases
ATGCAAATTACCACAACGTTCAGGCACATGGAGCAGAGCGATGCCCTCAAGGGCTACGCTGCCGAAAAACTGGAAAGGGT
TAAGAAATATATTGACGAACCCATTACCGCACAGGTCTTCCTCACCGTGGAGAAAATCCGCCACATGGCCGAGGTGACCC
TGACCGCAAAGGGAGTCACCATCAAGGCCGCCGAAGAAACTAACGACATGTACGCTGCCATTGACGCTGTCGTGGACAAG
ATCGAGCGCCAGCTCCGGCGGTATAAGGAGCGCCTTAAGAACCACAAGCCGGCCGTCGACAATCGAGCCCTCGAAGTGCA
GAAGACCATCCTTACTGCCGAGAGTATCGACCAGCAGCAAGAGCCGGTTATTGTCCGCAGCAAGACCATAACCATCAAGC
CGATGTCCGTCGAGGAGGCGGTTATGCAGATGGATCTCCTCCACAAGGACTTCCTCGTTTTCACCGATTCCACCACCGAA
GTCATCAATGTCGTCTACCGTCGCAAGGACGGAAACTACGGTCTCATAGAGCCGTCGCGCAAATAA

Upstream 100 bases:

>100_bases
TATTTTCTTTCGACGTTTCGGGTTGAAGGTTTGCATTTTCGTGATTTAAGAGAATTAAGGGGCAGGTGACCCGAAACGCA
TCTACCGCAAGGAGGAAGTT

Downstream 100 bases:

>100_bases
AGAAGGATGCGCCGCGCCGCTGATTTGATTCGCGTGCGCGGCGCCCTTCCCTTTGCCTTGCGGCGTGGAGGGAGATCAGC
AGTTGAACACCATCAGCCTC

Product: SSU ribosomal protein S30P/sigma 54 modulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MQITTTFRHMEQSDALKGYAAEKLERVKKYIDEPITAQVFLTVEKIRHMAEVTLTAKGVTIKAAEETNDMYAAIDAVVDK
IERQLRRYKERLKNHKPAVDNRALEVQKTILTAESIDQQQEPVIVRSKTITIKPMSVEEAVMQMDLLHKDFLVFTDSTTE
VINVVYRRKDGNYGLIEPSRK

Sequences:

>Translated_181_residues
MQITTTFRHMEQSDALKGYAAEKLERVKKYIDEPITAQVFLTVEKIRHMAEVTLTAKGVTIKAAEETNDMYAAIDAVVDK
IERQLRRYKERLKNHKPAVDNRALEVQKTILTAESIDQQQEPVIVRSKTITIKPMSVEEAVMQMDLLHKDFLVFTDSTTE
VINVVYRRKDGNYGLIEPSRK
>Mature_181_residues
MQITTTFRHMEQSDALKGYAAEKLERVKKYIDEPITAQVFLTVEKIRHMAEVTLTAKGVTIKAAEETNDMYAAIDAVVDK
IERQLRRYKERLKNHKPAVDNRALEVQKTILTAESIDQQQEPVIVRSKTITIKPMSVEEAVMQMDLLHKDFLVFTDSTTE
VINVVYRRKDGNYGLIEPSRK

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=95, Percent_Identity=38.9473684210526, Blast_Score=77, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 20838; Mature: 20838

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQITTTFRHMEQSDALKGYAAEKLERVKKYIDEPITAQVFLTVEKIRHMAEVTLTAKGVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCEE
IKAAEETNDMYAAIDAVVDKIERQLRRYKERLKNHKPAVDNRALEVQKTILTAESIDQQQ
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
EPVIVRSKTITIKPMSVEEAVMQMDLLHKDFLVFTDSTTEVINVVYRRKDGNYGLIEPSR
CCEEEEEEEEEEECCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCC
K
C
>Mature Secondary Structure
MQITTTFRHMEQSDALKGYAAEKLERVKKYIDEPITAQVFLTVEKIRHMAEVTLTAKGVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCEE
IKAAEETNDMYAAIDAVVDKIERQLRRYKERLKNHKPAVDNRALEVQKTILTAESIDQQQ
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
EPVIVRSKTITIKPMSVEEAVMQMDLLHKDFLVFTDSTTEVINVVYRRKDGNYGLIEPSR
CCEEEEEEEEEEECCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA