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The map label for this gene is tnpA [H]

Identifier: 78222400

GI number: 78222400

Start: 1316646

End: 1317740

Strand: Direct

Name: tnpA [H]

Synonym: Gmet_1185

Alternate gene names: 78222400

Gene position: 1316646-1317740 (Clockwise)

Preceding gene: 78222398

Following gene: 78222402

Centisome position: 32.94

GC content: 55.53

Gene sequence:

>1095_bases
ATGGTGTGTGGCTCGTGCGGTGGGCGTTGCACAAGCGTCCATGAAACGACCAAGCGCGTAATTCGAGATTTGCCGATTCT
CGATGCTCAGACTTATCTGATCGTTCACCGCCGCAGGCTGCTGTGCCCTCAGTGTGGGCCAACGCTGGAGCGTCTGTCAT
GGCTGGCGAAATACGCCCGCGTGACGCGCAGGCTTGCAGAGAGCGTAGCGCGACTGTGTGGTGTCGTGTCTGTGAAGCAC
GTGGCGCAGTATCTGGGGCTTTCTTGGGACCAGGTGAAGGAAATCGACAAGCGCTCACTCACAGAGCGGGTCGGCACCGT
CGACCTCTCAAACATCGAAGTTCTCGGGATGGATGAGTTCGCCCTTCACAAGGGGCACCGCTATGCGACGGTTATCATCG
AGCCATACCGTAAGGAAGTCTTATGGATCGGCAAAGGCAGGAGTCGCGAGAGTATCCGTCCTTTCTTCACGCAGCTTGGC
CCACATGGCTGTAAACGGCTCAAAGCGGTCGTGATGGATATGAACGCATCATATGAGGAGGAAATCAAGCAGCACTCGCC
CCAGGCAGACATAGTCTACGACCTGTTCCATGTGGTGGCGAAGTATGGCAGGGAAGTGATCGACAGGGTGCGAGTCGATG
AGGCAAACCGCCTGAAGGAAGACAAGAAGGCACGGAAGGTAGTCAAAACATCGCGGTGGTTGCTGCTACGAAACAGCGAG
AACGTCAAGGGCGACGACATGCTTCGCCTCCAGGAACTGTTGGAGGCAAACCGCAGCCTCCTTACGGTCTACCTGCTCAA
AGACGATCTGAAGCAACTGTGGAAGTTTACCTGCATTGAAGAGGCGGGACTATTCTGGGAGCAGTGGCACCAAAGGGCGA
TGGAGAGTGGAATACCGCCACTCATCCTGTTTGCCCGCCGGCTAAAGGGCTATCTCCAAGGAATCCTCAACCACTGCCTC
TGGCCCCTTCACACCGGAATCCTCGAAGGCATCAATAACAAGATCAAGGTGATCAAAAGAATGGCCTACGGCTTCCGGGA
TCACGAATACTTCTTTCTCAAGATCAGAGCCGCTTTCCCCGGAATTCCCGGATGA

Upstream 100 bases:

>100_bases
ATTTTTTGGATCAGTTTACAGGGGGAAGGTCACAAGGCCAAATCACTAACTTCCAAATGGCTGGATGATGGGGGGAAGGT
CAACCCTGTCCCAGGATGAG

Downstream 100 bases:

>100_bases
ACCTGAAAAAAGCCCGGCAATGCCGGGCCTTTTTGGGGTTATGAATGAACGAGTGCTGCTTATACCAGACCGTGAGCGAC
CATGGCGTCAGCTACCTTGA

Product: IS204/IS1001/IS1096/IS1165 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MVCGSCGGRCTSVHETTKRVIRDLPILDAQTYLIVHRRRLLCPQCGPTLERLSWLAKYARVTRRLAESVARLCGVVSVKH
VAQYLGLSWDQVKEIDKRSLTERVGTVDLSNIEVLGMDEFALHKGHRYATVIIEPYRKEVLWIGKGRSRESIRPFFTQLG
PHGCKRLKAVVMDMNASYEEEIKQHSPQADIVYDLFHVVAKYGREVIDRVRVDEANRLKEDKKARKVVKTSRWLLLRNSE
NVKGDDMLRLQELLEANRSLLTVYLLKDDLKQLWKFTCIEEAGLFWEQWHQRAMESGIPPLILFARRLKGYLQGILNHCL
WPLHTGILEGINNKIKVIKRMAYGFRDHEYFFLKIRAAFPGIPG

Sequences:

>Translated_364_residues
MVCGSCGGRCTSVHETTKRVIRDLPILDAQTYLIVHRRRLLCPQCGPTLERLSWLAKYARVTRRLAESVARLCGVVSVKH
VAQYLGLSWDQVKEIDKRSLTERVGTVDLSNIEVLGMDEFALHKGHRYATVIIEPYRKEVLWIGKGRSRESIRPFFTQLG
PHGCKRLKAVVMDMNASYEEEIKQHSPQADIVYDLFHVVAKYGREVIDRVRVDEANRLKEDKKARKVVKTSRWLLLRNSE
NVKGDDMLRLQELLEANRSLLTVYLLKDDLKQLWKFTCIEEAGLFWEQWHQRAMESGIPPLILFARRLKGYLQGILNHCL
WPLHTGILEGINNKIKVIKRMAYGFRDHEYFFLKIRAAFPGIPG
>Mature_364_residues
MVCGSCGGRCTSVHETTKRVIRDLPILDAQTYLIVHRRRLLCPQCGPTLERLSWLAKYARVTRRLAESVARLCGVVSVKH
VAQYLGLSWDQVKEIDKRSLTERVGTVDLSNIEVLGMDEFALHKGHRYATVIIEPYRKEVLWIGKGRSRESIRPFFTQLG
PHGCKRLKAVVMDMNASYEEEIKQHSPQADIVYDLFHVVAKYGREVIDRVRVDEANRLKEDKKARKVVKTSRWLLLRNSE
NVKGDDMLRLQELLEANRSLLTVYLLKDDLKQLWKFTCIEEAGLFWEQWHQRAMESGIPPLILFARRLKGYLQGILNHCL
WPLHTGILEGINNKIKVIKRMAYGFRDHEYFFLKIRAAFPGIPG

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 42149; Mature: 42149

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCGSCGGRCTSVHETTKRVIRDLPILDAQTYLIVHRRRLLCPQCGPTLERLSWLAKYAR
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VTRRLAESVARLCGVVSVKHVAQYLGLSWDQVKEIDKRSLTERVGTVDLSNIEVLGMDEF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHH
ALHKGHRYATVIIEPYRKEVLWIGKGRSRESIRPFFTQLGPHGCKRLKAVVMDMNASYEE
HHHCCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHH
EIKQHSPQADIVYDLFHVVAKYGREVIDRVRVDEANRLKEDKKARKVVKTSRWLLLRNSE
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEECCC
NVKGDDMLRLQELLEANRSLLTVYLLKDDLKQLWKFTCIEEAGLFWEQWHQRAMESGIPP
CCCCHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LILFARRLKGYLQGILNHCLWPLHTGILEGINNKIKVIKRMAYGFRDHEYFFLKIRAAFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCC
GIPG
CCCC
>Mature Secondary Structure
MVCGSCGGRCTSVHETTKRVIRDLPILDAQTYLIVHRRRLLCPQCGPTLERLSWLAKYAR
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VTRRLAESVARLCGVVSVKHVAQYLGLSWDQVKEIDKRSLTERVGTVDLSNIEVLGMDEF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHH
ALHKGHRYATVIIEPYRKEVLWIGKGRSRESIRPFFTQLGPHGCKRLKAVVMDMNASYEE
HHHCCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHH
EIKQHSPQADIVYDLFHVVAKYGREVIDRVRVDEANRLKEDKKARKVVKTSRWLLLRNSE
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEECCC
NVKGDDMLRLQELLEANRSLLTVYLLKDDLKQLWKFTCIEEAGLFWEQWHQRAMESGIPP
CCCCHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LILFARRLKGYLQGILNHCLWPLHTGILEGINNKIKVIKRMAYGFRDHEYFFLKIRAAFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCC
GIPG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]