Click here to switch to the map view.

The map label for this gene is 78222439

Identifier: 78222439

GI number: 78222439

Start: 1379642

End: 1381813

Strand: Direct

Name: 78222439

Synonym: Gmet_1224

Alternate gene names: NA

Gene position: 1379642-1381813 (Clockwise)

Preceding gene: 78222438

Following gene: 78222440

Centisome position: 34.51

GC content: 63.08

Gene sequence:

>2172_bases
ATGCTCTGGATAACCTCCGTGCAACTCCCCGCCTTTGGCCGTTTCGGGGGGGAGGAGTTCACCTTCCGCCGGGGTATGAA
CCTGGTGTGCGGCAAGAACGAGGCGGGGAAGTCAACGCTCCTGGCTGCCATTGCCGGGACCATCTTCGGCTTCCGGAGAG
AAAAGGACCGGTTCGTCCCCTGGGGCGGTGGTGAACGTTGCGAGGCCCGGGTGAGCTTCGCCTATGACGACCGGGAAATG
ACCATCGTCCGCGATTTCCTAACCGACCGGGTCCAGGCGGTGGAGCGTTCCGGAGACAGGCTCCTGTGGCGGTTCGAGGG
AAAGGTCTCTCCGGCGGGGCGGAGCAGCGAGCGGGAGGAGTACCTGGCGAAGATCGAGGAGGTCTGGGGCTTTGCCGAGG
GGGATATCTTTCGGAACTCGGTCTTCGTGGGCCAACGGGACCTGAAGATCGAGGGGGACGGCGCCCTCACCACCCGGATC
AAACAGCTCCTCTCGGGTTTCTCCGAAATGGATTACGACGCGGTGGTGGACAGCCTCGAAAAGGAGCTCTACGAGTTGAC
CAGACGCCCCGGCGGGAGGGCCAAGGATCGTGAGTTGGAAGAGGTGCGCGCTCGGATGGCCGAGTTGGCCGAGGCCTGGC
GCTCGGCCAGTCGGACCATGGAGGAAGTCTGCAAGGCGGAAGCGGAGCTGGCGGAGCTTCGGGGCTTCATCGACGCCAGC
CGGGCCGACCTGGAGAAGGGGGAGAAGTACCTTCAACGGGTGAAAAAGTACCATGAGGCCACGGTCCGTGAAGCGGTGCT
GAGCAAGGAGTTCGACCGTATCCAGACGGAGCGGGAAAAGGTGGAGGCCCTTGAGGCGCAGCGGAGGACCATTGAGGCAC
GGCTTGCCCCCCTGGGGAATCTGACGGAATTGCCCGATGGCTTCGACAGGACCATCGAGGCCTACTGCGCCGCCAGCGTG
CGGCTGGAGCAGCTTGAAGAGGAGATGGCAGGGCTGACCGTGGAGGCAGATGATGTTCGCAAAGTGCCTCTCGGGCTGCT
TCTGTCACCCATTCTCGCGTGGGGGGCGGCTGTTGCGGCTTGGTTCCTCGTGCCCGCCACTGCCTACGTGGTGACCGGCA
TTGCCCTTGCGGCGACCCTGGCCGTTGTTGTCTATGCCGCCCGGTTGAGCAGCGCGCGCAATGCCAATGCAGCCCGCCGC
CAGGGGAGGATCGACGGCCTCGCTGTCGAGATCGACCGACTACGCAGCGAGGCAGCCCGTCACGGGGGAGCGGTTGCGGA
GCATCTTGGCGACATCGACCCGGCCAGCGCCCGGGGGATTCTTGAGGAGATGGAAGGAGTCGAGGAGATCGTTGCCGAGC
GCGACCAGGTGGCAAGCGCCCTCAAGGTGCTCTCTCCTTTGGACGATCTCAAGGCTCAGGGAGCGGAGCTAGCTCGGGAG
TTGGCCGTGGTGCGGGAAACCATGGAAAGCGTTGTCGGCAAGGGGTTTCCGGTCATGTCACACGAGGAGTTCACCGCCGC
CGAGGCGAAGATGCAGCGGCTGGCCGGGGAGGTGAAGGAGAAGGAGCGGGCCGCCCTCGTCAAGGAGCAGGAGTTGGCGG
TACTTCGCACGGGGGGGCTCGACCTTGAGGCCATCGCCGAGGAGGGAGAAGAACTCAAGTCCCGTGAGCAGCGACTCGTG
CGGCGGACCGGCGCGTTGCGGCTCGCCGTGGAGCTTCTGCGGGAAACCCTCGATGAATACCGGGCCACGTACCTGGCACG
GCTCTCCTCGGAGATCAACGGGAAGCTCTATAACCTCACGGCCGGCAGGTATCGCGAGGCCCGTCTCGACGACAATTTCA
ACCTCACTATCGGCGCCGACGGTGAGCTCAGGCCGGCAGAGGCCTACAGTTGCGGAGTCCAGGACCAGGCCTATCTTGCC
TCCCGGCTTGCCCTGGGGGGGATACTCTCTCGGGGGAGAAAATTGCCTTTTCTTCTCGACGACCCTTTGGTAAATTTTGA
TGACGAGCGAAAAACTGCCGTTCTGGTTACACTTAACCTCATTGCTTCAGGCCACCAGGTCATCCTCTTTGTTCATGACG
AACGCTATCTCCGGCTCAAGGGGGCAGACCTCTGGCATCGAATCCGAATCGACATGAAAGGAAAACCGGATGGACAACTG
CATCTTCTGTAA

Upstream 100 bases:

>100_bases
ATGCCCGGTTCGAGAAAGCGGAATCCGAGGCCGAGCAGGAACTCTGCCGCGATGCCCTGAAGCTCGTCATGGGCCGCTTC
ATGCGAGGGGGGGGAGACTG

Downstream 100 bases:

>100_bases
GATCATCAACGGGACCATTCCCGCCAGGAAGGTCTACGAAGACGACGACCTCGTCGCCATCGAGGACATCAACCCGGTCG
CACCGCACCATATCCTGCTC

Product: nuclease SbcCD subunit C

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 723; Mature: 723

Protein sequence:

>723_residues
MLWITSVQLPAFGRFGGEEFTFRRGMNLVCGKNEAGKSTLLAAIAGTIFGFRREKDRFVPWGGGERCEARVSFAYDDREM
TIVRDFLTDRVQAVERSGDRLLWRFEGKVSPAGRSSEREEYLAKIEEVWGFAEGDIFRNSVFVGQRDLKIEGDGALTTRI
KQLLSGFSEMDYDAVVDSLEKELYELTRRPGGRAKDRELEEVRARMAELAEAWRSASRTMEEVCKAEAELAELRGFIDAS
RADLEKGEKYLQRVKKYHEATVREAVLSKEFDRIQTEREKVEALEAQRRTIEARLAPLGNLTELPDGFDRTIEAYCAASV
RLEQLEEEMAGLTVEADDVRKVPLGLLLSPILAWGAAVAAWFLVPATAYVVTGIALAATLAVVVYAARLSSARNANAARR
QGRIDGLAVEIDRLRSEAARHGGAVAEHLGDIDPASARGILEEMEGVEEIVAERDQVASALKVLSPLDDLKAQGAELARE
LAVVRETMESVVGKGFPVMSHEEFTAAEAKMQRLAGEVKEKERAALVKEQELAVLRTGGLDLEAIAEEGEELKSREQRLV
RRTGALRLAVELLRETLDEYRATYLARLSSEINGKLYNLTAGRYREARLDDNFNLTIGADGELRPAEAYSCGVQDQAYLA
SRLALGGILSRGRKLPFLLDDPLVNFDDERKTAVLVTLNLIASGHQVILFVHDERYLRLKGADLWHRIRIDMKGKPDGQL
HLL

Sequences:

>Translated_723_residues
MLWITSVQLPAFGRFGGEEFTFRRGMNLVCGKNEAGKSTLLAAIAGTIFGFRREKDRFVPWGGGERCEARVSFAYDDREM
TIVRDFLTDRVQAVERSGDRLLWRFEGKVSPAGRSSEREEYLAKIEEVWGFAEGDIFRNSVFVGQRDLKIEGDGALTTRI
KQLLSGFSEMDYDAVVDSLEKELYELTRRPGGRAKDRELEEVRARMAELAEAWRSASRTMEEVCKAEAELAELRGFIDAS
RADLEKGEKYLQRVKKYHEATVREAVLSKEFDRIQTEREKVEALEAQRRTIEARLAPLGNLTELPDGFDRTIEAYCAASV
RLEQLEEEMAGLTVEADDVRKVPLGLLLSPILAWGAAVAAWFLVPATAYVVTGIALAATLAVVVYAARLSSARNANAARR
QGRIDGLAVEIDRLRSEAARHGGAVAEHLGDIDPASARGILEEMEGVEEIVAERDQVASALKVLSPLDDLKAQGAELARE
LAVVRETMESVVGKGFPVMSHEEFTAAEAKMQRLAGEVKEKERAALVKEQELAVLRTGGLDLEAIAEEGEELKSREQRLV
RRTGALRLAVELLRETLDEYRATYLARLSSEINGKLYNLTAGRYREARLDDNFNLTIGADGELRPAEAYSCGVQDQAYLA
SRLALGGILSRGRKLPFLLDDPLVNFDDERKTAVLVTLNLIASGHQVILFVHDERYLRLKGADLWHRIRIDMKGKPDGQL
HLL
>Mature_723_residues
MLWITSVQLPAFGRFGGEEFTFRRGMNLVCGKNEAGKSTLLAAIAGTIFGFRREKDRFVPWGGGERCEARVSFAYDDREM
TIVRDFLTDRVQAVERSGDRLLWRFEGKVSPAGRSSEREEYLAKIEEVWGFAEGDIFRNSVFVGQRDLKIEGDGALTTRI
KQLLSGFSEMDYDAVVDSLEKELYELTRRPGGRAKDRELEEVRARMAELAEAWRSASRTMEEVCKAEAELAELRGFIDAS
RADLEKGEKYLQRVKKYHEATVREAVLSKEFDRIQTEREKVEALEAQRRTIEARLAPLGNLTELPDGFDRTIEAYCAASV
RLEQLEEEMAGLTVEADDVRKVPLGLLLSPILAWGAAVAAWFLVPATAYVVTGIALAATLAVVVYAARLSSARNANAARR
QGRIDGLAVEIDRLRSEAARHGGAVAEHLGDIDPASARGILEEMEGVEEIVAERDQVASALKVLSPLDDLKAQGAELARE
LAVVRETMESVVGKGFPVMSHEEFTAAEAKMQRLAGEVKEKERAALVKEQELAVLRTGGLDLEAIAEEGEELKSREQRLV
RRTGALRLAVELLRETLDEYRATYLARLSSEINGKLYNLTAGRYREARLDDNFNLTIGADGELRPAEAYSCGVQDQAYLA
SRLALGGILSRGRKLPFLLDDPLVNFDDERKTAVLVTLNLIASGHQVILFVHDERYLRLKGADLWHRIRIDMKGKPDGQL
HLL

Specific function: Unknown

COG id: COG4717

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80571; Mature: 80571

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWITSVQLPAFGRFGGEEFTFRRGMNLVCGKNEAGKSTLLAAIAGTIFGFRREKDRFVP
CEEEEEECCCCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
WGGGERCEARVSFAYDDREMTIVRDFLTDRVQAVERSGDRLLWRFEGKVSPAGRSSEREE
CCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHH
YLAKIEEVWGFAEGDIFRNSVFVGQRDLKIEGDGALTTRIKQLLSGFSEMDYDAVVDSLE
HHHHHHHHHCCCCCCHHHCEEEECCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
KELYELTRRPGGRAKDRELEEVRARMAELAEAWRSASRTMEEVCKAEAELAELRGFIDAS
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RADLEKGEKYLQRVKKYHEATVREAVLSKEFDRIQTEREKVEALEAQRRTIEARLAPLGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LTELPDGFDRTIEAYCAASVRLEQLEEEMAGLTVEADDVRKVPLGLLLSPILAWGAAVAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHH
WFLVPATAYVVTGIALAATLAVVVYAARLSSARNANAARRQGRIDGLAVEIDRLRSEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
HGGAVAEHLGDIDPASARGILEEMEGVEEIVAERDQVASALKVLSPLDDLKAQGAELARE
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LAVVRETMESVVGKGFPVMSHEEFTAAEAKMQRLAGEVKEKERAALVKEQELAVLRTGGL
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
DLEAIAEEGEELKSREQRLVRRTGALRLAVELLRETLDEYRATYLARLSSEINGKLYNLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
AGRYREARLDDNFNLTIGADGELRPAEAYSCGVQDQAYLASRLALGGILSRGRKLPFLLD
CCCCHHCCCCCCCEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEC
DPLVNFDDERKTAVLVTLNLIASGHQVILFVHDERYLRLKGADLWHRIRIDMKGKPDGQL
CCCCCCCCCCCEEEEEEEEHHHCCCEEEEEEECCCEEEEECCCEEEEEEEEECCCCCCCE
HLL
ECC
>Mature Secondary Structure
MLWITSVQLPAFGRFGGEEFTFRRGMNLVCGKNEAGKSTLLAAIAGTIFGFRREKDRFVP
CEEEEEECCCCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
WGGGERCEARVSFAYDDREMTIVRDFLTDRVQAVERSGDRLLWRFEGKVSPAGRSSEREE
CCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHH
YLAKIEEVWGFAEGDIFRNSVFVGQRDLKIEGDGALTTRIKQLLSGFSEMDYDAVVDSLE
HHHHHHHHHCCCCCCHHHCEEEECCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
KELYELTRRPGGRAKDRELEEVRARMAELAEAWRSASRTMEEVCKAEAELAELRGFIDAS
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RADLEKGEKYLQRVKKYHEATVREAVLSKEFDRIQTEREKVEALEAQRRTIEARLAPLGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LTELPDGFDRTIEAYCAASVRLEQLEEEMAGLTVEADDVRKVPLGLLLSPILAWGAAVAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHH
WFLVPATAYVVTGIALAATLAVVVYAARLSSARNANAARRQGRIDGLAVEIDRLRSEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
HGGAVAEHLGDIDPASARGILEEMEGVEEIVAERDQVASALKVLSPLDDLKAQGAELARE
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LAVVRETMESVVGKGFPVMSHEEFTAAEAKMQRLAGEVKEKERAALVKEQELAVLRTGGL
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
DLEAIAEEGEELKSREQRLVRRTGALRLAVELLRETLDEYRATYLARLSSEINGKLYNLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
AGRYREARLDDNFNLTIGADGELRPAEAYSCGVQDQAYLASRLALGGILSRGRKLPFLLD
CCCCHHCCCCCCCEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEC
DPLVNFDDERKTAVLVTLNLIASGHQVILFVHDERYLRLKGADLWHRIRIDMKGKPDGQL
CCCCCCCCCCCEEEEEEEEHHHCCCEEEEEEECCCEEEEECCCEEEEEEEEECCCCCCCE
HLL
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA