Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222486
Identifier: 78222486
GI number: 78222486
Start: 1433225
End: 1434268
Strand: Direct
Name: 78222486
Synonym: Gmet_1272
Alternate gene names: NA
Gene position: 1433225-1434268 (Clockwise)
Preceding gene: 78222485
Following gene: 78222487
Centisome position: 35.85
GC content: 56.8
Gene sequence:
>1044_bases ATGTCTATTGAAAAAAAGGTCGGATTTTTCTTTATAGCCGGACTTGTGCTTCTCGGGGTGATGCTGGAGCTTGGGGAGAA ATGGAATCCCTTTCAAAAGGCCATTCCGTACAAAACCTACCTTTCAAGCACCACAGGTCTCAAGTTGGGCGATCCGGTCC GGCTAGCGGGAGTGGAGGTCGGCAAGATCACGAAAATTGCCATTGCCGACAGCCGGGTTGAAGTGGCTTTCGAGGTGAAG CCCGGTACTGCCATCAAAGCCGATTCGGTGGCAACCATCCGGCTCACCAACCTCCTCGGAGGTCAGTTCCTCGGTCTCTC CTTCGGGTCGCCCGACGCACCGGTGCTACCGCCCGGCAGTGCGGTCAAGAGCCGTGAGACCGCCAATATCGACGTCATCG TGGATAACGTAGGTGACCTCGCCAAGGACGCAAAAGTCTTGATCAAGGACCTGACCGTCAATCAGAAGGAGGTGTTTCAG AAGGTCTCCTCCATGCTTGACGAAAACCGGGGGAACCTGCGGGGCGCCATCGAAAACATGAACAGTATCACCACCAAGAT GGACCGGGGACAAGGATCGCTGGCCCTCCTTCTCAACGACAAATCCCTCTACCGCAACACCAACGAGCTGGCGGCGAGCA TGAAGAACGTCACCGCGAAGATCGAGAAGGGGGAGGGGAGCCTCGGCAAGTTCGTCAACGACGATGCCTTCTACCGTGAT GCCAAGGGGGCCGTGGCGAATCTGAACGACGGAGCCAAGGACATCAAGGAGATTGCCGCCAAGATCAACCGGGGTGAGGG GAGTGTTGGCAAGCTCGTGAACGACGAGAGCCTCTACAATGAGCTCCGGGACGCTTCAAAGAACGTCGGAGAGGTCGCCA AAAAAATCAACAATGGGCAAGGTACCCTCGGCAAGCTCGTGAATGACGATACCCTGTACCGCGACACCACGGCAGCCATG AAGAAGCTGGACAAGGCGACCGAGGGGCTGTCCGACACGGGCCCCATTTCAGTCATCGGAAGCATGGTGGGGACGTTGTT CTAG
Upstream 100 bases:
>100_bases TCTGCTCTGAACAGTCGATTTCAATCGGGGAATTTCATGGTTTGCGAAAATGGTGTGCAATGCGGCCGCCCAGGCCGGTG CGGAGGGGGCGCGAGGTATT
Downstream 100 bases:
>100_bases CGCGAAGAACGGATGAAATGTAAAACATGAGGTACTATTGGGGCGCGGGGTCGCATGATGCGGCTTCCGCGCTTCGTTTG TCAGGAGGGATGAATGGAGG
Product: virulence factor MCE-like protein-related protein
Products: NA
Alternate protein names: Mce Family Protein; Virulence Factor MCE-Like Protein-Related Protein; Virulence Factor Mce Family Protein; Mce-Related Protein; Mce Related Protein; Mammalian Cell Entry Related Domain-Containing Protein; ABC-Type Transport System
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSIEKKVGFFFIAGLVLLGVMLELGEKWNPFQKAIPYKTYLSSTTGLKLGDPVRLAGVEVGKITKIAIADSRVEVAFEVK PGTAIKADSVATIRLTNLLGGQFLGLSFGSPDAPVLPPGSAVKSRETANIDVIVDNVGDLAKDAKVLIKDLTVNQKEVFQ KVSSMLDENRGNLRGAIENMNSITTKMDRGQGSLALLLNDKSLYRNTNELAASMKNVTAKIEKGEGSLGKFVNDDAFYRD AKGAVANLNDGAKDIKEIAAKINRGEGSVGKLVNDESLYNELRDASKNVGEVAKKINNGQGTLGKLVNDDTLYRDTTAAM KKLDKATEGLSDTGPISVIGSMVGTLF
Sequences:
>Translated_347_residues MSIEKKVGFFFIAGLVLLGVMLELGEKWNPFQKAIPYKTYLSSTTGLKLGDPVRLAGVEVGKITKIAIADSRVEVAFEVK PGTAIKADSVATIRLTNLLGGQFLGLSFGSPDAPVLPPGSAVKSRETANIDVIVDNVGDLAKDAKVLIKDLTVNQKEVFQ KVSSMLDENRGNLRGAIENMNSITTKMDRGQGSLALLLNDKSLYRNTNELAASMKNVTAKIEKGEGSLGKFVNDDAFYRD AKGAVANLNDGAKDIKEIAAKINRGEGSVGKLVNDESLYNELRDASKNVGEVAKKINNGQGTLGKLVNDDTLYRDTTAAM KKLDKATEGLSDTGPISVIGSMVGTLF >Mature_346_residues SIEKKVGFFFIAGLVLLGVMLELGEKWNPFQKAIPYKTYLSSTTGLKLGDPVRLAGVEVGKITKIAIADSRVEVAFEVKP GTAIKADSVATIRLTNLLGGQFLGLSFGSPDAPVLPPGSAVKSRETANIDVIVDNVGDLAKDAKVLIKDLTVNQKEVFQK VSSMLDENRGNLRGAIENMNSITTKMDRGQGSLALLLNDKSLYRNTNELAASMKNVTAKIEKGEGSLGKFVNDDAFYRDA KGAVANLNDGAKDIKEIAAKINRGEGSVGKLVNDESLYNELRDASKNVGEVAKKINNGQGTLGKLVNDDTLYRDTTAAMK KLDKATEGLSDTGPISVIGSMVGTLF
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37030; Mature: 36899
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEKKVGFFFIAGLVLLGVMLELGEKWNPFQKAIPYKTYLSSTTGLKLGDPVRLAGVEV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHCCCCCCCCCCCEEEECCEE GKITKIAIADSRVEVAFEVKPGTAIKADSVATIRLTNLLGGQFLGLSFGSPDAPVLPPGS CCEEEEEEECCCEEEEEEECCCCEEECCCEEEEEEHHHHCCCEEEEECCCCCCCCCCCCC AVKSRETANIDVIVDNVGDLAKDAKVLIKDLTVNQKEVFQKVSSMLDENRGNLRGAIENM CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH NSITTKMDRGQGSLALLLNDKSLYRNTNELAASMKNVTAKIEKGEGSLGKFVNDDAFYRD HHHHHHHCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHC AKGAVANLNDGAKDIKEIAAKINRGEGSVGKLVNDESLYNELRDASKNVGEVAKKINNGQ CCCCEECCCCCHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCC GTLGKLVNDDTLYRDTTAAMKKLDKATEGLSDTGPISVIGSMVGTLF CHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SIEKKVGFFFIAGLVLLGVMLELGEKWNPFQKAIPYKTYLSSTTGLKLGDPVRLAGVEV CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHCCCCCCCCCCCEEEECCEE GKITKIAIADSRVEVAFEVKPGTAIKADSVATIRLTNLLGGQFLGLSFGSPDAPVLPPGS CCEEEEEEECCCEEEEEEECCCCEEECCCEEEEEEHHHHCCCEEEEECCCCCCCCCCCCC AVKSRETANIDVIVDNVGDLAKDAKVLIKDLTVNQKEVFQKVSSMLDENRGNLRGAIENM CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH NSITTKMDRGQGSLALLLNDKSLYRNTNELAASMKNVTAKIEKGEGSLGKFVNDDAFYRD HHHHHHHCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHC AKGAVANLNDGAKDIKEIAAKINRGEGSVGKLVNDESLYNELRDASKNVGEVAKKINNGQ CCCCEECCCCCHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCC GTLGKLVNDDTLYRDTTAAMKKLDKATEGLSDTGPISVIGSMVGTLF CHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA