Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
---|---|
Accession | NC_007517 |
Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is mtnN [H]
Identifier: 78222488
GI number: 78222488
Start: 1435253
End: 1436047
Strand: Reverse
Name: mtnN [H]
Synonym: Gmet_1274
Alternate gene names: 78222488
Gene position: 1436047-1435253 (Counterclockwise)
Preceding gene: 78222505
Following gene: 78222481
Centisome position: 35.92
GC content: 61.76
Gene sequence:
>795_bases TTGCCGCACGGGGTTCCCTTTGGTACAGTGCCGCCCATGGGTACTATCGGACTTATTGCGGCAATGCCCGACGAGATACG GCCTTTCCTCCGACTGGCAAGCCCTGCGGCACGCTTGCACGGCGGGAGATTCCCCATTTGGCGGTTGCGGGTCGGCAATG ATGACATCGTTCTCGTGGAATCAGGGATGGGGATCGACAGGGCGACAGCGGCAACCGATGCGCTCGTGGCTGCAGCCTCG CCGGTCGCCATCCTTTCCTTCGGTTTTGGTGGTGCCGCGTTGCCCGGCCTCAAAGTGGGAGACCTGGCGGTGGGAATGAC AAGCTGGTTTGCCGGTACGGAGGGGATTGTCCTCCGCAGGGGAATCGACCGGAACCTGGCCGAAAAGCTGGCCGAAGAGC TCAACAGGATATGCAACGGGGTCACCCGGGGTGAAATTATCACATCCGCCCGGATTCTCAAGAAGGGCGATCTGGCTCAT TCACTCCCGAACGGAATATCCTCGCCGATTCTCGACATGGAAACGGCCGCAGTGGCCGAGGCAGCCCACCGGCGCGGGAT ACCAATCGTGGCCCTTCGCGCCATCAGCGACGACGCTGAAGAAGAGCTTTCCTTCTCCCTCGACGAATTCACCGACGATG ACATGGCAATCCGCCCCCGGAAAGTGCTGGCGACCATCGCCCGAAAGCCCTGGATCATCCCCCAGCTTCTGAGGCTTGCC CGCAACTCCCGCATCGCCGGCAAACGGCTCGCCCAGGGGGTTCTGGCAACCGCAGAGTTTCTTTCCCGCGGATAA
Upstream 100 bases:
>100_bases TGGGGGCAAAAGATTTGCTGCTGCTAGGATTGTGTCCCTTCGGCAGGTGGGACGGATAACGCTACCTCAAAGGCCGTAGC GTGTCAAGGGATGAAATGCG
Downstream 100 bases:
>100_bases GGGGCGGGACAGTCCCTCCGTCTATCCCTTGCGGGCCGATGCGACAGACCAGGGGAAGTCCCTCAGATGTTCCGCCAGTT CCTCCTTACGGTATCGGTTA
Product: purine phosphorylase family protein 1
Products: NA
Alternate protein names: MTA/SAH nucleosidase; MTAN; 5'-methylthioadenosine nucleosidase; MTA nucleosidase; S-adenosylhomocysteine nucleosidase; AdoHcy nucleosidase; SAH nucleosidase; SRH nucleosidase [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MPHGVPFGTVPPMGTIGLIAAMPDEIRPFLRLASPAARLHGGRFPIWRLRVGNDDIVLVESGMGIDRATAATDALVAAAS PVAILSFGFGGAALPGLKVGDLAVGMTSWFAGTEGIVLRRGIDRNLAEKLAEELNRICNGVTRGEIITSARILKKGDLAH SLPNGISSPILDMETAAVAEAAHRRGIPIVALRAISDDAEEELSFSLDEFTDDDMAIRPRKVLATIARKPWIIPQLLRLA RNSRIAGKRLAQGVLATAEFLSRG
Sequences:
>Translated_264_residues MPHGVPFGTVPPMGTIGLIAAMPDEIRPFLRLASPAARLHGGRFPIWRLRVGNDDIVLVESGMGIDRATAATDALVAAAS PVAILSFGFGGAALPGLKVGDLAVGMTSWFAGTEGIVLRRGIDRNLAEKLAEELNRICNGVTRGEIITSARILKKGDLAH SLPNGISSPILDMETAAVAEAAHRRGIPIVALRAISDDAEEELSFSLDEFTDDDMAIRPRKVLATIARKPWIIPQLLRLA RNSRIAGKRLAQGVLATAEFLSRG >Mature_263_residues PHGVPFGTVPPMGTIGLIAAMPDEIRPFLRLASPAARLHGGRFPIWRLRVGNDDIVLVESGMGIDRATAATDALVAAASP VAILSFGFGGAALPGLKVGDLAVGMTSWFAGTEGIVLRRGIDRNLAEKLAEELNRICNGVTRGEIITSARILKKGDLAHS LPNGISSPILDMETAAVAEAAHRRGIPIVALRAISDDAEEELSFSLDEFTDDDMAIRPRKVLATIARKPWIIPQLLRLAR NSRIAGKRLAQGVLATAEFLSRG
Specific function: Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010049 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.9 [H]
Molecular weight: Translated: 28063; Mature: 27932
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHGVPFGTVPPMGTIGLIAAMPDEIRPFLRLASPAARLHGGRFPIWRLRVGNDDIVLVE CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCEEEEE SGMGIDRATAATDALVAAASPVAILSFGFGGAALPGLKVGDLAVGMTSWFAGTEGIVLRR CCCCCCHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCEECHHHHHHHHHHCCCCCEEEEC GIDRNLAEKLAEELNRICNGVTRGEIITSARILKKGDLAHSLPNGISSPILDMETAAVAE CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHH AAHRRGIPIVALRAISDDAEEELSFSLDEFTDDDMAIRPRKVLATIARKPWIIPQLLRLA HHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH RNSRIAGKRLAQGVLATAEFLSRG HCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PHGVPFGTVPPMGTIGLIAAMPDEIRPFLRLASPAARLHGGRFPIWRLRVGNDDIVLVE CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCEEEEE SGMGIDRATAATDALVAAASPVAILSFGFGGAALPGLKVGDLAVGMTSWFAGTEGIVLRR CCCCCCHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCEECHHHHHHHHHHCCCCCEEEEC GIDRNLAEKLAEELNRICNGVTRGEIITSARILKKGDLAHSLPNGISSPILDMETAAVAE CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHH AAHRRGIPIVALRAISDDAEEELSFSLDEFTDDDMAIRPRKVLATIARKPWIIPQLLRLA HHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH RNSRIAGKRLAQGVLATAEFLSRG HCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]