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The map label for this gene is trpH [H]

Identifier: 78188459

GI number: 78188459

Start: 560773

End: 561633

Strand: Reverse

Name: trpH [H]

Synonym: Cag_0481

Alternate gene names: 78188459

Gene position: 561633-560773 (Counterclockwise)

Preceding gene: 78188460

Following gene: 78188458

Centisome position: 21.84

GC content: 42.97

Gene sequence:

>861_bases
ATGCCATACAGCACGTCAAGTGTAGGGCATAATGGCTTTCAGAAAGCAGACTTACATATACATACGAAATGCTCAGATGG
CTTATTTACTCCCGAAGAAATTGTTGAAAAAGCCGCTCGTATTGGCTTAAACGCCATTAGCATTACTGATCATGATTCTG
TTTTAGGCATTGACAAAGCAAAGCCATTAGCCTTAGAAAAAGGTGTTGAACTTATTGCGGGTGTCGAAATGAGTTCAACC
TACAAGGGTTATGATATTCATATCCTTGGTTATTTTTTTGATTATCAGCACTCTGAGCTGAAAGATTATCTTGACCATTG
CCGCCAATTGCGCACCGATCGAGCCGAGCGTATGGTAAGTAAGCTTGCAAAAATGGGCGTTAAAATCGGCATTGAGCAAA
TTATTGTTAAAGCGCAAAATGGTAGCGTTGGCAGACCGCATATTGCAGCCGTATTGCAAGATGGTGGCTATGTAAAAAGC
TTTAGCGAAGCCTTTAGCAAATATCTTGGTGCCCATAGCCCTGCGTATGTAAAAAGTGTGGAAACGCATCCCGCCGATAT
TATTCGGCTTATTAACAAAGCCTCGGGCTTGTCGTTTCTTGCGCATCCCGCACAAAATGTGCCCGATGAAGTACTCAAGC
AACTCATTACGCTTGGGCTGGATGGCATTGAAATTATCCATCCCTCGCACGATACCTATCGGCAGAACTATTACCGTGAA
ATTGCCAACGAATACTTTTTGCTCTTTTCAGGCGGTTCCGACTATCACGGCATAAGAGAGCGTGATGAGGATTTATTTGG
TAAAGTTACCATTCCCTACGACTGGGTAAAAAAAATGAAAAGTCGGCTCATGCTCGCTTAA

Upstream 100 bases:

>100_bases
GCTATTCAGCCTTAAAAGAATTCCGATTTTGAACCAAAGCGGGCAAAAAATTTTTCTTATATACCAGCATCACTATTTAA
CCACTTTTAACAATCCAGCC

Downstream 100 bases:

>100_bases
ACGGCATGGCTCATGCTGTAACTCTTTTTTTCTCTTTGGATTTTTTCCATGCCACTATCGTTTGCAAGAACAAGCATCAA
TAAGCTCTCAGCACAGGCGA

Product: phosphoesterase PHP-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MPYSTSSVGHNGFQKADLHIHTKCSDGLFTPEEIVEKAARIGLNAISITDHDSVLGIDKAKPLALEKGVELIAGVEMSST
YKGYDIHILGYFFDYQHSELKDYLDHCRQLRTDRAERMVSKLAKMGVKIGIEQIIVKAQNGSVGRPHIAAVLQDGGYVKS
FSEAFSKYLGAHSPAYVKSVETHPADIIRLINKASGLSFLAHPAQNVPDEVLKQLITLGLDGIEIIHPSHDTYRQNYYRE
IANEYFLLFSGGSDYHGIRERDEDLFGKVTIPYDWVKKMKSRLMLA

Sequences:

>Translated_286_residues
MPYSTSSVGHNGFQKADLHIHTKCSDGLFTPEEIVEKAARIGLNAISITDHDSVLGIDKAKPLALEKGVELIAGVEMSST
YKGYDIHILGYFFDYQHSELKDYLDHCRQLRTDRAERMVSKLAKMGVKIGIEQIIVKAQNGSVGRPHIAAVLQDGGYVKS
FSEAFSKYLGAHSPAYVKSVETHPADIIRLINKASGLSFLAHPAQNVPDEVLKQLITLGLDGIEIIHPSHDTYRQNYYRE
IANEYFLLFSGGSDYHGIRERDEDLFGKVTIPYDWVKKMKSRLMLA
>Mature_285_residues
PYSTSSVGHNGFQKADLHIHTKCSDGLFTPEEIVEKAARIGLNAISITDHDSVLGIDKAKPLALEKGVELIAGVEMSSTY
KGYDIHILGYFFDYQHSELKDYLDHCRQLRTDRAERMVSKLAKMGVKIGIEQIIVKAQNGSVGRPHIAAVLQDGGYVKSF
SEAFSKYLGAHSPAYVKSVETHPADIIRLINKASGLSFLAHPAQNVPDEVLKQLITLGLDGIEIIHPSHDTYRQNYYREI
ANEYFLLFSGGSDYHGIRERDEDLFGKVTIPYDWVKKMKSRLMLA

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=247, Percent_Identity=30.7692307692308, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31983; Mature: 31852

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYSTSSVGHNGFQKADLHIHTKCSDGLFTPEEIVEKAARIGLNAISITDHDSVLGIDKA
CCCCCCCCCCCCCEECCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCEECCCCC
KPLALEKGVELIAGVEMSSTYKGYDIHILGYFFDYQHSELKDYLDHCRQLRTDRAERMVS
CCHHHHHCCHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLAKMGVKIGIEQIIVKAQNGSVGRPHIAAVLQDGGYVKSFSEAFSKYLGAHSPAYVKSV
HHHHHHHHHCHHHHEEECCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHCCCCCHHHHHC
ETHPADIIRLINKASGLSFLAHPAQNVPDEVLKQLITLGLDGIEIIHPSHDTYRQNYYRE
CCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
IANEYFLLFSGGSDYHGIRERDEDLFGKVTIPYDWVKKMKSRLMLA
HHCCEEEEEECCCCCCCCHHCCHHHHEEEECCHHHHHHHHHHCCCC
>Mature Secondary Structure 
PYSTSSVGHNGFQKADLHIHTKCSDGLFTPEEIVEKAARIGLNAISITDHDSVLGIDKA
CCCCCCCCCCCCEECCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCEECCCCC
KPLALEKGVELIAGVEMSSTYKGYDIHILGYFFDYQHSELKDYLDHCRQLRTDRAERMVS
CCHHHHHCCHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLAKMGVKIGIEQIIVKAQNGSVGRPHIAAVLQDGGYVKSFSEAFSKYLGAHSPAYVKSV
HHHHHHHHHCHHHHEEECCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHCCCCCHHHHHC
ETHPADIIRLINKASGLSFLAHPAQNVPDEVLKQLITLGLDGIEIIHPSHDTYRQNYYRE
CCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
IANEYFLLFSGGSDYHGIRERDEDLFGKVTIPYDWVKKMKSRLMLA
HHCCEEEEEECCCCCCCCHHCCHHHHEEEECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]